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The map label for this gene is yhhG [C]

Identifier: 220905028

GI number: 220905028

Start: 2134430

End: 2134846

Strand: Direct

Name: yhhG [C]

Synonym: Ddes_1765

Alternate gene names: 220905028

Gene position: 2134430-2134846 (Clockwise)

Preceding gene: 220905027

Following gene: 220905029

Centisome position: 74.28

GC content: 57.55

Gene sequence:

>417_bases
ATGGGAAATCTTGCACGCTTTGGCGTTTCACTGGATCAAGACCTGCTGGAACCCTTTGACGAACTTTGCCGGCGCAAAAG
CTATCCCAATCGCTCCGAAGCCATACGCGACCTTATCCGCAAGGCCCTGGTGGAGGAAAAGTGGAACAGCGACGCCCACG
GCGCAGGTACACTCACCCTGGTTTACGACCATCACAAAAACGATCTTTCCCGCCGGCTCGTGCAAATTCAGCACGACGAC
CATGACCTTATCGTCACCACCCTGCACGTGCACCTTGACCACTACAACTGCCTTGAAGTGCTGGTGCTCAAGGGCGAGCC
CAAGCGCATGCGCGCTCTGGCCGACAAGCTGATCGCCTGCCGCGGCGTCAAGCACGGCACGTTTACCGGCACTACCACAG
GAGAGGATCTGGCATAA

Upstream 100 bases:

>100_bases
CCGTGCAGGTATGGGAAATCCGCCGCGTCTGACGCGGCCGCAACACAAACAGAACAGCGCGCCGCCCTTATTCAGGCGGA
AAGCGCCGCAGGACACTGCT

Downstream 100 bases:

>100_bases
TGGAAGACGTGCAAAGCCATGCCCCGCAAATCCCCCTGAACATAGACCGCGTGGGCGTGCGAGAGCTTCGGCTGCCCCTG
CTCGTGCGCGACCGTACCCG

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGNLARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNSDAHGAGTLTLVYDHHKNDLSRRLVQIQHDD
HDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRGVKHGTFTGTTTGEDLA

Sequences:

>Translated_138_residues
MGNLARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNSDAHGAGTLTLVYDHHKNDLSRRLVQIQHDD
HDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRGVKHGTFTGTTTGEDLA
>Mature_137_residues
GNLARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNSDAHGAGTLTLVYDHHKNDLSRRLVQIQHDDH
DLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIACRGVKHGTFTGTTTGEDLA

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=106, Percent_Identity=50, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_DESDA (B8J1Q4)

Other databases:

- EMBL:   CP001358
- RefSeq:   YP_002480340.1
- GeneID:   7285477
- GenomeReviews:   CP001358_GR
- KEGG:   dds:Ddes_1765
- HOGENOM:   HBG646378
- ProtClustDB:   PRK04460
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15680; Mature: 15549

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNSDAHGAGTLTL
CCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VYDHHKNDLSRRLVQIQHDDHDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIAC
EEECCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHH
RGVKHGTFTGTTTGEDLA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GNLARFGVSLDQDLLEPFDELCRRKSYPNRSEAIRDLIRKALVEEKWNSDAHGAGTLTL
CCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
VYDHHKNDLSRRLVQIQHDDHDLIVTTLHVHLDHYNCLEVLVLKGEPKRMRALADKLIAC
EEECCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHH
RGVKHGTFTGTTTGEDLA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA