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The map label for this gene is trpH [H]

Identifier: 220905008

GI number: 220905008

Start: 2111104

End: 2111964

Strand: Reverse

Name: trpH [H]

Synonym: Ddes_1744

Alternate gene names: 220905008

Gene position: 2111964-2111104 (Counterclockwise)

Preceding gene: 220905013

Following gene: 220905007

Centisome position: 73.5

GC content: 60.28

Gene sequence:

>861_bases
ATGGAACTGGTTGATCTGCATACCCACACCAGAGCGTCCGACGGTACTGATTCTCCGGCGCAACTGATGGCCAAAGCCGC
TGAGGCTGGTCTCAAAGCCGTTGCCGTAACAGACCATGATACGCTTGCCGGTCTGGACGAGGCCGCTGCCGCCGGACGTG
AGCTGGGGGTGGAACTCATACGCGGCTGCGAAATTTCCACAAGCACAGAGCTGGGCGAATTGCATATTCTGGGCCTGTGG
CTGCCCGAACAGCCCGAAGCCCTGCTGCAAAAGCTTGCCTTTTTGCGTGAAAAGCGCGGTGAGCGTAATGAAGGCATTGT
GCGCAAGCTGCAAGACCTCGGGCTGGATGTCAGCATGGAGGAAGTGCTGGCTGCAGCCATGGGCGAAAGCGTGGGGCGGC
CCCACATTGCCGATGTGCTGCTGCGCAAGGGGTACGCCAAAAACATACGTGAAGTTTTCAAGGAATATCTGGGCAACCAC
GGCAAGGCCTATCTGCCCAAAGAAGTGCTGGAGCCGGAGGAAATCGTGCGGCTGCTGGCAGACCTTGGCGCTACCGTGAG
CCTGGCGCATCCCCTGTTATGGAAAGCGCCGACCGGTTGGCTTGAGGCGCAGGTAGCCCACCTCAAGGATTGCGGCCTGA
ACGCCATTGAAGCGTGGCACAGCGAACATTCAGAAGCGGATGCACGCACATGTCTGGCCCTGGCCAGGCGCTTTGACCTC
GGCATCAGCGGCGGGTCGGACTATCATGGCGTCAACAAACCCGCCATTCAGCTTGGGCGTGGCTACGGCGGACTGCGTGT
GGGCATTGGCGTGCTGGATGACCTGCGCGAGCGCCGCATAAAGATGGGCCTGCCTGTCTGA

Upstream 100 bases:

>100_bases
ATGGCCCGACAGTGTAACGTGATGCCCCTCCCAGTTCAAGGCTTGCACCCTATTGATATTTTGCGCTATCAATAACAGTC
ATCCCTCAAGGTAGTATTTT

Downstream 100 bases:

>100_bases
TTTGGAGCATTGCGCCGCACTGGCGCGACACTGGCAGCCTGTGTCTTTGCCGTCTGCGCCGACGAACAGAACCCAGTATC
TTCATTTTTCTGCCGCCACC

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MELVDLHTHTRASDGTDSPAQLMAKAAEAGLKAVAVTDHDTLAGLDEAAAAGRELGVELIRGCEISTSTELGELHILGLW
LPEQPEALLQKLAFLREKRGERNEGIVRKLQDLGLDVSMEEVLAAAMGESVGRPHIADVLLRKGYAKNIREVFKEYLGNH
GKAYLPKEVLEPEEIVRLLADLGATVSLAHPLLWKAPTGWLEAQVAHLKDCGLNAIEAWHSEHSEADARTCLALARRFDL
GISGGSDYHGVNKPAIQLGRGYGGLRVGIGVLDDLRERRIKMGLPV

Sequences:

>Translated_286_residues
MELVDLHTHTRASDGTDSPAQLMAKAAEAGLKAVAVTDHDTLAGLDEAAAAGRELGVELIRGCEISTSTELGELHILGLW
LPEQPEALLQKLAFLREKRGERNEGIVRKLQDLGLDVSMEEVLAAAMGESVGRPHIADVLLRKGYAKNIREVFKEYLGNH
GKAYLPKEVLEPEEIVRLLADLGATVSLAHPLLWKAPTGWLEAQVAHLKDCGLNAIEAWHSEHSEADARTCLALARRFDL
GISGGSDYHGVNKPAIQLGRGYGGLRVGIGVLDDLRERRIKMGLPV
>Mature_286_residues
MELVDLHTHTRASDGTDSPAQLMAKAAEAGLKAVAVTDHDTLAGLDEAAAAGRELGVELIRGCEISTSTELGELHILGLW
LPEQPEALLQKLAFLREKRGERNEGIVRKLQDLGLDVSMEEVLAAAMGESVGRPHIADVLLRKGYAKNIREVFKEYLGNH
GKAYLPKEVLEPEEIVRLLADLGATVSLAHPLLWKAPTGWLEAQVAHLKDCGLNAIEAWHSEHSEADARTCLALARRFDL
GISGGSDYHGVNKPAIQLGRGYGGLRVGIGVLDDLRERRIKMGLPV

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=262, Percent_Identity=33.969465648855, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31000; Mature: 31000

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVDLHTHTRASDGTDSPAQLMAKAAEAGLKAVAVTDHDTLAGLDEAAAAGRELGVELI
CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHCHHHHHHHHHHHHHHHH
RGCEISTSTELGELHILGLWLPEQPEALLQKLAFLREKRGERNEGIVRKLQDLGLDVSME
HCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH
EVLAAAMGESVGRPHIADVLLRKGYAKNIREVFKEYLGNHGKAYLPKEVLEPEEIVRLLA
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHH
DLGATVSLAHPLLWKAPTGWLEAQVAHLKDCGLNAIEAWHSEHSEADARTCLALARRFDL
HHCCHHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
GISGGSDYHGVNKPAIQLGRGYGGLRVGIGVLDDLRERRIKMGLPV
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELVDLHTHTRASDGTDSPAQLMAKAAEAGLKAVAVTDHDTLAGLDEAAAAGRELGVELI
CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHCHHHHHHHHHHHHHHHH
RGCEISTSTELGELHILGLWLPEQPEALLQKLAFLREKRGERNEGIVRKLQDLGLDVSME
HCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHH
EVLAAAMGESVGRPHIADVLLRKGYAKNIREVFKEYLGNHGKAYLPKEVLEPEEIVRLLA
HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHH
DLGATVSLAHPLLWKAPTGWLEAQVAHLKDCGLNAIEAWHSEHSEADARTCLALARRFDL
HHCCHHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
GISGGSDYHGVNKPAIQLGRGYGGLRVGIGVLDDLRERRIKMGLPV
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]