| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905617
Identifier: 220905617
GI number: 220905617
Start: 2836832
End: 2837947
Strand: Direct
Name: 220905617
Synonym: Ddes_2357
Alternate gene names: NA
Gene position: 2836832-2837947 (Clockwise)
Preceding gene: 220905611
Following gene: 220905634
Centisome position: 98.73
GC content: 56.0
Gene sequence:
>1116_bases ATGCGCTATGTTCACGAAAGGCCGGAATGGCCGACATTCCAATGGGCCATTGCCAAGCTGACGGAGCCGCTTGCCACCAT ACGCCATAAGCAGGGTTTACTCTTGGGCCGGATGAACGCCCTTGGTTTTTCTATCCGAGCTGAGGCCGGATTGGAAACTC TGACGATGGATGTAGTGACGTCCAGCGCCATTGAAGGGGAATCCCTTGATGTGGCTCAGGTGCGCTCTTCGCTGGCCCGC AGGCTTGGCATTGACATCGGGGGGCTTACGCCTGTGAGCAGGAACGTGGAAGGCGTTGTTGAAATGATGCTGGACGCCAC ACAGCGATATGCTGAAACGCTCACGGCTGAACGCCTGTTCGGCTGGCATGCCTCCCTCTTTCCTACTGGCTACGGGGCAT CACGCCGCATTACCGTGGGCGCGTGGCGCAAGCCCGAAGCTGGCCCCATGCAAGTGGTTTCCGGCTACATAGGGCATGAA AAAGTTCACTTTGAGGCCCCGGCAGCGGAACGCCTTGATCTTGAAATGGGCCGCTTTCTGGAGTGGTTCAATACCCCTCA TGAGCTTGACCCGGTGTTGAAAGCCGGAATCGCGCACTTGTGGTTTGTGACCATCCACCCCTTTGAAGACGGCAACGGAC GTATAGCCCGTGCCATTGCCGATTGCGCCTTAGCCCGTGCCGATGACTGCCCGCAACGCTTCTACAGCATGTCCGGGCAG ATTGAGCGAGAACGCAAGGAATATTACGATATTTTGGAACGAACCCAAAAGGGCGGCTTGGACATCACGCCTTGGCTGAG CTGGTTCCTTGACTGTCTTGGACGGGCCATAGAAGGCGCTGACGAAACCCTTGCTGCTGTTATGCACAAGGCCCGCATCT GGCAACATGCCAATCAGCACCCGCTCAACGAGCGCCAGCGCGGCATTATCAACCGCTTACTTGATGGTTTTGAGGGTAAG CTGACCAGTGGAAAATATGCCAAACTGGCAAAGTGTTCACCCGATACCGCCTTACGGGATATTCGGGAATTGATGGCATA CGGAATTTTGCAGCAAGGCGAGAGTGGCGGGCGGAGTACGAGTTATGCCCTGACAGATGTAGCTACCAATCAGTAA
Upstream 100 bases:
>100_bases AGGTTGCGGCGTTTGTCTCTCATTTCCTCCGCAAAGTTTGCGGTGAATGTTGCGTTTGCGGCGAATATCTGCAATATTCA CCGCAAGGAGTGCGGAGATT
Downstream 100 bases:
>100_bases TGCGGGAGCTTCATCCGCTAAGGAAAGTAAAATAACAAACCAGCTTATTTTAGGATAAGGCCAAATTGTAAAATAAGGCT CCCGAATAGCTTGATAGGCC
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRYVHERPEWPTFQWAIAKLTEPLATIRHKQGLLLGRMNALGFSIRAEAGLETLTMDVVTSSAIEGESLDVAQVRSSLAR RLGIDIGGLTPVSRNVEGVVEMMLDATQRYAETLTAERLFGWHASLFPTGYGASRRITVGAWRKPEAGPMQVVSGYIGHE KVHFEAPAAERLDLEMGRFLEWFNTPHELDPVLKAGIAHLWFVTIHPFEDGNGRIARAIADCALARADDCPQRFYSMSGQ IERERKEYYDILERTQKGGLDITPWLSWFLDCLGRAIEGADETLAAVMHKARIWQHANQHPLNERQRGIINRLLDGFEGK LTSGKYAKLAKCSPDTALRDIRELMAYGILQQGESGGRSTSYALTDVATNQ
Sequences:
>Translated_371_residues MRYVHERPEWPTFQWAIAKLTEPLATIRHKQGLLLGRMNALGFSIRAEAGLETLTMDVVTSSAIEGESLDVAQVRSSLAR RLGIDIGGLTPVSRNVEGVVEMMLDATQRYAETLTAERLFGWHASLFPTGYGASRRITVGAWRKPEAGPMQVVSGYIGHE KVHFEAPAAERLDLEMGRFLEWFNTPHELDPVLKAGIAHLWFVTIHPFEDGNGRIARAIADCALARADDCPQRFYSMSGQ IERERKEYYDILERTQKGGLDITPWLSWFLDCLGRAIEGADETLAAVMHKARIWQHANQHPLNERQRGIINRLLDGFEGK LTSGKYAKLAKCSPDTALRDIRELMAYGILQQGESGGRSTSYALTDVATNQ >Mature_371_residues MRYVHERPEWPTFQWAIAKLTEPLATIRHKQGLLLGRMNALGFSIRAEAGLETLTMDVVTSSAIEGESLDVAQVRSSLAR RLGIDIGGLTPVSRNVEGVVEMMLDATQRYAETLTAERLFGWHASLFPTGYGASRRITVGAWRKPEAGPMQVVSGYIGHE KVHFEAPAAERLDLEMGRFLEWFNTPHELDPVLKAGIAHLWFVTIHPFEDGNGRIARAIADCALARADDCPQRFYSMSGQ IERERKEYYDILERTQKGGLDITPWLSWFLDCLGRAIEGADETLAAVMHKARIWQHANQHPLNERQRGIINRLLDGFEGK LTSGKYAKLAKCSPDTALRDIRELMAYGILQQGESGGRSTSYALTDVATNQ
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=224, Percent_Identity=26.3392857142857, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582217, Length=240, Percent_Identity=27.0833333333333, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41493; Mature: 41493
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVHERPEWPTFQWAIAKLTEPLATIRHKQGLLLGRMNALGFSIRAEAGLETLTMDVVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCHHHHHHHHH SSAIEGESLDVAQVRSSLARRLGIDIGGLTPVSRNVEGVVEMMLDATQRYAETLTAERLF HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GWHASLFPTGYGASRRITVGAWRKPEAGPMQVVSGYIGHEKVHFEAPAAERLDLEMGRFL HHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH EWFNTPHELDPVLKAGIAHLWFVTIHPFEDGNGRIARAIADCALARADDCPQRFYSMSGQ HHHCCCHHCCHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC IERERKEYYDILERTQKGGLDITPWLSWFLDCLGRAIEGADETLAAVMHKARIWQHANQH HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC PLNERQRGIINRLLDGFEGKLTSGKYAKLAKCSPDTALRDIRELMAYGILQQGESGGRST CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SYALTDVATNQ CEEEECCCCCC >Mature Secondary Structure MRYVHERPEWPTFQWAIAKLTEPLATIRHKQGLLLGRMNALGFSIRAEAGLETLTMDVVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEEECCCCCHHHHHHHHH SSAIEGESLDVAQVRSSLARRLGIDIGGLTPVSRNVEGVVEMMLDATQRYAETLTAERLF HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GWHASLFPTGYGASRRITVGAWRKPEAGPMQVVSGYIGHEKVHFEAPAAERLDLEMGRFL HHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH EWFNTPHELDPVLKAGIAHLWFVTIHPFEDGNGRIARAIADCALARADDCPQRFYSMSGQ HHHCCCHHCCHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC IERERKEYYDILERTQKGGLDITPWLSWFLDCLGRAIEGADETLAAVMHKARIWQHANQH HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC PLNERQRGIINRLLDGFEGKLTSGKYAKLAKCSPDTALRDIRELMAYGILQQGESGGRST CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SYALTDVATNQ CEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA