Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904986

Identifier: 220904986

GI number: 220904986

Start: 2082677

End: 2083825

Strand: Direct

Name: 220904986

Synonym: Ddes_1722

Alternate gene names: NA

Gene position: 2082677-2083825 (Clockwise)

Preceding gene: 220904985

Following gene: 220904987

Centisome position: 72.48

GC content: 54.74

Gene sequence:

>1149_bases
ATGAACAGACGTGAATTCATCAAAGGAGCCGCCCTGGGTGTAGGCGCGGGAACACTGGGCGCCATGGGCATATATTCCTA
CTCGCCCATGCGCCGTGCCTTTCTCAAGGATGCGCAGCGCGGCTCGACGGATATCGGCATGTGCAAGGCCATACGCATTA
CCAACATTTCAGAAACAAGCTGGTTCGACAACGGCGTGCTTATGCAGGACGTCACCAGCGCCGGCGGCCTGCTGGTTGAC
CAGTATACCTTCAACTGGCCGCCTTTCGGCAACGGCAAAGGAGTCGGCAAGGGCAGCTATGCAGAGGGCATCAAACATAT
CAAGCATCTTTTGCCCAAAAAACTGGACGAGGCATGGGAAATCACCCGTGAAAAAAGCGTGCATGCCGATAATGCAGGGG
GTTTCTCCTGCCTGATCGAAGTGGAAGCCCTGGACGGCTCCGTAACCAAATACCTGTTTGACACCGGCTGGAACTATGTG
TGGATGGACGCCTGCTACAAGCGTGAAGGCATAGATGTCATGCTTGCCAACAACGAGATCAAGGCTTTCATCCAGACGCA
CGAGCATATGGACCATTACTGGGGCCTGCCGGCTGTCACCAAATACAATCCCGATATTCCGGTATACATACCCAATACCT
TCTATCCCGAAGGCAAGCAGTACCTCAAGGACTGCGGACACGTCGGAAAACTTACAGAAGTTCCCAAGGGGCTGCACAAG
CTGGAAAACGGCGTGGCGCTGTATACCTTTGACTGCCCTATCATTTTCCGCGTTTTCGGCGAGCTTTCCATGTACTGCAA
CGTAAAGGACGTGGGCCTTGTAAGCATTACCGGCTGCTGCCATCAGGGTATCATCCTTTTTGCCGACACCGCCTACAAGG
AACTGGCCTATGAAAACGACCAGTTCTACGGCCTCTACGGCGGGCTGCACATCTCGCCCTTTGACGACTGGGACCCCAAG
TATGACGACCTCGTCATCGGATTGAAAAAATGGGATCTGCAACGGGTCGGATGCAACCACTGCACAGGACTCATTACGGC
GCAAAAATTCGTGGACGCGGGCTATCCCGTGGTCAAGGGCACGGCGCGCTTCCGCTCCAAGACCACCAACTATCTCGGCA
ACGGCGACGTTATCACCTTCCCCTCCTGA

Upstream 100 bases:

>100_bases
ATCGTGGCAGGCGTGGCTGTGTACTTTGCCATCGTGGCGGCGCTGCCCTGGTTCAGCGCGCACTTCACCCTGGTCCAGTA
GAGGCCAGCAGGGGGATGAT

Downstream 100 bases:

>100_bases
CTCTGAACACCCCTGCGGGACCAGGCATGCCGTCCAGGTCCCGCAGAGCCATCCGGCGCGCCACCACGCGCCACAACCAG
GGAGCCGCCATGCATCTGCA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Beta-Lactamase

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD
QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV
WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK
LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK
YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS

Sequences:

>Translated_382_residues
MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD
QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV
WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK
LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK
YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS
>Mature_382_residues
MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD
QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV
WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK
LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK
YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS

Specific function: Unknown

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42598; Mature: 42598

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETS
CCHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
WFDNGVLMQDVTSAGGLLVDQYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWE
CCCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYVWMDACYKREGIDVMLANNEI
HHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH
KAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK
HHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYEND
HHCCCEEEEECCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCC
QFYGLYGGLHISPFDDWDPKYDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKG
CEEEEECCCEECCCCCCCCCCCCEEEEHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEC
TARFRSKTTNYLGNGDVITFPS
HHHHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure
MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETS
CCHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
WFDNGVLMQDVTSAGGLLVDQYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWE
CCCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYVWMDACYKREGIDVMLANNEI
HHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH
KAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK
HHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYEND
HHCCCEEEEECCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCC
QFYGLYGGLHISPFDDWDPKYDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKG
CEEEEECCCEECCCCCCCCCCCCEEEEHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEC
TARFRSKTTNYLGNGDVITFPS
HHHHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA