| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914683
Identifier: 220914683
GI number: 220914683
Start: 15055
End: 15381
Strand: Reverse
Name: 220914683
Synonym: Mnod_7787
Alternate gene names: NA
Gene position: 15381-15055 (Counterclockwise)
Preceding gene: 220914684
Following gene: 220914682
Centisome position: 3.36
GC content: 72.17
Gene sequence:
>327_bases ATGACGAAGCACACGCCCCCCTTCTCCGCCGAGGTCCGCGAGCGGGCGGTGCGGATGGTGCTGGAGTACCAGGGCGAGCA CGGCTCGCAGGACGCGGCGATCCGCTCGATTGCGGCCAAGATCGGCTGCTCGGGCGAGGCGCTGCGCAATTGGGTGCGCC AGGCTGAACGCGACCAGGGCCTGCGGGCCGGGCCGACCACGGGCGAGCGCGCGCGGATCACGGCGCTGGAGCGGGAGAAC CGCGAACTGCGGCAGGCGAACGAGATCCTCAGGAAGGCCAGCGCGTCTTGTGCGATGGCGGAGCTCGACCGCCGGTCGCG GCCATGA
Upstream 100 bases:
>100_bases AACCCGCTCGGGCCAAGCGCCCGTTCATTCGCACCGGGACAGTTGTCCTGTGAACCGCCCCGGGTTTCCCGGAGGCTCCA ACTCTTGCGAGGATGGAGCC
Downstream 100 bases:
>100_bases TCGCCTTCATCGACGAGTACCGCGCGGTCTACGGGGTTGTCCTTCGACAGGCTCAGGATGAGGCCGATCTGCAGAGTTCT GCCGATCGCCCCGTCGACGT
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTKHTPPFSAEVRERAVRMVLEYQGEHGSQDAAIRSIAAKIGCSGEALRNWVRQAERDQGLRAGPTTGERARITALEREN RELRQANEILRKASASCAMAELDRRSRP
Sequences:
>Translated_108_residues MTKHTPPFSAEVRERAVRMVLEYQGEHGSQDAAIRSIAAKIGCSGEALRNWVRQAERDQGLRAGPTTGERARITALEREN RELRQANEILRKASASCAMAELDRRSRP >Mature_107_residues TKHTPPFSAEVRERAVRMVLEYQGEHGSQDAAIRSIAAKIGCSGEALRNWVRQAERDQGLRAGPTTGERARITALERENR ELRQANEILRKASASCAMAELDRRSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12101; Mature: 11970
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHTPPFSAEVRERAVRMVLEYQGEHGSQDAAIRSIAAKIGCSGEALRNWVRQAERDQG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC LRAGPTTGERARITALERENRELRQANEILRKASASCAMAELDRRSRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKHTPPFSAEVRERAVRMVLEYQGEHGSQDAAIRSIAAKIGCSGEALRNWVRQAERDQG CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC LRAGPTTGERARITALERENRELRQANEILRKASASCAMAELDRRSRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]