| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ilvE [H]
Identifier: 220905405
GI number: 220905405
Start: 2583877
End: 2584797
Strand: Direct
Name: ilvE [H]
Synonym: Ddes_2143
Alternate gene names: 220905405
Gene position: 2583877-2584797 (Clockwise)
Preceding gene: 220905396
Following gene: 220905406
Centisome position: 89.92
GC content: 57.33
Gene sequence:
>921_bases ATGCAAAAGATGAAGTACATCTGGGTTGACGGAAAAATGGTTCCCTGGGACGAAGCCCAGGTTCACGTGCTCACCCATGC CCTGCATTACGGCAGCGCCATTTTCGAGGGCATCCGGGCTTATGCCTGTGCCGACGGCACGTCCGCCATATTCCGCCTTG AAGACCACTGCAAGCGTATGCTCAACTCCGCCAAGATCCTACGCATGAACCTCACTCTTACCGTAGAAGAGCTGGTAAAA GCCTGCGTGGAAACGCTTGAAATCAACAAACTGGCCGAAGGCTATGTGCGTCCGCTTTCTTTCGTGGGCTATGGCGAAAT GGGCGTCTACCCCGGCAACAATCCGGTGCAGACCATTGTAGCCACCTGGCCCTGGGGGGCCTATCTTGGCGCCGAAGCTC TGGAAAAGGGCATTCGCGTCAAAACCAGCACCTTTGCCCGCAGCCATGTGAACACCAGCATGTCCAAGGCCAAGGCCGCA GGCAACTACATCAACTCCATCCTTGCCAAGGTGGAAGCCAAGGACGAAGGCTATGACGAGGCCGTCATGCTGGACACCAG CGGCTATGTGTCTGAAGCCACTGGTGAAAATATCTTTATCGTACGCGACGGCATCATCAAGACCACGCCCTGGACCTCCA TCCTCGGCGGCATCACCCGTGACTCCGTCATGAAGCTGGCCCAGGACCTGGGCTACACGGTGGAAGAACAGCAGTTCACC CGTGACGAAATGTATATTGCCGACGAGGCGTTCTTTACCGGCACCGCGGCGGAAATAACCCCCATCCGCGAGATGGACCA CCGCCAGATCGGCGCCGGACACGCCGGGCCTGTGACCAAGCACCTGCAAACCGAGTACTTCAAGATCGTCAAGGGCCAGA ACCCCAAGTACGCCGGCTGGCTGCACCACTATAAAGTCTAG
Upstream 100 bases:
>100_bases ATATGGGGCGCTTTACAGTAAATTTTTTCTCTTGCGGACTCGACGGCCATGTGTGCCGCCAGTGATGCCGCCCTACTTAT GAGTCTTGCGGAGGACAGTC
Downstream 100 bases:
>100_bases CTCAACAGGCGCGCCCGGCCCGCCGGGCGCGCCGTCAGAAAATCATGAAGCATCTCTCCCTCGCCTCGCGCTACCGCCCC CAGACCTTTGCCCAGGTGGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MQKMKYIWVDGKMVPWDEAQVHVLTHALHYGSAIFEGIRAYACADGTSAIFRLEDHCKRMLNSAKILRMNLTLTVEELVK ACVETLEINKLAEGYVRPLSFVGYGEMGVYPGNNPVQTIVATWPWGAYLGAEALEKGIRVKTSTFARSHVNTSMSKAKAA GNYINSILAKVEAKDEGYDEAVMLDTSGYVSEATGENIFIVRDGIIKTTPWTSILGGITRDSVMKLAQDLGYTVEEQQFT RDEMYIADEAFFTGTAAEITPIREMDHRQIGAGHAGPVTKHLQTEYFKIVKGQNPKYAGWLHHYKV
Sequences:
>Translated_306_residues MQKMKYIWVDGKMVPWDEAQVHVLTHALHYGSAIFEGIRAYACADGTSAIFRLEDHCKRMLNSAKILRMNLTLTVEELVK ACVETLEINKLAEGYVRPLSFVGYGEMGVYPGNNPVQTIVATWPWGAYLGAEALEKGIRVKTSTFARSHVNTSMSKAKAA GNYINSILAKVEAKDEGYDEAVMLDTSGYVSEATGENIFIVRDGIIKTTPWTSILGGITRDSVMKLAQDLGYTVEEQQFT RDEMYIADEAFFTGTAAEITPIREMDHRQIGAGHAGPVTKHLQTEYFKIVKGQNPKYAGWLHHYKV >Mature_306_residues MQKMKYIWVDGKMVPWDEAQVHVLTHALHYGSAIFEGIRAYACADGTSAIFRLEDHCKRMLNSAKILRMNLTLTVEELVK ACVETLEINKLAEGYVRPLSFVGYGEMGVYPGNNPVQTIVATWPWGAYLGAEALEKGIRVKTSTFARSHVNTSMSKAKAA GNYINSILAKVEAKDEGYDEAVMLDTSGYVSEATGENIFIVRDGIIKTTPWTSILGGITRDSVMKLAQDLGYTVEEQQFT RDEMYIADEAFFTGTAAEITPIREMDHRQIGAGHAGPVTKHLQTEYFKIVKGQNPKYAGWLHHYKV
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=285, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI38176287, Length=287, Percent_Identity=25.4355400696864, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI296010904, Length=287, Percent_Identity=25.4355400696864, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI296010906, Length=287, Percent_Identity=25.4355400696864, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI48994963, Length=302, Percent_Identity=48.0132450331126, Blast_Score=303, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17565728, Length=284, Percent_Identity=28.169014084507, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6322002, Length=288, Percent_Identity=25.6944444444444, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322608, Length=283, Percent_Identity=25.7950530035336, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34096; Mature: 34096
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKMKYIWVDGKMVPWDEAQVHVLTHALHYGSAIFEGIRAYACADGTSAIFRLEDHCKRM CCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHH LNSAKILRMNLTLTVEELVKACVETLEINKLAEGYVRPLSFVGYGEMGVYPGNNPVQTIV HCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCEEEE ATWPWGAYLGAEALEKGIRVKTSTFARSHVNTSMSKAKAAGNYINSILAKVEAKDEGYDE EECCCHHHHCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AVMLDTSGYVSEATGENIFIVRDGIIKTTPWTSILGGITRDSVMKLAQDLGYTVEEQQFT EEEEECCCCEECCCCCEEEEEECCEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHC RDEMYIADEAFFTGTAAEITPIREMDHRQIGAGHAGPVTKHLQTEYFKIVKGQNPKYAGW HHHEEEECCCEECCCCCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC LHHYKV HHCCCC >Mature Secondary Structure MQKMKYIWVDGKMVPWDEAQVHVLTHALHYGSAIFEGIRAYACADGTSAIFRLEDHCKRM CCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHH LNSAKILRMNLTLTVEELVKACVETLEINKLAEGYVRPLSFVGYGEMGVYPGNNPVQTIV HCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCEEEE ATWPWGAYLGAEALEKGIRVKTSTFARSHVNTSMSKAKAAGNYINSILAKVEAKDEGYDE EECCCHHHHCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AVMLDTSGYVSEATGENIFIVRDGIIKTTPWTSILGGITRDSVMKLAQDLGYTVEEQQFT EEEEECCCCEECCCCCEEEEEECCEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCHHHHC RDEMYIADEAFFTGTAAEITPIREMDHRQIGAGHAGPVTKHLQTEYFKIVKGQNPKYAGW HHHEEEECCCEECCCCCCCCCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC LHHYKV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]