Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 220914733

GI number: 220914733

Start: 76023

End: 76886

Strand: Reverse

Name: omp31 [H]

Synonym: Mnod_7845

Alternate gene names: 220914733

Gene position: 76886-76023 (Counterclockwise)

Preceding gene: 220914734

Following gene: 220914731

Centisome position: 16.78

GC content: 69.44

Gene sequence:

>864_bases
ATGATCAGAAAGCTCTTGCTCACCAGCGCGGCCACCGCCCTCCTGACGGGCGCTGCGTCTGCTGCCGACCTGCCGCGCCG
CGAGCCTCCCCCGCCGCCGGTGTTCACGCCGGTGCCGGTGTTCACCTGGACCGGCTTCTACGCCGGTTTCAACGCCGGTT
ACGGCTTCGACACCGGTCCCAACCGCGGGCCCACGGTGATTGGCGTCGGCCCGGCCACCGGCCTCGTCATCGTTCCGACC
GTCATCGCCTTCCGGAACGAGAGCAACCTGGACGGCTTCACCGGCGGCGGCCAGATCGGCTACAACTACCAGTTCACGCC
GGGCGCGGGCGTGGTGATCGGTCTCGAGGCCGACGCCCAGTACGTCGACTTCGGCCGTGACCGGAACCGCTTCATCGCCA
CCGGCCCGATCGCCGCCCAGCGGGTGTTCAACCCGGCCGGCCTCGCCGGTCTCGACTTCTTCGGCACGGTGCGCGGCCGG
CTCGGCTACGCCTGGGATCGCACCCTGATCTACGGCACCGGCGGTTTCGCCTATGGCAGCGGCGGCGGCCGCGACTTCGG
CCTGCCCAACGACGACGACTTCCAGACCGGCTGGACCGCCGGTGGTGGCGTCGAGTACGCCCTGCCCACCGACTCGTTCC
TGAACTTCTTCCGGTCGAGCTCGGTGACGGTGAAGGTCGAAGGTCTGTACGTGAACCTGGACCGTGGCCGGCGCTTCAAC
GGCGCCTTCGCGGTGAACAACGCCGGCGCCATCATCACGACGGCGAGCCCGGGCGTGGTCGTGGTGAACGCCGGTCAGTT
CCGCCGCGACACCGAGTTCGCGGTGGTCCGCGCCGGCCTGAACTACAAGTTCGGCACCTGGTAG

Upstream 100 bases:

>100_bases
GGCGCAGCTGCACTAGCCAGAGGTTGGCAATCAACGCTGTGATCGTCTTGCAACTCCCACGGAGGGAACTTGCAGCTCCT
GCGAAAGGGACCAGGACCAG

Downstream 100 bases:

>100_bases
TCGGTGGCCGACAACGGTTCGGCTGAAGCGTCCCCAGACCCCGATCAAATCTGGCCGCTTGGCCGAACGGCGCCCCGGGT
CCTCCCGGGGCGCTTGTGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIRKLLLTSAATALLTGAASAADLPRREPPPPPVFTPVPVFTWTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPT
VIAFRNESNLDGFTGGGQIGYNYQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGR
LGYAWDRTLIYGTGGFAYGSGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFLNFFRSSSVTVKVEGLYVNLDRGRRFN
GAFAVNNAGAIITTASPGVVVVNAGQFRRDTEFAVVRAGLNYKFGTW

Sequences:

>Translated_287_residues
MIRKLLLTSAATALLTGAASAADLPRREPPPPPVFTPVPVFTWTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPT
VIAFRNESNLDGFTGGGQIGYNYQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGR
LGYAWDRTLIYGTGGFAYGSGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFLNFFRSSSVTVKVEGLYVNLDRGRRFN
GAFAVNNAGAIITTASPGVVVVNAGQFRRDTEFAVVRAGLNYKFGTW
>Mature_287_residues
MIRKLLLTSAATALLTGAASAADLPRREPPPPPVFTPVPVFTWTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPT
VIAFRNESNLDGFTGGGQIGYNYQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGR
LGYAWDRTLIYGTGGFAYGSGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFLNFFRSSSVTVKVEGLYVNLDRGRRFN
GAFAVNNAGAIITTASPGVVVVNAGQFRRDTEFAVVRAGLNYKFGTW

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 30313; Mature: 30313

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKLLLTSAATALLTGAASAADLPRREPPPPPVFTPVPVFTWTGFYAGFNAGYGFDTGP
CCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCC
NRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYNYQFTPGAGVVIGLEADAQ
CCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEECEEEEECCCCCEEEEECCCCE
YVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLGYAWDRTLIYGTGGFAYGS
EEECCCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCEEEEECCCEEECC
GGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFLNFFRSSSVTVKVEGLYVNLDRGRRFN
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEC
GAFAVNNAGAIITTASPGVVVVNAGQFRRDTEFAVVRAGLNYKFGTW
CEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MIRKLLLTSAATALLTGAASAADLPRREPPPPPVFTPVPVFTWTGFYAGFNAGYGFDTGP
CCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCC
NRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYNYQFTPGAGVVIGLEADAQ
CCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEECEEEEECCCCCEEEEECCCCE
YVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLGYAWDRTLIYGTGGFAYGS
EEECCCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHCCCCEEECCEEEEECCCEEECC
GGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFLNFFRSSSVTVKVEGLYVNLDRGRRFN
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEC
GAFAVNNAGAIITTASPGVVVVNAGQFRRDTEFAVVRAGLNYKFGTW
CEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]