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The map label for this gene is yfcE [H]

Identifier: 220905010

GI number: 220905010

Start: 2112319

End: 2112885

Strand: Direct

Name: yfcE [H]

Synonym: Ddes_1746

Alternate gene names: 220905010

Gene position: 2112319-2112885 (Clockwise)

Preceding gene: 220905009

Following gene: 220905011

Centisome position: 73.51

GC content: 63.14

Gene sequence:

>567_bases
ATGCGCCTGCTTGTTGCCTCGGACCTGCACGGTTCCATTGAAAGCCTGCGCTTTCTGATAGAAAAAGCCCGCCAGACAAA
GCCCCACCTGCTGGTGCTTCTGGGCGACCTTGTCTATCACGGGCCGCGCAACCCCCTGCCTCAGGGGTATGACACCCCCT
CGGTTCTGCGCGAAATGCCCGACCTTTCGTCCCTGCCCTGCCCGGTCAGCGCCGTACGCGGCAATTGCGATGCCGAGGTG
GATCTGGCCCTTCTGCCTTTTCCAGTAACTGAAACCGCATGGCTTGAAGCTGACGGACTGCATATTTTCGCCAGCCACGG
GCATCACCTGCCGGAAAATCCGCCCTGCCCCGGGCTGAAGCCCGGCACGGTCATTCTGCGCGGGCACACCCACATCCCCA
GGGGAGAAACCCTGGACGGCCTGCACTTCTGGAATCCCGGCTCCCTCTCGCTGCCCAAAGGCGGCTCGCCCCGCAGCTAC
GGCTTTTATGAGGACGGCCTTTTCCGCGTGCTGGACATGCAGGACCGCGAAGTGCTCCGTCACGTCCCGGCCGCCAACGA
GGCATAA

Upstream 100 bases:

>100_bases
TGTACCCCGTGCGGGAAGACATCCCCGTCATGCTGGTGGAAGAAGCCGAAGACAGGCCCACCTGGAACGCCCGCCACCCT
GAGGCCAGGGAGCGCTCCTG

Downstream 100 bases:

>100_bases
GGCCCCCGTTCGCGCCTTCAACCGGGCATAAATACAGACAGTCACATGGCAGAAAACCACGCCCCACGCCCCGCTCTTTT
TTCCCTGGCCCCAGACTGCA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRLLVASDLHGSIESLRFLIEKARQTKPHLLVLLGDLVYHGPRNPLPQGYDTPSVLREMPDLSSLPCPVSAVRGNCDAEV
DLALLPFPVTETAWLEADGLHIFASHGHHLPENPPCPGLKPGTVILRGHTHIPRGETLDGLHFWNPGSLSLPKGGSPRSY
GFYEDGLFRVLDMQDREVLRHVPAANEA

Sequences:

>Translated_188_residues
MRLLVASDLHGSIESLRFLIEKARQTKPHLLVLLGDLVYHGPRNPLPQGYDTPSVLREMPDLSSLPCPVSAVRGNCDAEV
DLALLPFPVTETAWLEADGLHIFASHGHHLPENPPCPGLKPGTVILRGHTHIPRGETLDGLHFWNPGSLSLPKGGSPRSY
GFYEDGLFRVLDMQDREVLRHVPAANEA
>Mature_188_residues
MRLLVASDLHGSIESLRFLIEKARQTKPHLLVLLGDLVYHGPRNPLPQGYDTPSVLREMPDLSSLPCPVSAVRGNCDAEV
DLALLPFPVTETAWLEADGLHIFASHGHHLPENPPCPGLKPGTVILRGHTHIPRGETLDGLHFWNPGSLSLPKGGSPRSY
GFYEDGLFRVLDMQDREVLRHVPAANEA

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=185, Percent_Identity=40, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20650; Mature: 20650

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVASDLHGSIESLRFLIEKARQTKPHLLVLLGDLVYHGPRNPLPQGYDTPSVLREMP
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHCC
DLSSLPCPVSAVRGNCDAEVDLALLPFPVTETAWLEADGLHIFASHGHHLPENPPCPGLK
CCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCC
PGTVILRGHTHIPRGETLDGLHFWNPGSLSLPKGGSPRSYGFYEDGLFRVLDMQDREVLR
CCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
HVPAANEA
HCCCCCCC
>Mature Secondary Structure
MRLLVASDLHGSIESLRFLIEKARQTKPHLLVLLGDLVYHGPRNPLPQGYDTPSVLREMP
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHCC
DLSSLPCPVSAVRGNCDAEVDLALLPFPVTETAWLEADGLHIFASHGHHLPENPPCPGLK
CCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCC
PGTVILRGHTHIPRGETLDGLHFWNPGSLSLPKGGSPRSYGFYEDGLFRVLDMQDREVLR
CCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
HVPAANEA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]