| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is aroK2 [H]
Identifier: 220905443
GI number: 220905443
Start: 2632779
End: 2633387
Strand: Direct
Name: aroK2 [H]
Synonym: Ddes_2181
Alternate gene names: 220905443
Gene position: 2632779-2633387 (Clockwise)
Preceding gene: 220905442
Following gene: 220905444
Centisome position: 91.62
GC content: 66.83
Gene sequence:
>609_bases ATGCCGCTCATCTTTCTCGTAGGCCCCAGAGCCTGCGGCAAAACCACCGTAGGGCGCACCCTGGCCCGGCGGCTTGGCCT GCCCTTTGTGGATACGGACCATTTTCTCCATCACCAGACGGGGCGCACCGTGGCCCAGATAGTCGCAGCCGAGGGCTGGC CCGGCTTCCGCCGCCTCGAAAGCGAGGCCCTGCGCGCCACAGCCGGGCTGCATCAGACTTCCGGGGCCGTTATCGCCACC GGCGGCGGTATGGTCCTGGACGCACAAAACCGCGCCTTCATGCGTGAGCAGGGGTGCGTGTTCTATCTGTCGGCTTCTGC GGAAGCACTGGTCGCCCGTCTGTCGGGCAACCCTCTTGCTGCTCAAAGGCCCTCGCTCACCGGAACCGACATCAGGGAAG AAGTTGCCCAGGTCCTGCAGGAGCGGCTCCCCCTCTATGAACAGACCGCCCACCACCGGCTTGATGCGGCGCTTTCGCCC GGGCGCATCTGCGCACAGGCCCTGACCCTGCTGTGCGGGCCGGACGATCCAGCCGCACCGACTGTGCCGGAAAGCGGCAA GGACATCCCACAAGCCCCCGCTCCGGACGGAGGTGCCACGAGTGCATAG
Upstream 100 bases:
>100_bases CTGGCCCGGACCGCGACCAGTGACCGTCCGGCATACCGACCCGCGCGCGGTCCGATATTTTCTCACTGCGCCACGGGGCG CACAGCCACCAGGAACATTC
Downstream 100 bases:
>100_bases CCTCTTTCCGGATGCCTCCGCCCCCGGGCAGCCGCTGGTTACGGTGCTGTTGCCCGCCTACAACGCCGCCCACACCCTTG AAGCCGCCCTGCACAGCCTT
Product: Shikimate kinase
Products: NA
Alternate protein names: SK 2 [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPLIFLVGPRACGKTTVGRTLARRLGLPFVDTDHFLHHQTGRTVAQIVAAEGWPGFRRLESEALRATAGLHQTSGAVIAT GGGMVLDAQNRAFMREQGCVFYLSASAEALVARLSGNPLAAQRPSLTGTDIREEVAQVLQERLPLYEQTAHHRLDAALSP GRICAQALTLLCGPDDPAAPTVPESGKDIPQAPAPDGGATSA
Sequences:
>Translated_202_residues MPLIFLVGPRACGKTTVGRTLARRLGLPFVDTDHFLHHQTGRTVAQIVAAEGWPGFRRLESEALRATAGLHQTSGAVIAT GGGMVLDAQNRAFMREQGCVFYLSASAEALVARLSGNPLAAQRPSLTGTDIREEVAQVLQERLPLYEQTAHHRLDAALSP GRICAQALTLLCGPDDPAAPTVPESGKDIPQAPAPDGGATSA >Mature_201_residues PLIFLVGPRACGKTTVGRTLARRLGLPFVDTDHFLHHQTGRTVAQIVAAEGWPGFRRLESEALRATAGLHQTSGAVIATG GGMVLDAQNRAFMREQGCVFYLSASAEALVARLSGNPLAAQRPSLTGTDIREEVAQVLQERLPLYEQTAHHRLDAALSPG RICAQALTLLCGPDDPAAPTVPESGKDIPQAPAPDGGATSA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fifth step. [C]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786587, Length=163, Percent_Identity=47.239263803681, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=34.3373493975904, Blast_Score=90, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6320332, Length=153, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 21264; Mature: 21133
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIFLVGPRACGKTTVGRTLARRLGLPFVDTDHFLHHQTGRTVAQIVAAEGWPGFRRLE CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHH SEALRATAGLHQTSGAVIATGGGMVLDAQNRAFMREQGCVFYLSASAEALVARLSGNPLA HHHHHHHHCCCCCCCEEEEECCCEEEECCCCHHHHHCCEEEEEECCHHHHHHHHCCCCCC AQRPSLTGTDIREEVAQVLQERLPLYEQTAHHRLDAALSPGRICAQALTLLCGPDDPAAP CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC TVPESGKDIPQAPAPDGGATSA CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLIFLVGPRACGKTTVGRTLARRLGLPFVDTDHFLHHQTGRTVAQIVAAEGWPGFRRLE CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHHHH SEALRATAGLHQTSGAVIATGGGMVLDAQNRAFMREQGCVFYLSASAEALVARLSGNPLA HHHHHHHHCCCCCCCEEEEECCCEEEECCCCHHHHHCCEEEEEECCHHHHHHHHCCCCCC AQRPSLTGTDIREEVAQVLQERLPLYEQTAHHRLDAALSPGRICAQALTLLCGPDDPAAP CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC TVPESGKDIPQAPAPDGGATSA CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA