| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905414
Identifier: 220905414
GI number: 220905414
Start: 2595567
End: 2596922
Strand: Direct
Name: 220905414
Synonym: Ddes_2152
Alternate gene names: NA
Gene position: 2595567-2596922 (Clockwise)
Preceding gene: 220905413
Following gene: 220905415
Centisome position: 90.33
GC content: 63.2
Gene sequence:
>1356_bases GTGCGTACAGCCATAACGTGTCGCCATCCCCTTGCGCGCATGACGCTTGGCCTGCTGCTGCTCATGCTGCTCGGCTGCCT CAGTGCCTGCAAGATGCCTTTTGGCGGAGGCCAGCGCCCAGCGCCCGCGCCCGTTCAAAGCTCCAAGCCAGAAGCCTGCG TGGCTCTGGCCCTGCCCGCGTCCGGGCAATATGCGCCCATCGGCAACAAGATCCGCCAGGGCGCGCAGATCGCCCAGAAA GAAATGGCCGCCAACGGCGTCAACGTGCGCCTTGAAATAATCAACACCGAAGCCTCGGACTGGCTGCAGAAGATTAACGC CCTGCCCGCCGCCTGTGCTGTGGTGGGCGGCCCCCTGCAGGCATCCGGCTACGCTCAGGCCCGCAAGTCCGGCGCTACGG ACAAGAAAGCTTTTTTCACCTTTCTGCCCTCGCTGGAACAGGGTGACGAAGGTACGCATGCATGGCGCTTTTTTCCCGGC CCGCAGGACCAGATTGATGCCCTTGTCGGCTTTGCCACCGACAGCCTGAACATCCACAGCTACGGAGCCTTCTACCCCAG CGATGCCTATGGCGTGCGCATGACCGGCCTGCTGGAACAAAGCCTGTACAAACGCAACATGCCTCTCCAGAAGGCCGGCT ACAATCCGTCCGATCCCACATCGTGGAGTTCCGCCGCAGCGCCGCTCATCAACGCCCAGACACCTGAAGGCAGCCGCACC CCCGTTCCCCAGACCGCCTTTGAAGCGCTTTTTGTGCCGGATTCGTGGAAAAGTATGGACATGCTGACCACAAGTCTGCT CTATAACGGCGAAGACCGCCTGGTGCTGCTCGGTACGACCCTGTGGGAACAGGGCCTGTACGGCAAGGTGGTCAATTCTC CTGAAAAATTCGCCCTGGCGGTCTTTCCTGCCGCCTGGAATCCGACCCACGCCCCCCGCGCCCTCCAGTCCTCGAGTTCG GACTTCTGGACGGCCCTCGGGTACGATTTTGCCCGTTTCAGCGTCAGCCTCGGCCTGACCTCACGTCTGACCGCGCCGGA AATAACCGCCCGTGCGCAGCGCGCCTCACACATGGTCTGGGGTATGGCTCCCATCACCTGGGACAGCGCGGGCGTGGCGC ATCAGAAGCTCTTTATCTTCGGCGTGTCCCCCACGGGCATGGTTCCCGTCAACGTAGACGAATTCCGGCAGACACGCAGC AATATCCTGCAGCAATCCGCCCTGCGCATGCAGGGTCTGCCGCCCGTGGATGCGGAGGGCAACCCCCTTGCGCCCGACGG GCAGCAGCCGACGTTGCAACCCATCGGCACGACTCCCAGGCCCTCGTACAAGCTGAGCCTGCCGTCGCGCCTGTAG
Upstream 100 bases:
>100_bases CTGTACTAAAAAGGTCTGGCTCCCTGTGAGCCAGACCTTTTGCTTTTTATGGGCAAGGGGCCATCCGGCCCGTGCCAAAA CTCTCCTGCCGGAGGATACA
Downstream 100 bases:
>100_bases GGCTGCCCTATCTTAAAAACTGCTCCCCGCGTGGGTATAGCCGCGCGGGGAGCAGCCGATAACAGCGTTTCGCCGGAACC TGTTACGGCAAAAAATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL
Sequences:
>Translated_451_residues MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL >Mature_451_residues MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPASGQYAPIGNKIRQGAQIAQK EMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPG PQDQIDALVGFATDSLNIHSYGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALAVFPAAWNPTHAPRALQSSSS DFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVWGMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRS NILQQSALRMQGLPPVDAEGNPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48561; Mature: 48561
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00844 DALA_DALA_LIGASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPA CCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC SGQYAPIGNKIRQGAQIAQKEMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQ CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCCC ASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPGPQDQIDALVGFATDSLNIHS CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE YGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT CCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHCCCEEECCCCCCCCC PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALA CCCHHHHHEEECCCCCCHHHHHHHHHEECCCCCEEEEECHHHHCCCCCHHCCCCCEEEEE VFPAAWNPTHAPRALQSSSSDFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVW EEECCCCCCCCCHHHHCCCCCHHHHHCCCEEHEEEEECCCCCCCCCHHHHHHHHHHHHEE GMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRSNILQQSALRMQGLPPVDAEG ECCCEEECCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MRTAITCRHPLARMTLGLLLLMLLGCLSACKMPFGGGQRPAPAPVQSSKPEACVALALPA CCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC SGQYAPIGNKIRQGAQIAQKEMAANGVNVRLEIINTEASDWLQKINALPAACAVVGGPLQ CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCCCC ASGYAQARKSGATDKKAFFTFLPSLEQGDEGTHAWRFFPGPQDQIDALVGFATDSLNIHS CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEE YGAFYPSDAYGVRMTGLLEQSLYKRNMPLQKAGYNPSDPTSWSSAAAPLINAQTPEGSRT CCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHCCCEEECCCCCCCCC PVPQTAFEALFVPDSWKSMDMLTTSLLYNGEDRLVLLGTTLWEQGLYGKVVNSPEKFALA CCCHHHHHEEECCCCCCHHHHHHHHHEECCCCCEEEEECHHHHCCCCCHHCCCCCEEEEE VFPAAWNPTHAPRALQSSSSDFWTALGYDFARFSVSLGLTSRLTAPEITARAQRASHMVW EEECCCCCCCCCHHHHCCCCCHHHHHCCCEEHEEEEECCCCCCCCCHHHHHHHHHHHHEE GMAPITWDSAGVAHQKLFIFGVSPTGMVPVNVDEFRQTRSNILQQSALRMQGLPPVDAEG ECCCEEECCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NPLAPDGQQPTLQPIGTTPRPSYKLSLPSRL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA