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The map label for this gene is ybeQ [H]

Identifier: 220905150

GI number: 220905150

Start: 2276364

End: 2277404

Strand: Reverse

Name: ybeQ [H]

Synonym: Ddes_1888

Alternate gene names: 220905150

Gene position: 2277404-2276364 (Counterclockwise)

Preceding gene: 220905151

Following gene: 220905138

Centisome position: 79.26

GC content: 61.67

Gene sequence:

>1041_bases
ATGAAAATCCGGTTAGTTATCATAGTTTTTCTGGCATTTTTGTGCCTTTCGCCTTTGTGGCTGTCACAGGGCGACGCCCG
CGCTGATGATGGGGAAAGCCTGCGCCAGGTGCAGACGGCACTGGGCAAAAACGATTACGATGAGGCCGTGCGCCTGCTCA
AGCCGCTTGTTGACGGCGGCAATGCTGAAGCCCTGTACGTTATGGGCCGTCTTATTCTGGACGGCAAGGGCGTGAAGAAA
AACCGCACCCGTGCGGCGGAGTTTTTTCGCCTGGCTGCGGAAAAGGGCGACGTGAGCGCCATGAACTCCTGGGCCACAGC
CTTGGCCTCGGGCGACGGTGTGCCGCGCAACTACCGTGAGGCCGCGCGCTGGTTCCGCAAGGCGGCCGAACAGGGGCTGG
CCATGGCCCAGTACAACCTTGGTTACCTCTACGCCCACGGGCGCGGCGTCAGCAAGGATGAGGCCGCCGCCATTGACTGG
TACAGCCGTGCCGCCAATCAGGGCCTTGCATCGGCCCAGTATTCCCTGGGCTGGACCTATCTGAACAGCAAGGGTGAAAA
CCAGAGCGACACCAAAGCCGCCCACTGGTTTGAAAAAGCCGCGGAGCAAGATCACCCCAAGGCGCAGAACAATCTGGCAT
TCATGTACGCCGAGGGACGGGGCTATGCCCAGGACCCGGCCAAGGCCGTGCAGTGGTACACACGCGCTGCCGAACAGGGC
TATGCCGAAGCCCAGTATAACCTTGGCTTTATGTACGAACAGGGCCGCGGCGTGCCGCAGGACTATAACCAGGCCGTGGA
CTGGTACCGTAAGGCTGCGGAGCAGAACGAGGCCGCCGCGCAGTACAGCCTGGGACTCATGTATGATCAGGGAACCGGCG
TGCCGCGCAATCTGAGCGAGGCCAACCGCTGGTACAATCTGGCCGCCAAGAATGGCGACCCCGATGCCCGATCCGTGGTG
CGCGCCCAGAACAACAAGCCGCAGCAGGCGCGCAAGGCCGCTCCGGCAAACCGGCAACAGAAGCGCGATAAAAAGCAGTA
G

Upstream 100 bases:

>100_bases
TGTGCAGGACGCCCGCCGCGCCTTTTGCGCCCTGCAGGCTCTTACGCTCAAGGGTGATGAAAACCATTATTGGATCTCAA
CGTTGAAGAGTTTATAACAC

Downstream 100 bases:

>100_bases
CATTTGCCATACAGCCAGAAAGCCGAGGCCCGTTCGCATCTGCATGCGAACGGGCCTCGTGTATTTGGGGGGCGGGCTGG
TCCGCCTTTCTGGTTTTTTC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKIRLVIIVFLAFLCLSPLWLSQGDARADDGESLRQVQTALGKNDYDEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKK
NRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDW
YSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQG
YAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYSLGLMYDQGTGVPRNLSEANRWYNLAAKNGDPDARSVV
RAQNNKPQQARKAAPANRQQKRDKKQ

Sequences:

>Translated_346_residues
MKIRLVIIVFLAFLCLSPLWLSQGDARADDGESLRQVQTALGKNDYDEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKK
NRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDW
YSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQG
YAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYSLGLMYDQGTGVPRNLSEANRWYNLAAKNGDPDARSVV
RAQNNKPQQARKAAPANRQQKRDKKQ
>Mature_346_residues
MKIRLVIIVFLAFLCLSPLWLSQGDARADDGESLRQVQTALGKNDYDEAVRLLKPLVDGGNAEALYVMGRLILDGKGVKK
NRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYREAARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDW
YSRAANQGLASAQYSLGWTYLNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQG
YAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYSLGLMYDQGTGVPRNLSEANRWYNLAAKNGDPDARSVV
RAQNNKPQQARKAAPANRQQKRDKKQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=333, Percent_Identity=29.7297297297297, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI19923669, Length=292, Percent_Identity=32.8767123287671, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI217330658, Length=181, Percent_Identity=31.4917127071823, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI217330656, Length=181, Percent_Identity=31.4917127071823, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI154689719, Length=302, Percent_Identity=30.1324503311258, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI33620759, Length=178, Percent_Identity=30.3370786516854, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081769, Length=315, Percent_Identity=36.5079365079365, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI1786867, Length=152, Percent_Identity=36.1842105263158, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17563256, Length=290, Percent_Identity=27.5862068965517, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6319410, Length=332, Percent_Identity=28.3132530120482, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21355295, Length=278, Percent_Identity=30.9352517985612, Blast_Score=118, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 38543; Mature: 38543

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRLVIIVFLAFLCLSPLWLSQGDARADDGESLRQVQTALGKNDYDEAVRLLKPLVDGG
CCCHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYRE
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
AARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDWYSRAANQGLASAQYSLGWTY
HHHHHHHHHHCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEE
LNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQG
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC
YAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYSLGLMYDQGTGVPRNLSE
CHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
ANRWYNLAAKNGDPDARSVVRAQNNKPQQARKAAPANRQQKRDKKQ
HHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MKIRLVIIVFLAFLCLSPLWLSQGDARADDGESLRQVQTALGKNDYDEAVRLLKPLVDGG
CCCHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NAEALYVMGRLILDGKGVKKNRTRAAEFFRLAAEKGDVSAMNSWATALASGDGVPRNYRE
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
AARWFRKAAEQGLAMAQYNLGYLYAHGRGVSKDEAAAIDWYSRAANQGLASAQYSLGWTY
HHHHHHHHHHCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEE
LNSKGENQSDTKAAHWFEKAAEQDHPKAQNNLAFMYAEGRGYAQDPAKAVQWYTRAAEQG
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC
YAEAQYNLGFMYEQGRGVPQDYNQAVDWYRKAAEQNEAAAQYSLGLMYDQGTGVPRNLSE
CHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
ANRWYNLAAKNGDPDARSVVRAQNNKPQQARKAAPANRQQKRDKKQ
HHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]