Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905109

Identifier: 220905109

GI number: 220905109

Start: 2227590

End: 2228831

Strand: Direct

Name: 220905109

Synonym: Ddes_1846

Alternate gene names: NA

Gene position: 2227590-2228831 (Clockwise)

Preceding gene: 220905106

Following gene: 220905110

Centisome position: 77.52

GC content: 51.45

Gene sequence:

>1242_bases
ATGAAAAAATTGCTTATTCTTGGTGCTGGCGCTGGTGGAACCATGATAGCCACGAAGATGAGAAAACTGTTAAGCGAAAG
AGAGTGGCAAATCACTCTTATAGATAGAGACCCTGTCCATCATTATCAGCCGGGCTGGCTGCTGGTTCCGTTTGGTGTAG
ACACGCCGCAGGGCTGCGTTCGCCCCAAAAAAGATTTCATCAGCCGCGGCGTCAATTTTGTCATCGACACCATCAATTCC
CTTGATCCCATCGCCCGTAAGGTTGAATGCAAAAACAGCACGCACACCTACGACTGGATCATCATTGCAACAGGCGCAAG
AATTGCCCCCGATGAAGTGCCCGGCCTTCTGGATGACTGGGGCGGCAAAATCCACAATTTCTACACCCATGACGGTGCAG
AAGCCCTTTACGGCAAGATGAAGCATTTCAAAAAGGGAAGACTGGTTCTTCATATTTGCGAAACGCCCATCAAGTGTCCT
GTCGCGCCGCTGGAATTTGTGTACATGGCTGACTGGTATCTGCAGAAAATGGGCGTGCGTGACAACGTGGAAATTGAGCT
TGTCACTCCCCTTACGGGCGCATTTACCAAACCTGTGGCAAACAACATCCTTGGCGCGCTTTGCGAGCAAAAGGGCATCA
AGGTCACCACCAACTGGACTGTGGACAGCGTTGAAGCCGACCGCTCTGTTATCACCTCGGTCACCGGCGACGAAATCAAC
TATGACCTGCTGGTGACCATTCCCCCCAACCTGGGCCAGGAATTTCTTATTGAGTCCGAAGTGTCCGACGTGACCGGCTA
CGTTGATACGGACAAGGAACTGTTGCGGGCAAAGAAATTTGAAAACATGTACATCATTGGCGATGCCACCAACGTTCCGG
CCTCCAAGGCAGGCTCTGTGGCCCACTTTGAAGTGGATGTCATCGCCCAGAACATGATGTCCGACATTGAAGGCACAGAC
AACTACTACAAGTTTGACGGGCACACCAACTGCTTTATTGTTACGGGCTTTGAAAAGGCGTCGCTCATTGACTTCAGTTA
TGCCATCGAGCCGCTGCCGGGCATGTTCCCGCTCCCCGGGGTTGGCCCGTTTGAACTGCTGGGCGAAAGCCACATAAACT
ACTGGGGCAAACTCATGTTCAAGTGGGTATATTACAACCTTATGCTGAAGGGCCACGAGCTGCCGTTTGAACCCAACATG
TATCTTGCAGGCAAAGACACCTCCTTGCTGAGAAACAAGTAG

Upstream 100 bases:

>100_bases
ACCCCACAGCTAGGATATCCGCCGTGCCAATATCGGTCATCCATAGTGGGTGAGGCTTGTTCAAGACAAACCGCTCTATA
TCTCAATTGGAGTCAACTAG

Downstream 100 bases:

>100_bases
GCTGGGGGACGCTATGACACCTGAAGAAAAAATTCTCGAACGGCTGAATGCCATTGAAGACAGGCTTACTGACCTTCAAG
CTGCCAAAGAAAACAGCAGC

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; SulfideQuinone Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Twin-Arginine Translocation Pathway Signal; Flavoprotein Reductase; Sulfide Dehydrogenase; Sulfide-Quinone Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone Oxidoreductase-Like Protein; Flavoprotein Reductase Conjectural; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Anti-Anti-Sigma Regulatory Factor; Sulfide Quinone-Rductase; Filamentous Hemagglutinin; Sulphide Quinone Reductase; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; Dehydrogenase; SulfideQuinone Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Sulfide Dehydrogenase Related Protein; Dehydrogenase/Reductase

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS
LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP
VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN
YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD
NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM
YLAGKDTSLLRNK

Sequences:

>Translated_413_residues
MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS
LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP
VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN
YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD
NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM
YLAGKDTSLLRNK
>Mature_413_residues
MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCVRPKKDFISRGVNFVIDTINS
LDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDWGGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCP
VAPLEFVYMADWYLQKMGVRDNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN
YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSVAHFEVDVIAQNMMSDIEGTD
NYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPGVGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNM
YLAGKDTSLLRNK

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=394, Percent_Identity=27.6649746192893, Blast_Score=162, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI115534373, Length=347, Percent_Identity=25.3602305475504, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17539680, Length=428, Percent_Identity=24.7663551401869, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24657386, Length=376, Percent_Identity=26.8617021276596, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24657391, Length=376, Percent_Identity=26.8617021276596, Blast_Score=128, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46262; Mature: 46262

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCV
CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHCC
RPKKDFISRGVNFVIDTINSLDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDW
CCCHHHHHCCCCEEEHHHHHHCHHHHHHCCCCCCCEEEEEEEECCCEECHHHCCCCHHHC
GGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCPVAPLEFVYMADWYLQKMGVR
CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
DNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHEEECCCCCCC
YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSV
EEEEEEECCCCCHHHEEECCHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCE
AHFEVDVIAQNMMSDIEGTDNYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPG
EEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCC
VGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNMYLAGKDTSLLRNK
CCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCHHHHCCC
>Mature Secondary Structure
MKKLLILGAGAGGTMIATKMRKLLSEREWQITLIDRDPVHHYQPGWLLVPFGVDTPQGCV
CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHCC
RPKKDFISRGVNFVIDTINSLDPIARKVECKNSTHTYDWIIIATGARIAPDEVPGLLDDW
CCCHHHHHCCCCEEEHHHHHHCHHHHHHCCCCCCCEEEEEEEECCCEECHHHCCCCHHHC
GGKIHNFYTHDGAEALYGKMKHFKKGRLVLHICETPIKCPVAPLEFVYMADWYLQKMGVR
CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
DNVEIELVTPLTGAFTKPVANNILGALCEQKGIKVTTNWTVDSVEADRSVITSVTGDEIN
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHEEECCCCCCC
YDLLVTIPPNLGQEFLIESEVSDVTGYVDTDKELLRAKKFENMYIIGDATNVPASKAGSV
EEEEEEECCCCCHHHEEECCHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCE
AHFEVDVIAQNMMSDIEGTDNYYKFDGHTNCFIVTGFEKASLIDFSYAIEPLPGMFPLPG
EEEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCC
VGPFELLGESHINYWGKLMFKWVYYNLMLKGHELPFEPNMYLAGKDTSLLRNK
CCHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA