| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905497
Identifier: 220905497
GI number: 220905497
Start: 2695025
End: 2696605
Strand: Direct
Name: 220905497
Synonym: Ddes_2235
Alternate gene names: NA
Gene position: 2695025-2696605 (Clockwise)
Preceding gene: 220905496
Following gene: 220905500
Centisome position: 93.79
GC content: 32.76
Gene sequence:
>1581_bases ATGTCTTACAAGTCTTGGATTGATACGTCCTCATTGGATATGAATAATGAAGGGATTAGCTCTATTGTTGCTGAAACCAA TAAAAAGCTTAGCGATTTTGATAAAAATCATTTTGTTTGTGAAGATGGTGGAAAATTTTTTGTTTATACTGAAAAAACTA ATGAAGATGATAAATTCATGTTGACACGTCTTTCATATAAAGATTTTGCATTTAGGTATAATTGCAATGACATATATGTT CCAAGCGGTAAAAAGGATAGCCTTTTTACTAAAAAAGGCATTGCTTCATATTGGATGAGCTGTCCTCAAAAGAGGACATT TAATGGTATAATTTTTAACCCTAAATATAGTGGAAAGAATTTTTATAACTTGTGGCGCGGTTTTAAAATTACTTCTGATT GCGACGGCGAGTTTTCACATATTGAAAGACATCTAAAAGAGGTCTGGTGCAACGGGAATGAAGAACATTATTCATATCTT ATAAAATGGTTTGCTCACATGATTCAATATCCCAGTAAAAAAGCTGGCGTTGCGCTTGTCATAAAGGGTGAGAAAGGCAC GGGCAAAACTGGCTTTATTTCTAAGCTTGCTGAGAAAATTCTTGGAGAACATTATATGTTGGTTAGTTCTTCACATGATA TCTATGGTAACTTTAATTCGCAACAATATGCAAAGTTACTGATAACTTTTGATGAAGCTATTTGGAATGGCGGTAAGAGC ATGGAAGGAAGATTGAAGTCTTTGATTACTGATACAAATATCCTTATTGAAAAAAAGGGTATGGATGCTGAAATCAAGAA AAATTATTCTCGCTATATTCTTTTAACAAATGAGAAGTTTTCTGTACCTGCAACATATGATGAAAGAAGGTTTTTTGCAT TAAGAATAAGCAATGAGCGTAGGAATGACATTAAGTATTTTGACGAGTTATATAAAGCGATGGAACATGAAATAGATAAT TTCTTCGGATTCTTAAAAAAGTTTGATCTTTGTGAAGAAGATGTGTTCACACCTCCTGCCACTTCTGCTTTATTCGAAGA TGTATTTGCAGGTATGGATTTTTTTGATCAATGGCTTTTTAACTTGATTGATGGGTACGTGATCAAACAAGAAAACAGTT TCTATTTATGGGATAATTCCATAGAAAAAATTGGATTTAATAAGCATGTGAGGACTAAAACATTATTTGATAACTTTATG GAGTCTAAAGAAAGGAGTGGTCAGTCATCATTTATTCATACAGTTACTAAATTTACGCAAAAGATGAGCAATGGCAAAAG GGATTCATATAGTTTTATTTATAGAAAATGTGAAGGGCAAAACTGTATATTTTTGCCATCAATTGATGAGGCAAAAAAAA TTTATGAGAAGAAATTCTCTTGTATTGTTGAATGGACTGAACTTAATGAAAGCACCAGAGTTCTTAATTATAAAGAAACT TTAGAGCTGCTTAAAAAAGTTTTAGGCAAAAAATATCGCCAAAAAGATGCCATTAAAACGGCATATCATATGTATAAAGA TAAACAATTCGCGGAGGAGTTTGGGCAGATCTTTGGCTCCAACACTTCTGGCGCGGCATAA
Upstream 100 bases:
>100_bases TTGAGTGTGAAGCTAAACGAATTGTCATTGAATTTTGCTAGGTGATATGGGGGGAATTCTCCCCATAAAAATCAAACTTT ATTAAATTAAGGAGTTTTAT
Downstream 100 bases:
>100_bases CGTGAGATATTCACAGCTAAAATAGCTGAGGCTTGGCACTCAAGGCCCTTTCCTTTTCTCCTTGGAGTTCATGGTAATAG GTATCTGCCGTCATTCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYV PSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYL IKWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDN FFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFM ESKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA
Sequences:
>Translated_526_residues MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYV PSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYL IKWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDN FFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFM ESKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA >Mature_525_residues SYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFMLTRLSYKDFAFRYNCNDIYVP SGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKNFYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLI KWFAHMIQYPSKKAGVALVIKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKSM EGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNERRNDIKYFDELYKAMEHEIDNF FGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLFNLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFME SKERSGQSSFIHTVTKFTQKMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKETL ELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA
Specific function: Unknown
COG id: COG4983
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61530; Mature: 61399
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFM CCCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCEE LTRLSYKDFAFRYNCNDIYVPSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKN EEEECCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCH FYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLIKWFAHMIQYPSKKAGVALV HHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE IKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS EECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHEEEHHHHHCCCCC MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNER HHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC RNDIKYFDELYKAMEHEIDNFFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFMESKERSGQSSFIHTVTKFTQ HHHCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET HHHCCCCCCHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHEEEHHHCCCCHHEECHHHH LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SYKSWIDTSSLDMNNEGISSIVAETNKKLSDFDKNHFVCEDGGKFFVYTEKTNEDDKFM CCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCEE LTRLSYKDFAFRYNCNDIYVPSGKKDSLFTKKGIASYWMSCPQKRTFNGIIFNPKYSGKN EEEECCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCH FYNLWRGFKITSDCDGEFSHIERHLKEVWCNGNEEHYSYLIKWFAHMIQYPSKKAGVALV HHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE IKGEKGTGKTGFISKLAEKILGEHYMLVSSSHDIYGNFNSQQYAKLLITFDEAIWNGGKS EECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHEEEHHHHHCCCCC MEGRLKSLITDTNILIEKKGMDAEIKKNYSRYILLTNEKFSVPATYDERRFFALRISNER HHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC RNDIKYFDELYKAMEHEIDNFFGFLKKFDLCEEDVFTPPATSALFEDVFAGMDFFDQWLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NLIDGYVIKQENSFYLWDNSIEKIGFNKHVRTKTLFDNFMESKERSGQSSFIHTVTKFTQ HHHCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMSNGKRDSYSFIYRKCEGQNCIFLPSIDEAKKIYEKKFSCIVEWTELNESTRVLNYKET HHHCCCCCCHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHEEEHHHCCCCHHEECHHHH LELLKKVLGKKYRQKDAIKTAYHMYKDKQFAEEFGQIFGSNTSGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA