| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is citT [C]
Identifier: 220905356
GI number: 220905356
Start: 2522432
End: 2523832
Strand: Direct
Name: citT [C]
Synonym: Ddes_2094
Alternate gene names: 220905356
Gene position: 2522432-2523832 (Clockwise)
Preceding gene: 220905355
Following gene: 220905357
Centisome position: 87.78
GC content: 58.89
Gene sequence:
>1401_bases ATGCTTGTTAAAACTTCCGACCTTACACCGGCCATGCTGGCAAAATGGGCATTCAGCCTCATACTGCCGCTTGCCGTCTA CTTCGTCATGCCCCGCAGCGAAGCCTTCACCGATCCCATGGCGGCATTTCTGGCCGTCACCCTGTGGGCTGTCATCGCCT GGGCTGTGGACAGCATGAACGAAGTGGCCGTAGGCATTGCCCTGCCCATACTGTACACCCTTTTTTGCGGCGTAAGCCAA AAGGTCGTTTACGGCCCGTGGCTTTCCGAAGTACCCATCATTGTCATAGGCGGATTCACGCTCGGCAAGATCATTCAGGA AACAGGCCTCGGCAAGCGCATCGCCCTCACCTGCGTCAAGCTGACAGGCGGCAGCTTTGCCGGAGCCTTGGCAGGCATGA CACTGGCGGCAGCCATCATCTCTCCACTGGTTCCTTCCATCATGGGCAAGGCAGCCATCATCTGCGCGGTGGCCCTGTCC CTTTGCGATGCGCTGGACTTCAAGCCCAAAAGCCGCGAGGCCACGGCCGTGGTGCTGGCTGCCTGCCTGGCTGTCGGTTC CACAAAGCTTGCCTACCTCACGGGCGCGGGGGACCTTGTCATGGGCATGGGTCTTGTGGACAAGGTGATGGGAACCCAGA CCACATGGATGGAATACGCCAGGTTCAACTTTATTCCGGCCATGCTGTACACGCTCATGTCTCTGGGCCTGGTGCTGCTC GTGCTGCGTACCAACGTCGACAAGGAAAGCCTCTGCCGGGCCGTGCGTGAAAAACATGCGGAACTTGGTGTAATGAGCGA TGAGCAGCGCCGCGCCCTGGTGTTGCTGTGCGGCACGCTGGTGCTGCTTTCCACCGACACCCTGCACCATCTGAGCGCCG GAACCGTGCTTGTGCTCGTGACGGCCATATCTTTTTTGCCGGGCGTAAGCCTCATGAACGGCAAGCGCATAAGTGCCATC AATTTCGCGCCGCTCTTCTTCATCATGGGTTGCATGGCCATCGGCAGCACCGGGGGCTTCCTCAAGGTCACCCAATGGCT GGCGGGCCTTGTTCTGCCCCTGTTCAGCGAAACAGGAACAACCCTCGCCACCATCTGCTCGTATGTGGTGGGCGTGGTCA TGAACTTTCTGCTTACGCCCCTGGCGGCTACCTCTACCCTTTCGGCCCCCATTACCGAGCTTGGCGTGCAGATGGGCATT GATCCCCGGCTGCTCTATTTCTCCTTCCAGTACGGCCTGGACAACCTGCTCTTCCCCTATGAATACGCGCTGTACCTCTA TTTTTACAGCAGCGGCTATATCCGGTTCAAGGACATGCTTGTGGTCATGGCCCTGCGCATGATCCTGGCAGGCATTTTTG TGGCCGTCATCGCCATGCCCTACTGGCGCATGCTCGGCTAG
Upstream 100 bases:
>100_bases CCTCGGTGGAAGACCCCTCCGGCAACTGACCCTCCCTCCACATCCCGCCCCGGTTTGCCGGCCGGGGCGGGGCAAAGTCC GGATACCCCACGAGGACGCC
Downstream 100 bases:
>100_bases ACGGCGGGCAACACATTCTGTCAACAGACATATGGGGATTCTTCCGATGAAAAAACTGACAGGTTTTCTGCTGGCCGCCA CTATACTGATGGGTGCGGCC
Product: sodium/sulfate symporter
Products: NA
Alternate protein names: Di- And Tricarboxylate Transporters-Like
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MLVKTSDLTPAMLAKWAFSLILPLAVYFVMPRSEAFTDPMAAFLAVTLWAVIAWAVDSMNEVAVGIALPILYTLFCGVSQ KVVYGPWLSEVPIIVIGGFTLGKIIQETGLGKRIALTCVKLTGGSFAGALAGMTLAAAIISPLVPSIMGKAAIICAVALS LCDALDFKPKSREATAVVLAACLAVGSTKLAYLTGAGDLVMGMGLVDKVMGTQTTWMEYARFNFIPAMLYTLMSLGLVLL VLRTNVDKESLCRAVREKHAELGVMSDEQRRALVLLCGTLVLLSTDTLHHLSAGTVLVLVTAISFLPGVSLMNGKRISAI NFAPLFFIMGCMAIGSTGGFLKVTQWLAGLVLPLFSETGTTLATICSYVVGVVMNFLLTPLAATSTLSAPITELGVQMGI DPRLLYFSFQYGLDNLLFPYEYALYLYFYSSGYIRFKDMLVVMALRMILAGIFVAVIAMPYWRMLG
Sequences:
>Translated_466_residues MLVKTSDLTPAMLAKWAFSLILPLAVYFVMPRSEAFTDPMAAFLAVTLWAVIAWAVDSMNEVAVGIALPILYTLFCGVSQ KVVYGPWLSEVPIIVIGGFTLGKIIQETGLGKRIALTCVKLTGGSFAGALAGMTLAAAIISPLVPSIMGKAAIICAVALS LCDALDFKPKSREATAVVLAACLAVGSTKLAYLTGAGDLVMGMGLVDKVMGTQTTWMEYARFNFIPAMLYTLMSLGLVLL VLRTNVDKESLCRAVREKHAELGVMSDEQRRALVLLCGTLVLLSTDTLHHLSAGTVLVLVTAISFLPGVSLMNGKRISAI NFAPLFFIMGCMAIGSTGGFLKVTQWLAGLVLPLFSETGTTLATICSYVVGVVMNFLLTPLAATSTLSAPITELGVQMGI DPRLLYFSFQYGLDNLLFPYEYALYLYFYSSGYIRFKDMLVVMALRMILAGIFVAVIAMPYWRMLG >Mature_466_residues MLVKTSDLTPAMLAKWAFSLILPLAVYFVMPRSEAFTDPMAAFLAVTLWAVIAWAVDSMNEVAVGIALPILYTLFCGVSQ KVVYGPWLSEVPIIVIGGFTLGKIIQETGLGKRIALTCVKLTGGSFAGALAGMTLAAAIISPLVPSIMGKAAIICAVALS LCDALDFKPKSREATAVVLAACLAVGSTKLAYLTGAGDLVMGMGLVDKVMGTQTTWMEYARFNFIPAMLYTLMSLGLVLL VLRTNVDKESLCRAVREKHAELGVMSDEQRRALVLLCGTLVLLSTDTLHHLSAGTVLVLVTAISFLPGVSLMNGKRISAI NFAPLFFIMGCMAIGSTGGFLKVTQWLAGLVLPLFSETGTTLATICSYVVGVVMNFLLTPLAATSTLSAPITELGVQMGI DPRLLYFSFQYGLDNLLFPYEYALYLYFYSSGYIRFKDMLVVMALRMILAGIFVAVIAMPYWRMLG
Specific function: Responsible For The Uptake Of Citrate In Exchange To The Efflux Of Succinate. Has A Relatively Broad Specificity For C(4)- Dicarboxylates And Tricarboxylates. [C]
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50076; Mature: 50076
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKTSDLTPAMLAKWAFSLILPLAVYFVMPRSEAFTDPMAAFLAVTLWAVIAWAVDSMN CCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH EVAVGIALPILYTLFCGVSQKVVYGPWLSEVPIIVIGGFTLGKIIQETGLGKRIALTCVK HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEEEE LTGGSFAGALAGMTLAAAIISPLVPSIMGKAAIICAVALSLCDALDFKPKSREATAVVLA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ACLAVGSTKLAYLTGAGDLVMGMGLVDKVMGTQTTWMEYARFNFIPAMLYTLMSLGLVLL HHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRTNVDKESLCRAVREKHAELGVMSDEQRRALVLLCGTLVLLSTDTLHHLSAGTVLVLV HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TAISFLPGVSLMNGKRISAINFAPLFFIMGCMAIGSTGGFLKVTQWLAGLVLPLFSETGT HHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC TLATICSYVVGVVMNFLLTPLAATSTLSAPITELGVQMGIDPRLLYFSFQYGLDNLLFPY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEHHCCCCCCCHH EYALYLYFYSSGYIRFKDMLVVMALRMILAGIFVAVIAMPYWRMLG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVKTSDLTPAMLAKWAFSLILPLAVYFVMPRSEAFTDPMAAFLAVTLWAVIAWAVDSMN CCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH EVAVGIALPILYTLFCGVSQKVVYGPWLSEVPIIVIGGFTLGKIIQETGLGKRIALTCVK HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEEEE LTGGSFAGALAGMTLAAAIISPLVPSIMGKAAIICAVALSLCDALDFKPKSREATAVVLA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ACLAVGSTKLAYLTGAGDLVMGMGLVDKVMGTQTTWMEYARFNFIPAMLYTLMSLGLVLL HHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRTNVDKESLCRAVREKHAELGVMSDEQRRALVLLCGTLVLLSTDTLHHLSAGTVLVLV HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TAISFLPGVSLMNGKRISAINFAPLFFIMGCMAIGSTGGFLKVTQWLAGLVLPLFSETGT HHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC TLATICSYVVGVVMNFLLTPLAATSTLSAPITELGVQMGIDPRLLYFSFQYGLDNLLFPY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEEHHCCCCCCCHH EYALYLYFYSSGYIRFKDMLVVMALRMILAGIFVAVIAMPYWRMLG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA