| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905639
Identifier: 220905639
GI number: 220905639
Start: 2868033
End: 2869313
Strand: Direct
Name: 220905639
Synonym: Ddes_2379
Alternate gene names: NA
Gene position: 2868033-2869313 (Clockwise)
Preceding gene: 220905638
Following gene: 220905640
Centisome position: 99.81
GC content: 55.19
Gene sequence:
>1281_bases ATGCCGGATGGCAGCGGCGGGATGCTCATGCTTTATACCATAAAATATGGCGAGGGCAGTTTACGTGTCGCACTGCCGGA CACGCTTTCCGTTGATGTCTTCACCCCGCGGCAGGCTCCTCCTCTTGCCGATCCGCTTGCCGTCTTTGCCGGAGCACTGG ACAAACCGGAAGGCTGCCCCCGCCTGGAGGAAATGGCCGTGCCGGAATCCATCGCCATTGCACTTCCCGACGAAACACGG CCTTTCCCCATAAAACTGTTGCTGCCTGTATTGTTGAAAAAAATATTCAATGTTTTTCCACAGATTGATCATGGCAATAT ACGTATTGTTGTTGGCGGCGGCCTGCATGAGCCACCAGATGCGGCCCAGTTGCGGCGCATTTTACCGTCGGAGTTGCACG GATACGCCGTTGTAAGCCACGATGCCAAAAATTCGCCCGTACGGCGTATGGGCGTTACCAGCCGTGGGACACCTGTGGAA ATCAATGCGGCCTATGCGGATGCCGATCTTAAAATCGTCATGGGTATGGTGGACGCACATCAGTTTGCCGGGTTCACGGG AGGTGCAAAGGGCGTTGTTGTGGGTTGTGCCTCAGCGGCGATGATCGCCAAAAACCACAGCATGCTGCAGGCTTCCGGCG CGCATGCAGGCAATATTGAGGGCAATCCCGTGCGGGAAGACCTCAATGAGGCTGGAGAAATCGCGGGCGTAACACTGGCC GTCAACGTTGCCCTGACCCCGGAAAAACAGATTGCCGCTCTTTTTGTGGGCAATCCGCCCCGGATAATGCGTTCCGCAGC CCTGGCCACCCGGCGTCTTTACGGCCTCAGACTGGAATCCGCCTATGACATTGTCATTGCTTCCTGCGGTGGAGCGCCCA AGGACATTTGCCTGTATCAGGCACAAAAGGCTCTGGACCCGGCACGGCGCATAGTTGCACCTGCCGGTAAAATTCTGCTG GCGGCGGAATGTTCTCAGGGTATCGGTGATGACAGATACGAAAACTACGTGAGCTGCTTTGCAAACCACGAAACCCTGTT ACGCGACTTTGCCCGGCAGGAATTCAAAATGGGCGCACACAAGGCTTTTCTGTTTTCCCGTGTTGCGGCCTCACATGAGC TTGTGCTGCATACCGCCCTTTCAGATACAGATGTCGCTCGCTGCCTGCTGCAAAAGGGAGACGCGCAGGCCACGCTGGAC AGATGGGTTGAAAAGAATCCGGCTGCAAAGGTAGCAATTCTTACTCACGCCAACTCCATGTTTTTTTATGAAGAAGAATA A
Upstream 100 bases:
>100_bases GGGCAAGCTTTGTAAAACTGCTCAATGTTCCTACCCCTACCGGGCTGTTTTTTTAGATGTTTTTCAAAAATAACACTATA CTGCACATCTGCCATCCGGC
Downstream 100 bases:
>100_bases GCTGCCAGCTATATGACGCCAGTTAAACGCATCAGACACTGCCGTATTTTTTCCATGCCTGGTGTCACTGCCCAGAAAAC CACGTGCTGATAACCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MPDGSGGMLMLYTIKYGEGSLRVALPDTLSVDVFTPRQAPPLADPLAVFAGALDKPEGCPRLEEMAVPESIAIALPDETR PFPIKLLLPVLLKKIFNVFPQIDHGNIRIVVGGGLHEPPDAAQLRRILPSELHGYAVVSHDAKNSPVRRMGVTSRGTPVE INAAYADADLKIVMGMVDAHQFAGFTGGAKGVVVGCASAAMIAKNHSMLQASGAHAGNIEGNPVREDLNEAGEIAGVTLA VNVALTPEKQIAALFVGNPPRIMRSAALATRRLYGLRLESAYDIVIASCGGAPKDICLYQAQKALDPARRIVAPAGKILL AAECSQGIGDDRYENYVSCFANHETLLRDFARQEFKMGAHKAFLFSRVAASHELVLHTALSDTDVARCLLQKGDAQATLD RWVEKNPAAKVAILTHANSMFFYEEE
Sequences:
>Translated_426_residues MPDGSGGMLMLYTIKYGEGSLRVALPDTLSVDVFTPRQAPPLADPLAVFAGALDKPEGCPRLEEMAVPESIAIALPDETR PFPIKLLLPVLLKKIFNVFPQIDHGNIRIVVGGGLHEPPDAAQLRRILPSELHGYAVVSHDAKNSPVRRMGVTSRGTPVE INAAYADADLKIVMGMVDAHQFAGFTGGAKGVVVGCASAAMIAKNHSMLQASGAHAGNIEGNPVREDLNEAGEIAGVTLA VNVALTPEKQIAALFVGNPPRIMRSAALATRRLYGLRLESAYDIVIASCGGAPKDICLYQAQKALDPARRIVAPAGKILL AAECSQGIGDDRYENYVSCFANHETLLRDFARQEFKMGAHKAFLFSRVAASHELVLHTALSDTDVARCLLQKGDAQATLD RWVEKNPAAKVAILTHANSMFFYEEE >Mature_425_residues PDGSGGMLMLYTIKYGEGSLRVALPDTLSVDVFTPRQAPPLADPLAVFAGALDKPEGCPRLEEMAVPESIAIALPDETRP FPIKLLLPVLLKKIFNVFPQIDHGNIRIVVGGGLHEPPDAAQLRRILPSELHGYAVVSHDAKNSPVRRMGVTSRGTPVEI NAAYADADLKIVMGMVDAHQFAGFTGGAKGVVVGCASAAMIAKNHSMLQASGAHAGNIEGNPVREDLNEAGEIAGVTLAV NVALTPEKQIAALFVGNPPRIMRSAALATRRLYGLRLESAYDIVIASCGGAPKDICLYQAQKALDPARRIVAPAGKILLA AECSQGIGDDRYENYVSCFANHETLLRDFARQEFKMGAHKAFLFSRVAASHELVLHTALSDTDVARCLLQKGDAQATLDR WVEKNPAAKVAILTHANSMFFYEEE
Specific function: Unknown
COG id: COG3875
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45648; Mature: 45517
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGSGGMLMLYTIKYGEGSLRVALPDTLSVDVFTPRQAPPLADPLAVFAGALDKPEGCP CCCCCCCEEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC RLEEMAVPESIAIALPDETRPFPIKLLLPVLLKKIFNVFPQIDHGNIRIVVGGGLHEPPD CHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC AAQLRRILPSELHGYAVVSHDAKNSPVRRMGVTSRGTPVEINAAYADADLKIVMGMVDAH HHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHH QFAGFTGGAKGVVVGCASAAMIAKNHSMLQASGAHAGNIEGNPVREDLNEAGEIAGVTLA HHCCCCCCCCEEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEE VNVALTPEKQIAALFVGNPPRIMRSAALATRRLYGLRLESAYDIVIASCGGAPKDICLYQ EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCHHHHHHH AQKALDPARRIVAPAGKILLAAECSQGIGDDRYENYVSCFANHETLLRDFARQEFKMGAH HHHHHCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHH KAFLFSRVAASHELVLHTALSDTDVARCLLQKGDAQATLDRWVEKNPAAKVAILTHANSM HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCEE FFYEEE EEEECC >Mature Secondary Structure PDGSGGMLMLYTIKYGEGSLRVALPDTLSVDVFTPRQAPPLADPLAVFAGALDKPEGCP CCCCCCEEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC RLEEMAVPESIAIALPDETRPFPIKLLLPVLLKKIFNVFPQIDHGNIRIVVGGGLHEPPD CHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC AAQLRRILPSELHGYAVVSHDAKNSPVRRMGVTSRGTPVEINAAYADADLKIVMGMVDAH HHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHH QFAGFTGGAKGVVVGCASAAMIAKNHSMLQASGAHAGNIEGNPVREDLNEAGEIAGVTLA HHCCCCCCCCEEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCEEEEEEE VNVALTPEKQIAALFVGNPPRIMRSAALATRRLYGLRLESAYDIVIASCGGAPKDICLYQ EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCHHHHHHH AQKALDPARRIVAPAGKILLAAECSQGIGDDRYENYVSCFANHETLLRDFARQEFKMGAH HHHHHCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHH KAFLFSRVAASHELVLHTALSDTDVARCLLQKGDAQATLDRWVEKNPAAKVAILTHANSM HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCEE FFYEEE EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA