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The map label for this gene is ybbM [C]

Identifier: 220914851

GI number: 220914851

Start: 218737

End: 219528

Strand: Reverse

Name: ybbM [C]

Synonym: Mnod_7995

Alternate gene names: 220914851

Gene position: 219528-218737 (Counterclockwise)

Preceding gene: 220914852

Following gene: 220914850

Centisome position: 47.92

GC content: 71.72

Gene sequence:

>792_bases
ATGACCCCGATCACCCTCAGCGCCACCGACCTCGCGCTCGCGGCGTCGCTCGTCGTCCTGGATGCGGGCCTCTCGCTCGC
CCTGCGCCTCAACCTCCACCGCCAACTCGTGCTGGCGGCCGCGCGCATGGTCGTTCAGCTGATCGGCGTGGGGTACCTGC
TGCGCTTCGTCTTCGCGCTGAACGATCCGGTGGCGACGCTGCTGCTCGTGCTGGTGATGAGCCTCGTGGCCGCCCGGGAG
GTCGCCGCGCGGCCCGAGCGGCGCTTCCGGGGCTTTGTCACGCTGGCGATCAGCCTCGGCAGCGTCCTCGTTGCCACCCT
GGCGACCGCCGGCCTCGCCCTGTCGACGGCGATCCGCCCGACGCCCTGGTACGATCCCCGCTACGCCGTCCCGCTCGCCG
GCATCGTTCTGGGATCGGTGCTCAACGCGGCCAGCCTGACGCTCGACAGCCTGCTCGGAGGCGTGCGGCGTGAGCGCAGC
GCCATCGAGGCCCAGCTCGGGCTCGGCGTGCCGTTCCGGCAGGCTGCCGCGGGCCTCTTCCGCACGGCCGTGCGCCGCGG
CCTGCTGCCGATCATCAACCAGATGTCGGCTGCGGGCATCATCACGCTGCCCGGGATCATGACGGGCCAGATCCTGGCCG
GAATGGATCCCGTCGAGGCGGTGAAGTACCAGATCCTGCTCCTGTTCCTGCTGACGGGCGCGAGTGGCCTCGCGGCGCTG
GCCACGGCCGGTCTTGCTCTTCGCTGCCTGACGGACGACAGGCAGCGCCTGCGCCTCGACCGCCTCGCGTGA

Upstream 100 bases:

>100_bases
CCGGAGCGATCATCCTGATGGTCTCCCATGATCCCGGTCAGAGCGAGCGTCTGAGCGCACGGGCCCTGCGCATGGCGGCG
CGTCGGCTGGAGGCGGTGCC

Downstream 100 bases:

>100_bases
GCCTTACGGTCCGGAACCTGCACGGCCAACGCCGCGGCTGCCGCTTGACATCGCGCGCCGCGAAGGTCTTTTCTCCCACT
ATCGGGAAGCGATCTCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTPITLSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFALNDPVATLLLVLVMSLVAARE
VAARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRPTPWYDPRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERS
AIEAQLGLGVPFRQAAAGLFRTAVRRGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAAL
ATAGLALRCLTDDRQRLRLDRLA

Sequences:

>Translated_263_residues
MTPITLSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFALNDPVATLLLVLVMSLVAARE
VAARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRPTPWYDPRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERS
AIEAQLGLGVPFRQAAAGLFRTAVRRGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAAL
ATAGLALRCLTDDRQRLRLDRLA
>Mature_262_residues
TPITLSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFALNDPVATLLLVLVMSLVAAREV
AARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRPTPWYDPRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERSA
IEAQLGLGVPFRQAAAGLFRTAVRRGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAALA
TAGLALRCLTDDRQRLRLDRLA

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=264, Percent_Identity=32.5757575757576, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27662; Mature: 27530

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPITLSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFAL
CCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDPVATLLLVLVMSLVAAREVAARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRP
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPWYDPRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERSAIEAQLGLGVPFRQAAAGLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RTAVRRGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAAL
HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
ATAGLALRCLTDDRQRLRLDRLA
HHHHHHEEEECCCHHHHHHHCCC
>Mature Secondary Structure 
TPITLSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFAL
CCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDPVATLLLVLVMSLVAAREVAARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRP
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPWYDPRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERSAIEAQLGLGVPFRQAAAGLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RTAVRRGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAAL
HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
ATAGLALRCLTDDRQRLRLDRLA
HHHHHHEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]