| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905177
Identifier: 220905177
GI number: 220905177
Start: 2307290
End: 2308486
Strand: Reverse
Name: 220905177
Synonym: Ddes_1915
Alternate gene names: NA
Gene position: 2308486-2307290 (Counterclockwise)
Preceding gene: 220905182
Following gene: 220905176
Centisome position: 80.34
GC content: 65.08
Gene sequence:
>1197_bases ATGGAAGTGTATCTGGATTGTAGCGGCGGCATCAGTGGCGACATGACCCTGGCCGCTCTGGCTCACCTGGGTGTGGATTT TGCGCCGCTGACGGCAGCGCTGGAAAAGGCGGGCATAGCCTGTGAGCTGGATATCCGTGAAGAGCTGAGGGCCGGGGGGC CGGGCAGGTGCGCTGATGTGCGCTGGCGGCAGGAAGAACAGCCTTTGCGTCATCCTGCGGATATTGCAGCCATCTTTAAT GTTGTGGAGGTTTCCGTCGGAGTGCGGGCCCGCGCACTGGCCGTACTTGATGCCCTGACTGAGGCAGAGGCCCATGCCCA TCAGATCCGGCCGGAAGATGTGCATTTTCATGAAGTAGGAGCCGTGGATACTCTGGTTGATATTCTGGGCGTATGCTACG GCCTTGAGTGTCTGGGCGCGCGCCGGGTTATCGCTTCGCCCCTGCCCTGGTTTTCCGGCACCACGGTTTGCGAGCACGGG CGCATCCCCCTGCCTGCTCCGGCCACGGCCTGGCTTTTGCGCGGCAAGCCTGTTTTTTCATCCGAAGGGGAAGAACCCTC CCGTCAGGAGCTTGTCACGCCGACAGGCGCGGCCTTGCTGCATGCACTGGCAGACGAGTTTGCCAATGGTCCCCGTGGCG TGCCGTCGGCCCTGGGTACGGGCTATGGCTCACGACCGGCGGCGCGCGGCCTGCGCGCATGGCTTGTGCGCCCGGAAGCG GACTTGACCGGGGCAGACCACAGTATGGGCGGGCAGGAGGTGGTCAGCCAGCTTGAAACTCACCTGGACCATCTGACCGG TGAGGAACTGGGGCTGGCCCTCAGTGCGCTGGCCGAAATGCCTGAAGTGCTTGATGTGCTGTGGCTGCCGGGCGTGGGCA AGAAAAACCGGCCCTCCGGACTGCTGCGCGTGCTCTGCCTGCCCGTGCATGAGGATATGGCGAGCCGTGCTGTTTTGCGC CACACCCATACCCTTGGTCTGCGCCGCCAGCGTGTGGAGCGCCTTGTTTTGCCCCGGCGGGGCGTAAGCACGCGCCTTGC CGGACAGGATATGCCCGCCAAGCTCTACGAGATCGAGGGGCGCAGCTATGTGCGCCCCGAGGCCGGGGCCGTGGCGCGGG CCGCGCGTGCAGAAGGCCTGGGAGCACCCGCCCTGCGCCTGAAGCCCGAAGCCGGAGAAGGCGGCCCTGTTGAATAG
Upstream 100 bases:
>100_bases AAGGCAGCGGCCTTTTTCTCTTTATACAACAACAGGCGGATGCTGCACAAGTGCGGCCGGCAGGGCGTCCGGCGCGGGGC GCGATGGAGATGGAGGCGTG
Downstream 100 bases:
>100_bases AAAATTCAAAAAAAAGAGCAATAGTTACAATAAGAAACCCCGCAATACGCAAAGAGCTCTTGCGTCCGGAACTGCATAGG CATATGGAAGCTCAGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MEVYLDCSGGISGDMTLAALAHLGVDFAPLTAALEKAGIACELDIREELRAGGPGRCADVRWRQEEQPLRHPADIAAIFN VVEVSVGVRARALAVLDALTEAEAHAHQIRPEDVHFHEVGAVDTLVDILGVCYGLECLGARRVIASPLPWFSGTTVCEHG RIPLPAPATAWLLRGKPVFSSEGEEPSRQELVTPTGAALLHALADEFANGPRGVPSALGTGYGSRPAARGLRAWLVRPEA DLTGADHSMGGQEVVSQLETHLDHLTGEELGLALSALAEMPEVLDVLWLPGVGKKNRPSGLLRVLCLPVHEDMASRAVLR HTHTLGLRRQRVERLVLPRRGVSTRLAGQDMPAKLYEIEGRSYVRPEAGAVARAARAEGLGAPALRLKPEAGEGGPVE
Sequences:
>Translated_398_residues MEVYLDCSGGISGDMTLAALAHLGVDFAPLTAALEKAGIACELDIREELRAGGPGRCADVRWRQEEQPLRHPADIAAIFN VVEVSVGVRARALAVLDALTEAEAHAHQIRPEDVHFHEVGAVDTLVDILGVCYGLECLGARRVIASPLPWFSGTTVCEHG RIPLPAPATAWLLRGKPVFSSEGEEPSRQELVTPTGAALLHALADEFANGPRGVPSALGTGYGSRPAARGLRAWLVRPEA DLTGADHSMGGQEVVSQLETHLDHLTGEELGLALSALAEMPEVLDVLWLPGVGKKNRPSGLLRVLCLPVHEDMASRAVLR HTHTLGLRRQRVERLVLPRRGVSTRLAGQDMPAKLYEIEGRSYVRPEAGAVARAARAEGLGAPALRLKPEAGEGGPVE >Mature_398_residues MEVYLDCSGGISGDMTLAALAHLGVDFAPLTAALEKAGIACELDIREELRAGGPGRCADVRWRQEEQPLRHPADIAAIFN VVEVSVGVRARALAVLDALTEAEAHAHQIRPEDVHFHEVGAVDTLVDILGVCYGLECLGARRVIASPLPWFSGTTVCEHG RIPLPAPATAWLLRGKPVFSSEGEEPSRQELVTPTGAALLHALADEFANGPRGVPSALGTGYGSRPAARGLRAWLVRPEA DLTGADHSMGGQEVVSQLETHLDHLTGEELGLALSALAEMPEVLDVLWLPGVGKKNRPSGLLRVLCLPVHEDMASRAVLR HTHTLGLRRQRVERLVLPRRGVSTRLAGQDMPAKLYEIEGRSYVRPEAGAVARAARAEGLGAPALRLKPEAGEGGPVE
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002822 [H]
Pfam domain/function: PF01969 DUF111 [H]
EC number: NA
Molecular weight: Translated: 42426; Mature: 42426
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYLDCSGGISGDMTLAALAHLGVDFAPLTAALEKAGIACELDIREELRAGGPGRCADV CEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCC RWRQEEQPLRHPADIAAIFNVVEVSVGVRARALAVLDALTEAEAHAHQIRPEDVHFHEVG CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AVDTLVDILGVCYGLECLGARRVIASPLPWFSGTTVCEHGRIPLPAPATAWLLRGKPVFS HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHEECCCCCCC SEGEEPSRQELVTPTGAALLHALADEFANGPRGVPSALGTGYGSRPAARGLRAWLVRPEA CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHEEECCCC DLTGADHSMGGQEVVSQLETHLDHLTGEELGLALSALAEMPEVLDVLWLPGVGKKNRPSG CCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH LLRVLCLPVHEDMASRAVLRHTHTLGLRRQRVERLVLPRRGVSTRLAGQDMPAKLYEIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEECC RSYVRPEAGAVARAARAEGLGAPALRLKPEAGEGGPVE CCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MEVYLDCSGGISGDMTLAALAHLGVDFAPLTAALEKAGIACELDIREELRAGGPGRCADV CEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCC RWRQEEQPLRHPADIAAIFNVVEVSVGVRARALAVLDALTEAEAHAHQIRPEDVHFHEVG CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AVDTLVDILGVCYGLECLGARRVIASPLPWFSGTTVCEHGRIPLPAPATAWLLRGKPVFS HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHEECCCCCCC SEGEEPSRQELVTPTGAALLHALADEFANGPRGVPSALGTGYGSRPAARGLRAWLVRPEA CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHEEECCCC DLTGADHSMGGQEVVSQLETHLDHLTGEELGLALSALAEMPEVLDVLWLPGVGKKNRPSG CCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH LLRVLCLPVHEDMASRAVLRHTHTLGLRRQRVERLVLPRRGVSTRLAGQDMPAKLYEIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEECC RSYVRPEAGAVARAARAEGLGAPALRLKPEAGEGGPVE CCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA