Click here to switch to the map view.

The map label for this gene is 220914715

Identifier: 220914715

GI number: 220914715

Start: 55794

End: 56318

Strand: Reverse

Name: 220914715

Synonym: Mnod_7826

Alternate gene names: NA

Gene position: 56318-55794 (Counterclockwise)

Preceding gene: 220914716

Following gene: 220914714

Centisome position: 12.29

GC content: 60.95

Gene sequence:

>525_bases
ATGAACGACAAAGCAGATGTTAGCACATCGCAGCCAGGGGCAGATACAATCGAACTGGTCGCCGCGATCATTTCCGCTTA
CGTGTCGAATAACATCGTGCCTCCGGCTGACCTGCCGGCCCTGATCGCGACTGCGGGCCAGACGCTTGGTGAGTTGGGCA
AACCCTCCGCGCCTGCTGCGGAAGAGACGCCGAAGCTGACTGCCGCTCAGATCCGGAAGTCCGTCACACCAGACCACATC
ATCAGCTTCATCGATGGTAAGCCTTACAAGGCGATGAAGCGGCACCTGACCAAGAATGGTCTGACTCCGGCCGAGTACCG
CCAGACGTATGGCTTGCCGGGTGACTATCCGATTGTGGCGCCAAACTATGCGGCTCAGCGCTCGGAACTCGCCAAGAGCC
TGGGCCTCGGCCAGTTGCGCCGGAAGATGGCCGAGAAGCGAGCGGCAGACGAAGCTAAGGGGAGCGCACCCGCTGGCTCA
AAGAAAGGACGTGGGCGTCCTCGCAGGGCTGCCGCCTCAGAGTAA

Upstream 100 bases:

>100_bases
ACTTAGTATTAGTCCATAAGTTCGACTGCAGGTTATCGCCTCGCAATATTGACTGTCAAATAAATCGCGTTAAAACTACA
TCGTTTCGGAGATTTCATCC

Downstream 100 bases:

>100_bases
GGCGTCCAAGGTTGGCACCGCTTCGTCAAGGTTTGTTGCCCTGCCGTTCACCGCGCTTCTTAGCTGACGGTTCAAGGTTG
CCTCCTATTTTGCCCCTACG

Product: transcriptional regulator, MucR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MNDKADVSTSQPGADTIELVAAIISAYVSNNIVPPADLPALIATAGQTLGELGKPSAPAAEETPKLTAAQIRKSVTPDHI
ISFIDGKPYKAMKRHLTKNGLTPAEYRQTYGLPGDYPIVAPNYAAQRSELAKSLGLGQLRRKMAEKRAADEAKGSAPAGS
KKGRGRPRRAAASE

Sequences:

>Translated_174_residues
MNDKADVSTSQPGADTIELVAAIISAYVSNNIVPPADLPALIATAGQTLGELGKPSAPAAEETPKLTAAQIRKSVTPDHI
ISFIDGKPYKAMKRHLTKNGLTPAEYRQTYGLPGDYPIVAPNYAAQRSELAKSLGLGQLRRKMAEKRAADEAKGSAPAGS
KKGRGRPRRAAASE
>Mature_174_residues
MNDKADVSTSQPGADTIELVAAIISAYVSNNIVPPADLPALIATAGQTLGELGKPSAPAAEETPKLTAAQIRKSVTPDHI
ISFIDGKPYKAMKRHLTKNGLTPAEYRQTYGLPGDYPIVAPNYAAQRSELAKSLGLGQLRRKMAEKRAADEAKGSAPAGS
KKGRGRPRRAAASE

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008807 [H]

Pfam domain/function: PF05443 ROS_MUCR [H]

EC number: NA

Molecular weight: Translated: 18317; Mature: 18317

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00354 HMGI_Y

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKADVSTSQPGADTIELVAAIISAYVSNNIVPPADLPALIATAGQTLGELGKPSAPAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
EETPKLTAAQIRKSVTPDHIISFIDGKPYKAMKRHLTKNGLTPAEYRQTYGLPGDYPIVA
CCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEC
PNYAAQRSELAKSLGLGQLRRKMAEKRAADEAKGSAPAGSKKGRGRPRRAAASE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDKADVSTSQPGADTIELVAAIISAYVSNNIVPPADLPALIATAGQTLGELGKPSAPAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
EETPKLTAAQIRKSVTPDHIISFIDGKPYKAMKRHLTKNGLTPAEYRQTYGLPGDYPIVA
CCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEC
PNYAAQRSELAKSLGLGQLRRKMAEKRAADEAKGSAPAGSKKGRGRPRRAAASE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]