| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905088
Identifier: 220905088
GI number: 220905088
Start: 2201586
End: 2201969
Strand: Direct
Name: 220905088
Synonym: Ddes_1825
Alternate gene names: NA
Gene position: 2201586-2201969 (Clockwise)
Preceding gene: 220905077
Following gene: 220905089
Centisome position: 76.62
GC content: 61.98
Gene sequence:
>384_bases ATGAACACAGCTTTCTGTCCCGCGCGCGCATCGCGCATCAGCCGTCTGGCGGCCTTGGCAGCCGCCCTCCTTCTTGTCCT GCCTCTGGCCGCATGCGGCCTTGGCGAAGCCCCGCAAAGGGAAGAAACACCCCCGGGGCCCGTGGAAAGCTTCATGATCA TTTCCACCCCCGGCCAGACCACCGTGCTGGACGATGTGCAGTTCGGGCAGGGTGTTAATGTAAGCGTTGATGAAGTCTTT ACTTCGGCCAAAGGCGAAAACTGCAAGCGCGGCACGGTGCTGGCCGGGCAGAAAGAGGCCGAAGTGGTCGTCATCTGCCA GGATGACCAGGGCCGCTGGACCATGGCCCCCAGAGTATGGGGCCAGGGCATTTCCAAACCGTAA
Upstream 100 bases:
>100_bases AGAGCAGACATTCTCTGCGAGATGGAGGGGAGAAGAACTACTGTACCGCAACCACGTCAGACAATGATGGCGCTACGGTT TACCCCCGCCAGGAGCCAGC
Downstream 100 bases:
>100_bases TTGCACGGGGCCAACTTCCGAAACCATAGCAGGCGCGCGGCGCGGCACAGCCGCGAGACCGCGCGTCGCATACTTTGAAA CACCATGCTGCAACAAAAAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQTTVLDDVQFGQGVNVSVDEVF TSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVWGQGISKP
Sequences:
>Translated_127_residues MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQTTVLDDVQFGQGVNVSVDEVF TSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVWGQGISKP >Mature_127_residues MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQTTVLDDVQFGQGVNVSVDEVF TSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVWGQGISKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13397; Mature: 13397
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCC TVLDDVQFGQGVNVSVDEVFTSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVW EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEECCHHH GQGISKP CCCCCCC >Mature Secondary Structure MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCC TVLDDVQFGQGVNVSVDEVFTSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVW EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEECCHHH GQGISKP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA