| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905091
Identifier: 220905091
GI number: 220905091
Start: 2204511
End: 2204852
Strand: Direct
Name: 220905091
Synonym: Ddes_1828
Alternate gene names: NA
Gene position: 2204511-2204852 (Clockwise)
Preceding gene: 220905090
Following gene: 220905092
Centisome position: 76.72
GC content: 59.94
Gene sequence:
>342_bases ATGCAACGCCTGCTCAAGAATCTGGATTACGCCACCGCGCTGCCCCTGGCCGCGCAGGTGGATTGCCAGCCGGGCCAGGT AGCCAGCAAGACGCTTGTTCAGAATGATGCCGTGGGTATAACCCTTTTCGCCTTTGACAAGGGCGAAAAAATCAGCGCCC ACACCTCCACGGGCGACGCCTTTGTGCTGGCCCTTGAAGGACAGGGGCAAGTGACCATCAACGGACAGACCAGCCCCCTC AAGGCCGGAGAGTCCATCATCATGCCCGCAGGGCAGCCCCATTCCGTCAGCGCTGTGGAGCGCTTCAAGATGCTGCTGGT TGTCATTTTTCCGCCGGAGTAA
Upstream 100 bases:
>100_bases GCCTGAAAGAATTTTACGATTATTCTGTTCCGTAACAATTGTTACGGACGTCCACACTCCCCCTTGGTATACAGGAATCA TCAAAAGCAAGGAGGGAACC
Downstream 100 bases:
>100_bases CGCCAGCCCGCCCACCGGCGGCACAAAAGCGGCCCGGACAGTTTTCATACCGTAAACATTTTTTCATCCCCGATGCCCGC CCGCTGCGGGTTTCACCCAA
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; 5-Nucleotidase SurE; Cytoplasmic Protein; Cupin Domain Containing Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDAFVLALEGQGQVTINGQTSPL KAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE
Sequences:
>Translated_113_residues MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDAFVLALEGQGQVTINGQTSPL KAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE >Mature_113_residues MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDAFVLALEGQGQVTINGQTSPL KAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11949; Mature: 11949
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDA CCHHHHHCCCCCCCCEEEEECCCCCCCCHHHEECCCCCEEEEEEECCCCEEEEECCCCCE FVLALEGQGQVTINGQTSPLKAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE EEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCHHHHHEEEEEEEEEECCC >Mature Secondary Structure MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDA CCHHHHHCCCCCCCCEEEEECCCCCCCCHHHEECCCCCEEEEEEECCCCEEEEECCCCCE FVLALEGQGQVTINGQTSPLKAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE EEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCHHHHHEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA