| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905393
Identifier: 220905393
GI number: 220905393
Start: 2568376
End: 2570184
Strand: Direct
Name: 220905393
Synonym: Ddes_2131
Alternate gene names: NA
Gene position: 2568376-2570184 (Clockwise)
Preceding gene: 220905390
Following gene: 220905394
Centisome position: 89.38
GC content: 64.95
Gene sequence:
>1809_bases ATGACTGACCATTCGAACGACCCGCGCGGCCCGCGGCCCCCCCGGGACAACCGCGAAAAACGTGACTTCCGGGGCCAGGG CGAGGCACGTCCGCGCCGCCCCTTGCGCGAAACCGTTTGCGAAATTGACCGCGACATTTTACGCCTCCTGCTGCGGCGCC ATAATATCCTGACGCGCATGCGCGGCGACAAGCCACGCATGGACGCCGCCGAGGAAAAAATACTGCGTGAATCGTGGGAG GCCGCAGTGGCCCGTATCAGTCGCGACGCCCGCCTCTCGGGCCATTTTTTTTCTCTTATGCAGGAAGTGGAATTTCAACC CCGCCCTGTAAGCGAGCGGCAGGAAAGGCCCGATGGCGAAGGGCATGAGGGTGGCTCCGCCGACGTCGGCCAGTCCCTGG CCGACAGCCCCCGCGAAGGCACCGACAAGCGTATGGCGTTCAACCTGGCCCCGCCGGCCAAGGCCGTGCGCCTGCGCATG CAGGCTCCTCTGGCCTGCCGCGCCACACGCGCGTGGCTCATGCTGGCCGCCGCCACAGGGCAGCCCCTGCGGCTCAGCCC AAGCCTCATGAACGACCCCGTTGTGGACTGTGTAAAAATGCTCAACCAGGCCGGAGCGGCCCTCACCCGCGAGGACGAAG GCGTCACCGCAAGACCCGCTGTTCCCCTGGGCGCACCCGACAAGGTGCTTTATGTGGGCGACAGCGCGTGGAACTTTTTT CTGCTGCTGGGACACTATCTGGGACGCCCATCACGGGCGAAATTCGCGGGCGAGTCCGGCCTGAAACTGGCCGACCTTTC CTCCGTCCGCCACTTTCTGCCCACTATGGGCGCGCGCCTTGTGCATGTGGTCCCCAAGAGCGATGGCCTGCCTGCGCGGC TTGAAAGCTCCGGCATCCTCCCCGACGCTGTAACCATGCCTGCAGATACGCCCGCCGAACTGGCCGAAGGCATTCTGCTG GCAGCGCCCGGCTATGAACACAGCCTGGCCATGGATATCAGCGGCCACCCGGCCCAAAAAACCATACTGGCCCGTACTCT GCCCATCCTGCGGGCAGCCGGAGCAGATGTGGCCGTGGACGGCGGCGTTGTACGCATCCATCCGACAAAGCTGAATATTC CCGCGCAACCACAACTGCCCGTTGAACCGGAACTGGCGCTCTTTCTGCTGGCCTTGCCCCTGGTGCTGGGCGGCGAAACA CGCCTTGCCGGGCAGTGGCCCCAGTGGCCCGCAGCCGAAGCCGGATGGCGCATCCTGCGCGACCTGGGCCTTGACCTGCA GCAGCAGAATGGCAAGGAAGGCGAAGAACTCAACGCGCAAAATACGGCTCCGCTCAAGGCATTCAGCATATCTGCCCTGC CTGCGGACCTGCCCGCGGACTGGTCGCCTCTGGTTGTGGGTCTGGCCGCGTGCGCTGCCCTGCGCGGTGGGCAGACAGTG CTGCCGCCGTTGCCCCAAGGTACGGACATGCACGAGGTAGGAAGCTTCCTGCACTCCGTGGACCTCGAACAGGACGAAAG CGGCAGATTGTGCAAAACAGCACAACCTGAAACCAAGACCGCGTGGAACGCCCCCACGCCCGCATGGGCTATGGCCCTTG CTTTGGCAGCTTGTGCAAAACAGCACCAGAAGCTCGGCAACCCCGGCGTCATGACCGGCCTGTACCCGGCCTTCTGGGCC TTGTATAACGCCCTGCCCGAGCCGCCGCAGCGCCGCGCCGCAGCAACCCCTCCAGCGGCCCCATCCCGCAGGCGCATTAT TACCACTGCTGTGGCCGTGCCGCCGGAAATGAAGGAAGAAGACTACTAG
Upstream 100 bases:
>100_bases GGCGCAGATTTGCTGCGTATTTGCAGCAAACCCCTGCAATTCCACACAACGAAAAGGGATTTAATCACCCCCTCCCTCCT ATTTTCCCACAGGAAAGAGC
Downstream 100 bases:
>100_bases GGCAGTGCCGAAGACAATTTACTTTGAAATGCTCTGTGGGGAGGGACCCCACAGAGCATTTTTACGGTGAAGAGCTTTGT GGGGGAGGGACCCTTTTGCA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: EPSP Synthase; 5-Enolpyruvylshikimate-3-Phosphate Synthase; 3-Phosphoshikimate 1-Carboxyvinyltransferase; Chorismate Mutase; 5-Enolpyruvylshikimate-3-Phosphate Synthase-Like
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MTDHSNDPRGPRPPRDNREKRDFRGQGEARPRRPLRETVCEIDRDILRLLLRRHNILTRMRGDKPRMDAAEEKILRESWE AAVARISRDARLSGHFFSLMQEVEFQPRPVSERQERPDGEGHEGGSADVGQSLADSPREGTDKRMAFNLAPPAKAVRLRM QAPLACRATRAWLMLAAATGQPLRLSPSLMNDPVVDCVKMLNQAGAALTREDEGVTARPAVPLGAPDKVLYVGDSAWNFF LLLGHYLGRPSRAKFAGESGLKLADLSSVRHFLPTMGARLVHVVPKSDGLPARLESSGILPDAVTMPADTPAELAEGILL AAPGYEHSLAMDISGHPAQKTILARTLPILRAAGADVAVDGGVVRIHPTKLNIPAQPQLPVEPELALFLLALPLVLGGET RLAGQWPQWPAAEAGWRILRDLGLDLQQQNGKEGEELNAQNTAPLKAFSISALPADLPADWSPLVVGLAACAALRGGQTV LPPLPQGTDMHEVGSFLHSVDLEQDESGRLCKTAQPETKTAWNAPTPAWAMALALAACAKQHQKLGNPGVMTGLYPAFWA LYNALPEPPQRRAAATPPAAPSRRRIITTAVAVPPEMKEEDY
Sequences:
>Translated_602_residues MTDHSNDPRGPRPPRDNREKRDFRGQGEARPRRPLRETVCEIDRDILRLLLRRHNILTRMRGDKPRMDAAEEKILRESWE AAVARISRDARLSGHFFSLMQEVEFQPRPVSERQERPDGEGHEGGSADVGQSLADSPREGTDKRMAFNLAPPAKAVRLRM QAPLACRATRAWLMLAAATGQPLRLSPSLMNDPVVDCVKMLNQAGAALTREDEGVTARPAVPLGAPDKVLYVGDSAWNFF LLLGHYLGRPSRAKFAGESGLKLADLSSVRHFLPTMGARLVHVVPKSDGLPARLESSGILPDAVTMPADTPAELAEGILL AAPGYEHSLAMDISGHPAQKTILARTLPILRAAGADVAVDGGVVRIHPTKLNIPAQPQLPVEPELALFLLALPLVLGGET RLAGQWPQWPAAEAGWRILRDLGLDLQQQNGKEGEELNAQNTAPLKAFSISALPADLPADWSPLVVGLAACAALRGGQTV LPPLPQGTDMHEVGSFLHSVDLEQDESGRLCKTAQPETKTAWNAPTPAWAMALALAACAKQHQKLGNPGVMTGLYPAFWA LYNALPEPPQRRAAATPPAAPSRRRIITTAVAVPPEMKEEDY >Mature_601_residues TDHSNDPRGPRPPRDNREKRDFRGQGEARPRRPLRETVCEIDRDILRLLLRRHNILTRMRGDKPRMDAAEEKILRESWEA AVARISRDARLSGHFFSLMQEVEFQPRPVSERQERPDGEGHEGGSADVGQSLADSPREGTDKRMAFNLAPPAKAVRLRMQ APLACRATRAWLMLAAATGQPLRLSPSLMNDPVVDCVKMLNQAGAALTREDEGVTARPAVPLGAPDKVLYVGDSAWNFFL LLGHYLGRPSRAKFAGESGLKLADLSSVRHFLPTMGARLVHVVPKSDGLPARLESSGILPDAVTMPADTPAELAEGILLA APGYEHSLAMDISGHPAQKTILARTLPILRAAGADVAVDGGVVRIHPTKLNIPAQPQLPVEPELALFLLALPLVLGGETR LAGQWPQWPAAEAGWRILRDLGLDLQQQNGKEGEELNAQNTAPLKAFSISALPADLPADWSPLVVGLAACAALRGGQTVL PPLPQGTDMHEVGSFLHSVDLEQDESGRLCKTAQPETKTAWNAPTPAWAMALALAACAKQHQKLGNPGVMTGLYPAFWAL YNALPEPPQRRAAATPPAAPSRRRIITTAVAVPPEMKEEDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65262; Mature: 65130
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHSNDPRGPRPPRDNREKRDFRGQGEARPRRPLRETVCEIDRDILRLLLRRHNILTRM CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDKPRMDAAEEKILRESWEAAVARISRDARLSGHFFSLMQEVEFQPRPVSERQERPDGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC GHEGGSADVGQSLADSPREGTDKRMAFNLAPPAKAVRLRMQAPLACRATRAWLMLAAATG CCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHEEEECCC QPLRLSPSLMNDPVVDCVKMLNQAGAALTREDEGVTARPAVPLGAPDKVLYVGDSAWNFF CCEEECCHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHH LLLGHYLGRPSRAKFAGESGLKLADLSSVRHFLPTMGARLVHVVPKSDGLPARLESSGIL HHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCC PDAVTMPADTPAELAEGILLAAPGYEHSLAMDISGHPAQKTILARTLPILRAAGADVAVD CCCCCCCCCCHHHHHCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEC GGVVRIHPTKLNIPAQPQLPVEPELALFLLALPLVLGGETRLAGQWPQWPAAEAGWRILR CCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DLGLDLQQQNGKEGEELNAQNTAPLKAFSISALPADLPADWSPLVVGLAACAALRGGQTV HHCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEE LPPLPQGTDMHEVGSFLHSVDLEQDESGRLCKTAQPETKTAWNAPTPAWAMALALAACAK CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH QHQKLGNPGVMTGLYPAFWALYNALPEPPQRRAAATPPAAPSRRRIITTAVAVPPEMKEE HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC DY CC >Mature Secondary Structure TDHSNDPRGPRPPRDNREKRDFRGQGEARPRRPLRETVCEIDRDILRLLLRRHNILTRM CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDKPRMDAAEEKILRESWEAAVARISRDARLSGHFFSLMQEVEFQPRPVSERQERPDGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC GHEGGSADVGQSLADSPREGTDKRMAFNLAPPAKAVRLRMQAPLACRATRAWLMLAAATG CCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHEEEECCC QPLRLSPSLMNDPVVDCVKMLNQAGAALTREDEGVTARPAVPLGAPDKVLYVGDSAWNFF CCEEECCHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHH LLLGHYLGRPSRAKFAGESGLKLADLSSVRHFLPTMGARLVHVVPKSDGLPARLESSGIL HHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCC PDAVTMPADTPAELAEGILLAAPGYEHSLAMDISGHPAQKTILARTLPILRAAGADVAVD CCCCCCCCCCHHHHHCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEC GGVVRIHPTKLNIPAQPQLPVEPELALFLLALPLVLGGETRLAGQWPQWPAAEAGWRILR CCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH DLGLDLQQQNGKEGEELNAQNTAPLKAFSISALPADLPADWSPLVVGLAACAALRGGQTV HHCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEE LPPLPQGTDMHEVGSFLHSVDLEQDESGRLCKTAQPETKTAWNAPTPAWAMALALAACAK CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH QHQKLGNPGVMTGLYPAFWALYNALPEPPQRRAAATPPAAPSRRRIITTAVAVPPEMKEE HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCC DY CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA