| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905584
Identifier: 220905584
GI number: 220905584
Start: 2793434
End: 2795119
Strand: Reverse
Name: 220905584
Synonym: Ddes_2324
Alternate gene names: NA
Gene position: 2795119-2793434 (Counterclockwise)
Preceding gene: 220905586
Following gene: 220905583
Centisome position: 97.27
GC content: 60.91
Gene sequence:
>1686_bases ATGAAATTCGCCATGCGACTGACTTTTGCGGTCTGCCTTGCGCTGTTCGCCGCCGGGCTGGCCACGACAACGCAGGCGGC GGCCAGAAGTGCCGTTGTGCTGCCCTTCACGGTCAACGCGCCGCAAAGTTACAGCTATCTTTCCAAGGCCGTTCCGGCAA CCATCCAGGGCCGCCTGAATCGCCCCGGAGTTCTTGATGTACGCTCCCTCCAGGGCAAGGCCTCTTCACAGGCCGAAGCC GCCAAGGCTATGAATTCCGCCGGGGCGGGCCACGCCATCTGGGGATCTGTCAACGTGATGGGCAACGAGTGCACCATTGA AGTCAACAGCGTGGACAAGGCCGGCAAAACCTGGAGCAAGACCGCCCAGAGCACGGTAAGCGGCCTGACCGGCGCGGTGC AGACCCTGAGCGCCGCCCTGGGGCAGGAAGTTTTCGGCATTGCAGGCGTACGTGCGCCCGGCAGCACGGCTGCAGCGGGA CCGCGCGGCGGCAGCGCCGCTCCCGGGGGTGACATCATCACCAATGAGACCGGCCAGCAGCAGATGTACCTGAACCCGCA GTTCCGCTATCAGGGGTCGGGGGCCAGTGACGGCTCACGCCTGCGCAGCCAGCGCCTGCCCTTTACTATGGTCAGCATGG CCGTGGGTGACTTTAACGGCGATGGCAAGAACGAAATCGCCCTGCTGAGCGAAAATCACCTGCGCATCTATATGTGGGAT CATGACGGCAAGCTCAAGCTTTTGGGCGAAACCCTCATTTCCCGCTCCAACAAAAACTTCTCCATGAAGGCCATCGACCT CAACCGCGACGGCTCTATGGATCTCGTGGTCGCCACCTTTGAGGACGACAGCAATCGCCCCTACAGCTATTTTTACAGTT TCAAGGGCAACAAGTTCACCCAGGTGGCCGAGCGCATCCCCTACTTTGTCAGCGTGGTGCGCCTGCCCCCCACTTTCACG CCCACCCTTGTGGGCCAGGGCTGGGATTCGCTCAAGCTTTTTGCCCCCGGTGTATACACAATGGTGAAAACCGGCGGCAA ATACACCTTCGGCGCGCGGCTTGACCTGCCCACCGGAGCCACGGTCTTTAACGTGGCCTGGCTGCCGGGCGGCAGAAGCG GCAAAGGCGACCAGCTTGTCATGCTCACTGATGATGAACGGCTCAAAGTCTTTCAGGGCAACGGCAACACTCTTGTCCAT ACCACCATGGAGCGCTTCTCCGGCTCCTCCACCGGCATGGATCACTATAAGGGCATGCCCGGCCTTGGCGTAGACAAGAA CTACCAGCTGCCGAGCAAGTATTACGCCCCCATGAATCTTATTGCCGCGGATATCGGCCATACCGGCGAGTACGTCATGC TGGTCAACAAGCCCATATCCACAGCTTCGCAGATGTTTGACCGTTACCGCTACTTCCCGCAGGGCGAAATCCATGCCCTG TACTGGGACGGCGTGGGCCTCGGCCTCAAGTGGAAGACGCGCCGTATTCGCGGCTCCGTAGCGGCTGTGGACCTGGCTGA CGCCACCAACAACGGCGTTCTTGATCTGGTGGTGGGCCTGAATACCTCGCCCGACCTCGGCATCGGCAGCCGCCAGTGCA TGATCACGGCGTACCCGCTGGATGTGTCGGCCACGGACCCCAATACCCCTGCGGATATGAGCGACTTTGAGGTAAATCCC AACTAG
Upstream 100 bases:
>100_bases CCATTTAGTGGAAATGCCCCGCCTGCCGGAAGCGAAAAACGCCTGGTTGGCGCTTCCCTTATTTTACCGGGCATCTTGCC AGATGCCCAAGGAGAACGGA
Downstream 100 bases:
>100_bases GCGTTTACGGGCGCGGGCGGCCCACGCGCACTGCGGCGGCAGCCCGCCCCCGGTAAAGCCCCTTTATGGGGCTTTGCTTT TCATCAGCACACGGCAAGGA
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Protein
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MKFAMRLTFAVCLALFAAGLATTTQAAARSAVVLPFTVNAPQSYSYLSKAVPATIQGRLNRPGVLDVRSLQGKASSQAEA AKAMNSAGAGHAIWGSVNVMGNECTIEVNSVDKAGKTWSKTAQSTVSGLTGAVQTLSAALGQEVFGIAGVRAPGSTAAAG PRGGSAAPGGDIITNETGQQQMYLNPQFRYQGSGASDGSRLRSQRLPFTMVSMAVGDFNGDGKNEIALLSENHLRIYMWD HDGKLKLLGETLISRSNKNFSMKAIDLNRDGSMDLVVATFEDDSNRPYSYFYSFKGNKFTQVAERIPYFVSVVRLPPTFT PTLVGQGWDSLKLFAPGVYTMVKTGGKYTFGARLDLPTGATVFNVAWLPGGRSGKGDQLVMLTDDERLKVFQGNGNTLVH TTMERFSGSSTGMDHYKGMPGLGVDKNYQLPSKYYAPMNLIAADIGHTGEYVMLVNKPISTASQMFDRYRYFPQGEIHAL YWDGVGLGLKWKTRRIRGSVAAVDLADATNNGVLDLVVGLNTSPDLGIGSRQCMITAYPLDVSATDPNTPADMSDFEVNP N
Sequences:
>Translated_561_residues MKFAMRLTFAVCLALFAAGLATTTQAAARSAVVLPFTVNAPQSYSYLSKAVPATIQGRLNRPGVLDVRSLQGKASSQAEA AKAMNSAGAGHAIWGSVNVMGNECTIEVNSVDKAGKTWSKTAQSTVSGLTGAVQTLSAALGQEVFGIAGVRAPGSTAAAG PRGGSAAPGGDIITNETGQQQMYLNPQFRYQGSGASDGSRLRSQRLPFTMVSMAVGDFNGDGKNEIALLSENHLRIYMWD HDGKLKLLGETLISRSNKNFSMKAIDLNRDGSMDLVVATFEDDSNRPYSYFYSFKGNKFTQVAERIPYFVSVVRLPPTFT PTLVGQGWDSLKLFAPGVYTMVKTGGKYTFGARLDLPTGATVFNVAWLPGGRSGKGDQLVMLTDDERLKVFQGNGNTLVH TTMERFSGSSTGMDHYKGMPGLGVDKNYQLPSKYYAPMNLIAADIGHTGEYVMLVNKPISTASQMFDRYRYFPQGEIHAL YWDGVGLGLKWKTRRIRGSVAAVDLADATNNGVLDLVVGLNTSPDLGIGSRQCMITAYPLDVSATDPNTPADMSDFEVNP N >Mature_561_residues MKFAMRLTFAVCLALFAAGLATTTQAAARSAVVLPFTVNAPQSYSYLSKAVPATIQGRLNRPGVLDVRSLQGKASSQAEA AKAMNSAGAGHAIWGSVNVMGNECTIEVNSVDKAGKTWSKTAQSTVSGLTGAVQTLSAALGQEVFGIAGVRAPGSTAAAG PRGGSAAPGGDIITNETGQQQMYLNPQFRYQGSGASDGSRLRSQRLPFTMVSMAVGDFNGDGKNEIALLSENHLRIYMWD HDGKLKLLGETLISRSNKNFSMKAIDLNRDGSMDLVVATFEDDSNRPYSYFYSFKGNKFTQVAERIPYFVSVVRLPPTFT PTLVGQGWDSLKLFAPGVYTMVKTGGKYTFGARLDLPTGATVFNVAWLPGGRSGKGDQLVMLTDDERLKVFQGNGNTLVH TTMERFSGSSTGMDHYKGMPGLGVDKNYQLPSKYYAPMNLIAADIGHTGEYVMLVNKPISTASQMFDRYRYFPQGEIHAL YWDGVGLGLKWKTRRIRGSVAAVDLADATNNGVLDLVVGLNTSPDLGIGSRQCMITAYPLDVSATDPNTPADMSDFEVNP N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60179; Mature: 60179
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAMRLTFAVCLALFAAGLATTTQAAARSAVVLPFTVNAPQSYSYLSKAVPATIQGRLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEECCCC RPGVLDVRSLQGKASSQAEAAKAMNSAGAGHAIWGSVNVMGNECTIEVNSVDKAGKTWSK CCCEEEEHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHH TAQSTVSGLTGAVQTLSAALGQEVFGIAGVRAPGSTAAAGPRGGSAAPGGDIITNETGQQ HHHHHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCE QMYLNPQFRYQGSGASDGSRLRSQRLPFTMVSMAVGDFNGDGKNEIALLSENHLRIYMWD EEEECCCEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEC HDGKLKLLGETLISRSNKNFSMKAIDLNRDGSMDLVVATFEDDSNRPYSYFYSFKGNKFT CCCCEEEEEHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCHHH QVAERIPYFVSVVRLPPTFTPTLVGQGWDSLKLFAPGVYTMVKTGGKYTFGARLDLPTGA HHHHHCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCC TVFNVAWLPGGRSGKGDQLVMLTDDERLKVFQGNGNTLVHTTMERFSGSSTGMDHYKGMP EEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEHHHHCCCCCCCHHHCCCC GLGVDKNYQLPSKYYAPMNLIAADIGHTGEYVMLVNKPISTASQMFDRYRYFPQGEIHAL CCCCCCCCCCCHHHCCCHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEE YWDGVGLGLKWKTRRIRGSVAAVDLADATNNGVLDLVVGLNTSPDLGIGSRQCMITAYPL EECCEECCEEEEEHEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEE DVSATDPNTPADMSDFEVNPN EEECCCCCCCCCCCCCEECCC >Mature Secondary Structure MKFAMRLTFAVCLALFAAGLATTTQAAARSAVVLPFTVNAPQSYSYLSKAVPATIQGRLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCCEEECCCC RPGVLDVRSLQGKASSQAEAAKAMNSAGAGHAIWGSVNVMGNECTIEVNSVDKAGKTWSK CCCEEEEHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHH TAQSTVSGLTGAVQTLSAALGQEVFGIAGVRAPGSTAAAGPRGGSAAPGGDIITNETGQQ HHHHHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCE QMYLNPQFRYQGSGASDGSRLRSQRLPFTMVSMAVGDFNGDGKNEIALLSENHLRIYMWD EEEECCCEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEC HDGKLKLLGETLISRSNKNFSMKAIDLNRDGSMDLVVATFEDDSNRPYSYFYSFKGNKFT CCCCEEEEEHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCHHH QVAERIPYFVSVVRLPPTFTPTLVGQGWDSLKLFAPGVYTMVKTGGKYTFGARLDLPTGA HHHHHCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCC TVFNVAWLPGGRSGKGDQLVMLTDDERLKVFQGNGNTLVHTTMERFSGSSTGMDHYKGMP EEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEHHHHCCCCCCCHHHCCCC GLGVDKNYQLPSKYYAPMNLIAADIGHTGEYVMLVNKPISTASQMFDRYRYFPQGEIHAL CCCCCCCCCCCHHHCCCHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEE YWDGVGLGLKWKTRRIRGSVAAVDLADATNNGVLDLVVGLNTSPDLGIGSRQCMITAYPL EECCEECCEEEEEHEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEE DVSATDPNTPADMSDFEVNPN EEECCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA