| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is moxX [H]
Identifier: 220914880
GI number: 220914880
Start: 254131
End: 254766
Strand: Reverse
Name: moxX [H]
Synonym: Mnod_8027
Alternate gene names: 220914880
Gene position: 254766-254131 (Counterclockwise)
Preceding gene: 220914881
Following gene: 220914879
Centisome position: 55.62
GC content: 61.16
Gene sequence:
>636_bases ATGTCCGGGAGCGTTCTGATCATCGACGATCATCCCGTGGTCCTGCAGGGGTGCCGGGTTGTCCTGGAGGATGCCGGGCT CGCGACGATCCACGTCGCCACCGGCGTGGAGGAGGGCTACCAGAGCTTCTACCGCAACCGGCCCGGCCTGGTGGTGGCCG ACCTGACTTTCCAGGACAGTGGCCTCACCGGTCTCTCGCTGATCCGGCGGATCCGCGCGCTCGAACCGGCGACTCGCATC CTCGTGTTCAGCATGCATGACGACCCGGTGATCGTCGCCCGCGCGCTGGAGGGCGGCGCGATCGGCTATCTTCTCAAAGA TACTCCCTCGGTCGACTTTGCCACTGCCGTCGCACGGGTCCAGGCCGGCGAGCCTTACATCGATCATCGCCTCGCAATGA AGGTGGCAATCCTCCAGAGCAGCCAGCGAGTGAGTCCGCTCTTGGCCCTCACCGGACGAGAGTTGCAAATCTTCTTGCTT CTTTCGCGAGGTAAATCTTACGAAATGATCGCCAAATACCTCAGTCTGAGTTATAAGACGGTGGCTAATACGTGCTCCAG CATGCGGCGCAAGCTCGGAGCCGAGAGTCTTTCTGAACTAATCCGCCTTGCAATCAGGCACCACAGCCAGAGCTGA
Upstream 100 bases:
>100_bases GCACCAAGTACGCACCCCAGAGCCTGAAGCAGCCGTGATGATGGCCGCCACGCCAACCCGAATGCGCTCCAACCGAACAG CGCGGCAGCGGGAGGTGAAC
Downstream 100 bases:
>100_bases TCCCGAGTGAAAAGGTCCGATTCAAGGCACTTCAATCTGCGACATATCTAAACAGGGAGATGATTTCGTGGTGCGGCTCG CCATAACAGTCTTGATATTT
Product: two component transcriptional regulator, LuxR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSGSVLIIDDHPVVLQGCRVVLEDAGLATIHVATGVEEGYQSFYRNRPGLVVADLTFQDSGLTGLSLIRRIRALEPATRI LVFSMHDDPVIVARALEGGAIGYLLKDTPSVDFATAVARVQAGEPYIDHRLAMKVAILQSSQRVSPLLALTGRELQIFLL LSRGKSYEMIAKYLSLSYKTVANTCSSMRRKLGAESLSELIRLAIRHHSQS
Sequences:
>Translated_211_residues MSGSVLIIDDHPVVLQGCRVVLEDAGLATIHVATGVEEGYQSFYRNRPGLVVADLTFQDSGLTGLSLIRRIRALEPATRI LVFSMHDDPVIVARALEGGAIGYLLKDTPSVDFATAVARVQAGEPYIDHRLAMKVAILQSSQRVSPLLALTGRELQIFLL LSRGKSYEMIAKYLSLSYKTVANTCSSMRRKLGAESLSELIRLAIRHHSQS >Mature_210_residues SGSVLIIDDHPVVLQGCRVVLEDAGLATIHVATGVEEGYQSFYRNRPGLVVADLTFQDSGLTGLSLIRRIRALEPATRIL VFSMHDDPVIVARALEGGAIGYLLKDTPSVDFATAVARVQAGEPYIDHRLAMKVAILQSSQRVSPLLALTGRELQIFLLL SRGKSYEMIAKYLSLSYKTVANTCSSMRRKLGAESLSELIRLAIRHHSQS
Specific function: Member of the two-component regulatory system moxY/moxX probably involved in the regulation of the methanol dehydrogenase expression [H]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788222, Length=207, Percent_Identity=31.4009661835749, Blast_Score=100, Evalue=5e-23, Organism=Escherichia coli, GI1786747, Length=202, Percent_Identity=28.2178217821782, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788546, Length=202, Percent_Identity=30.1980198019802, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1790102, Length=204, Percent_Identity=31.3725490196078, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1787473, Length=183, Percent_Identity=30.6010928961749, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1788521, Length=194, Percent_Identity=27.319587628866, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1788712, Length=204, Percent_Identity=24.5098039215686, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 23061; Mature: 22930
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSVLIIDDHPVVLQGCRVVLEDAGLATIHVATGVEEGYQSFYRNRPGLVVADLTFQDS CCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECCC GLTGLSLIRRIRALEPATRILVFSMHDDPVIVARALEGGAIGYLLKDTPSVDFATAVARV CCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHH QAGEPYIDHRLAMKVAILQSSQRVSPLLALTGRELQIFLLLSRGKSYEMIAKYLSLSYKT CCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH VANTCSSMRRKLGAESLSELIRLAIRHHSQS HHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGSVLIIDDHPVVLQGCRVVLEDAGLATIHVATGVEEGYQSFYRNRPGLVVADLTFQDS CCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECCC GLTGLSLIRRIRALEPATRILVFSMHDDPVIVARALEGGAIGYLLKDTPSVDFATAVARV CCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHH QAGEPYIDHRLAMKVAILQSSQRVSPLLALTGRELQIFLLLSRGKSYEMIAKYLSLSYKT CCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH VANTCSSMRRKLGAESLSELIRLAIRHHSQS HHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8392137 [H]