| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905119
Identifier: 220905119
GI number: 220905119
Start: 2238047
End: 2239678
Strand: Direct
Name: 220905119
Synonym: Ddes_1856
Alternate gene names: NA
Gene position: 2238047-2239678 (Clockwise)
Preceding gene: 220905117
Following gene: 220905120
Centisome position: 77.89
GC content: 55.27
Gene sequence:
>1632_bases ATGAAAAAGCTGTCCTCATTGATTCTGGCTGCCGCACTTACGCTTGGAGGGGTAAGCACCGCCAGCGCCATTGACTTCAA AATCAGGGGCTACTGGAGTTTTTCCTACGAAGTTGCCACCAACAGCGCCTTTGTAAACAGCCGTGCCGGCGGCAGCACCG GAGACGACTTTTCTGCCGGTGAACGACTGCGCCTTTACCTTGAGGCCAAAGCCTCCAAATCCCTTTCCGGCACGGTGGGC ATTGAAATCGGTGATATCTACTACGGGCAGGCGGAAAAAAACAACCGTGCCATGGGCGGCGCCCTGGGGGCCGACGGCAC CCTCATCAAGCTCAAGCGCGCTTTTCTTGACTGGCAGGTTCCCAGCAGCGATATCAAAGTGCGCATGGGCATTCAGGGCA TGAAGCTGCCCCTGTTTGCCTCCAGCGGCAACTTTGTGCTGGATGACGATGCCGCGGGCATTGTGGCCTCTTCGCGCGTT AACGAAAACTTTTCGGTCACGGCCATGTGGGCACGCCTGCTGAACGACAGCCCCCTTGAAACAACGCCGTCATACTATAA TGGCACCGCCTATGACCCGGACCATCCCGACAACGATGCGCTCGACTTTTTCGCCCTGCTTTTTCCCGTGCGTTTTGACG GTTTCAACGTGACCCCCTGGGTGGGCTTTGCCGCCATGGGCGACGGCATCGGCCGCAACCCCAACAAGGATTACAGTGAA AATTTTATCAAAACCTCACGTAAAAAACTTCAGGAAGGCATGGGCGTTTACACAGGCACGGGCAAGGCCCCCATGCTGCT CGAATACGGCGGCGGCGAAACCTACACCTGGTGGGGCGGGCTTTCCGCAAACTTCAACCGTTTCGACCCCTTCATACTGA AATTTGACTTTATGTACGGCAACAAGCAAGGTAACGGCATGTACCGCGACGAGACCTATACCAAGGATAACGGCAAGGTC AAAAAACTGGGCAAGCACGGGCCTCTTGATGCCGACCGCTATAACCGCAGCGGCTGGTTTGCAAGCATACTTGCCGAATA CAGGTTTGACTGGGGTACGCCCGGCATCTTTGCCTGGTACAGTTCCGGCGATGACGACGACCTCAATAACGGTTCGGAAC GCATGCCTGCCATGTCAGGCAACTGGGAGTACACACACACCGGCTTTAAGGGAACCACGGCTTCAGGCGCGTATGACGGC ATTTTCGCCTACCAGCCCCTTGGCCTCTGGGGCCTTGCGCTGCAACTGCGCGAAATCCCCCTGATGGAAGACCTTACAAG CCATATCAAGGTACTCTACATGCGGGGAACCAACTCCGCAAATATGCCCAAAAAGATCGCGGAATCACAATATCTGTTAA AAGAAAACATCAACGGCATCTCGCCGGCCGGGGCCATCGGTTCCTACCTGACCACCAATGACTGGGCCATGGAAGTGGAC TGGAATACCGAATACAAGATTTACGAAAATCTCAAGCTCGTTGTTGAAGCATCGTATCTTTATGTGGATTTCGACAAGGA TACCTGGAGCTACACGGCCCCCGACGGGGTAAAATACGGGCGCGAATGGGCGCAGCGCCCCGACAACCCCAACGTGTTCA AGGTGGGCCTCAACTTCCACTATTCGTTCTAG
Upstream 100 bases:
>100_bases TGATTTGTAAAGCGACTGAACAGGGTCAACCTACTGCCGGGCAGAGGGTAAAACCTGACACTGGATAAACCACATCCGCG TCATTGCATGGAGAATGCCG
Downstream 100 bases:
>100_bases TGTCCTCCCCGGCCTTTCCGCATTTCCTGCGGCAAGGCATTGCAGCCCCTCTTACGCAAAGATAAGGGGGGCTTTGCATC TCGCTGGCGAAGGCCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKKLSSLILAAALTLGGVSTASAIDFKIRGYWSFSYEVATNSAFVNSRAGGSTGDDFSAGERLRLYLEAKASKSLSGTVG IEIGDIYYGQAEKNNRAMGGALGADGTLIKLKRAFLDWQVPSSDIKVRMGIQGMKLPLFASSGNFVLDDDAAGIVASSRV NENFSVTAMWARLLNDSPLETTPSYYNGTAYDPDHPDNDALDFFALLFPVRFDGFNVTPWVGFAAMGDGIGRNPNKDYSE NFIKTSRKKLQEGMGVYTGTGKAPMLLEYGGGETYTWWGGLSANFNRFDPFILKFDFMYGNKQGNGMYRDETYTKDNGKV KKLGKHGPLDADRYNRSGWFASILAEYRFDWGTPGIFAWYSSGDDDDLNNGSERMPAMSGNWEYTHTGFKGTTASGAYDG IFAYQPLGLWGLALQLREIPLMEDLTSHIKVLYMRGTNSANMPKKIAESQYLLKENINGISPAGAIGSYLTTNDWAMEVD WNTEYKIYENLKLVVEASYLYVDFDKDTWSYTAPDGVKYGREWAQRPDNPNVFKVGLNFHYSF
Sequences:
>Translated_543_residues MKKLSSLILAAALTLGGVSTASAIDFKIRGYWSFSYEVATNSAFVNSRAGGSTGDDFSAGERLRLYLEAKASKSLSGTVG IEIGDIYYGQAEKNNRAMGGALGADGTLIKLKRAFLDWQVPSSDIKVRMGIQGMKLPLFASSGNFVLDDDAAGIVASSRV NENFSVTAMWARLLNDSPLETTPSYYNGTAYDPDHPDNDALDFFALLFPVRFDGFNVTPWVGFAAMGDGIGRNPNKDYSE NFIKTSRKKLQEGMGVYTGTGKAPMLLEYGGGETYTWWGGLSANFNRFDPFILKFDFMYGNKQGNGMYRDETYTKDNGKV KKLGKHGPLDADRYNRSGWFASILAEYRFDWGTPGIFAWYSSGDDDDLNNGSERMPAMSGNWEYTHTGFKGTTASGAYDG IFAYQPLGLWGLALQLREIPLMEDLTSHIKVLYMRGTNSANMPKKIAESQYLLKENINGISPAGAIGSYLTTNDWAMEVD WNTEYKIYENLKLVVEASYLYVDFDKDTWSYTAPDGVKYGREWAQRPDNPNVFKVGLNFHYSF >Mature_543_residues MKKLSSLILAAALTLGGVSTASAIDFKIRGYWSFSYEVATNSAFVNSRAGGSTGDDFSAGERLRLYLEAKASKSLSGTVG IEIGDIYYGQAEKNNRAMGGALGADGTLIKLKRAFLDWQVPSSDIKVRMGIQGMKLPLFASSGNFVLDDDAAGIVASSRV NENFSVTAMWARLLNDSPLETTPSYYNGTAYDPDHPDNDALDFFALLFPVRFDGFNVTPWVGFAAMGDGIGRNPNKDYSE NFIKTSRKKLQEGMGVYTGTGKAPMLLEYGGGETYTWWGGLSANFNRFDPFILKFDFMYGNKQGNGMYRDETYTKDNGKV KKLGKHGPLDADRYNRSGWFASILAEYRFDWGTPGIFAWYSSGDDDDLNNGSERMPAMSGNWEYTHTGFKGTTASGAYDG IFAYQPLGLWGLALQLREIPLMEDLTSHIKVLYMRGTNSANMPKKIAESQYLLKENINGISPAGAIGSYLTTNDWAMEVD WNTEYKIYENLKLVVEASYLYVDFDKDTWSYTAPDGVKYGREWAQRPDNPNVFKVGLNFHYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60246; Mature: 60246
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSSLILAAALTLGGVSTASAIDFKIRGYWSFSYEVATNSAFVNSRAGGSTGDDFSAG CCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCC ERLRLYLEAKASKSLSGTVGIEIGDIYYGQAEKNNRAMGGALGADGTLIKLKRAFLDWQV CEEEEEEEECCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCC PSSDIKVRMGIQGMKLPLFASSGNFVLDDDAAGIVASSRVNENFSVTAMWARLLNDSPLE CCCCCEEEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCCC TTPSYYNGTAYDPDHPDNDALDFFALLFPVRFDGFNVTPWVGFAAMGDGIGRNPNKDYSE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCHHH NFIKTSRKKLQEGMGVYTGTGKAPMLLEYGGGETYTWWGGLSANFNRFDPFILKFDFMYG HHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEEC NKQGNGMYRDETYTKDNGKVKKLGKHGPLDADRYNRSGWFASILAEYRFDWGTPGIFAWY CCCCCCCCCCCCEECCCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEE SSGDDDDLNNGSERMPAMSGNWEYTHTGFKGTTASGAYDGIFAYQPLGLWGLALQLREIP CCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCC LMEDLTSHIKVLYMRGTNSANMPKKIAESQYLLKENINGISPAGAIGSYLTTNDWAMEVD CHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEECCCEEEEEE WNTEYKIYENLKLVVEASYLYVDFDKDTWSYTAPDGVKYGREWAQRPDNPNVFKVGLNFH CCCCEEEECCEEEEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCCEEEEEEEEE YSF ECC >Mature Secondary Structure MKKLSSLILAAALTLGGVSTASAIDFKIRGYWSFSYEVATNSAFVNSRAGGSTGDDFSAG CCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCC ERLRLYLEAKASKSLSGTVGIEIGDIYYGQAEKNNRAMGGALGADGTLIKLKRAFLDWQV CEEEEEEEECCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCC PSSDIKVRMGIQGMKLPLFASSGNFVLDDDAAGIVASSRVNENFSVTAMWARLLNDSPLE CCCCCEEEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCCC TTPSYYNGTAYDPDHPDNDALDFFALLFPVRFDGFNVTPWVGFAAMGDGIGRNPNKDYSE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCHHH NFIKTSRKKLQEGMGVYTGTGKAPMLLEYGGGETYTWWGGLSANFNRFDPFILKFDFMYG HHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEEC NKQGNGMYRDETYTKDNGKVKKLGKHGPLDADRYNRSGWFASILAEYRFDWGTPGIFAWY CCCCCCCCCCCCEECCCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEE SSGDDDDLNNGSERMPAMSGNWEYTHTGFKGTTASGAYDGIFAYQPLGLWGLALQLREIP CCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCC LMEDLTSHIKVLYMRGTNSANMPKKIAESQYLLKENINGISPAGAIGSYLTTNDWAMEVD CHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEECCCEEEEEE WNTEYKIYENLKLVVEASYLYVDFDKDTWSYTAPDGVKYGREWAQRPDNPNVFKVGLNFH CCCCEEEECCEEEEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCCEEEEEEEEE YSF ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA