| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is lldR [C]
Identifier: 220904983
GI number: 220904983
Start: 2080268
End: 2080912
Strand: Direct
Name: lldR [C]
Synonym: Ddes_1719
Alternate gene names: 220904983
Gene position: 2080268-2080912 (Clockwise)
Preceding gene: 220904973
Following gene: 220904984
Centisome position: 72.4
GC content: 62.48
Gene sequence:
>645_bases ATGACTACACCTGCCACTACGGAACGACGTCTGGAACAGGCACTGCTGAAAGGGCACTGGAACCTTTTTGAACGGCTGCC CGCAGAGCGCCTGCTGGCGGAAAAGCTCGGCGTGAGCCGGGCCACACTGCGCACGGCGTTGCGCACCCTGGTGGGCCGCG GAATACTGGAAACCAGGCGCGGCAGCGGCACCTTCGTAAAAGCACTGCCCTGCCGCTCCGACAATGCCAGTCTGGCGGAC AGCCTGCGGGCCTTCCGCATTGTGATGCCGCACCTGCTTATGACGGCACAGCCATCTTTCGCCCCTTCGGCCATATTCAC GCTGGAGCGCCAGCTATCTGCTGCCGGCATGGCGCTGCATGCGGACGACATGCGGCTTTTCGCGCAATATCACCTGCAGT TTTTTTCCGCCTTGCTACAGGGACTTTCCAATACCCGTCTGGCCCAGGCCGGAGCGGCAACCCTGCCGGATGCCCACGCC CTCGCGCGGCTTTTGCAGGACTGCCCGCCCATACGCCTTGAGGAAATATTCAAGCATCTTGCCCGCACCCTGCATGGCCT GCGCCACGCAGATCCGCAGGCATCATCTGCCGCCCTGTCGGCTTACGCTGCCTGCCTTTTACAGGGCATGGGAGAAGAAG CATGA
Upstream 100 bases:
>100_bases GTGCAATAAAAGAAATATATACAATATTTTCCGGAATATTGTCATAAAAATCCCAAAGGGACAGAATCAACACAACAAGA CAAACCTGCAGGGGAAGGCC
Downstream 100 bases:
>100_bases CCGGCACGAGCAGAAGAAATTTCTTGCGGGGGATGTGGCGCGCGCGCCCTCTGTCTGTGACGGATGAAGCCCCCTTTTCG GCGGCCGCTCCTGATGGGCC
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator GntR Family; GntR Domain Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTTPATTERRLEQALLKGHWNLFERLPAERLLAEKLGVSRATLRTALRTLVGRGILETRRGSGTFVKALPCRSDNASLAD SLRAFRIVMPHLLMTAQPSFAPSAIFTLERQLSAAGMALHADDMRLFAQYHLQFFSALLQGLSNTRLAQAGAATLPDAHA LARLLQDCPPIRLEEIFKHLARTLHGLRHADPQASSAALSAYAACLLQGMGEEA
Sequences:
>Translated_214_residues MTTPATTERRLEQALLKGHWNLFERLPAERLLAEKLGVSRATLRTALRTLVGRGILETRRGSGTFVKALPCRSDNASLAD SLRAFRIVMPHLLMTAQPSFAPSAIFTLERQLSAAGMALHADDMRLFAQYHLQFFSALLQGLSNTRLAQAGAATLPDAHA LARLLQDCPPIRLEEIFKHLARTLHGLRHADPQASSAALSAYAACLLQGMGEEA >Mature_213_residues TTPATTERRLEQALLKGHWNLFERLPAERLLAEKLGVSRATLRTALRTLVGRGILETRRGSGTFVKALPCRSDNASLADS LRAFRIVMPHLLMTAQPSFAPSAIFTLERQLSAAGMALHADDMRLFAQYHLQFFSALLQGLSNTRLAQAGAATLPDAHAL ARLLQDCPPIRLEEIFKHLARTLHGLRHADPQASSAALSAYAACLLQGMGEEA
Specific function: May Be A Regulatory Protein For The Lct Genes. [C]
COG id: COG2186
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23375; Mature: 23244
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPATTERRLEQALLKGHWNLFERLPAERLLAEKLGVSRATLRTALRTLVGRGILETRR CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCC GSGTFVKALPCRSDNASLADSLRAFRIVMPHLLMTAQPSFAPSAIFTLERQLSAAGMALH CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ADDMRLFAQYHLQFFSALLQGLSNTRLAQAGAATLPDAHALARLLQDCPPIRLEEIFKHL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH ARTLHGLRHADPQASSAALSAYAACLLQGMGEEA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTPATTERRLEQALLKGHWNLFERLPAERLLAEKLGVSRATLRTALRTLVGRGILETRR CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCC GSGTFVKALPCRSDNASLADSLRAFRIVMPHLLMTAQPSFAPSAIFTLERQLSAAGMALH CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ADDMRLFAQYHLQFFSALLQGLSNTRLAQAGAATLPDAHALARLLQDCPPIRLEEIFKHL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH ARTLHGLRHADPQASSAALSAYAACLLQGMGEEA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA