| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904965
Identifier: 220904965
GI number: 220904965
Start: 2052285
End: 2052824
Strand: Direct
Name: 220904965
Synonym: Ddes_1701
Alternate gene names: NA
Gene position: 2052285-2052824 (Clockwise)
Preceding gene: 220904964
Following gene: 220904966
Centisome position: 71.42
GC content: 60.37
Gene sequence:
>540_bases ATGCGTTTTACCCATTTTTTCCTGCTGCTTCTGATCTGCGCCCTGAGTATGGGCAGTGCCGCCCATGCCGGGCAGCCTGC CCCTGACGTGAACGGAGCGGAGGTCAGGGATTTCACCCGCTTCAGCGCGGCCCTGCCCGCCGGATGGGACGGAGAGGAAC GCACGGGCTTTCATTCTGGTAAGGCCGAAGAGTGCATGCTGATTCTGGGCGTCAAGGATCAGGCCGGGGAAAACTACCAG GGGCTTGTCAGCATTTTTGTGCTGCCCAACGACAAGCAGACCACAAGCGAAAGCTTTGCCCGTGAGCTGACGCGCTTTCA GGCCGATGCCACCGAGCCGGCGCAAGAAGGCCGTTTCTGGGTATTTACAGGCGAACCGCGCAGTCAGGCGTTCAAAGCCC CGGCCCTGACAAAGGTTCATGCCACGCCCGAAATGGTACTCATTGCCATTATCCAGGACCCGGAAGGCCTGGGCGGTCAG GCTGTTTTTGAAAGCCTGCGGGGCCTCACGCCCCAGACCCGCCAACTTCTCGGCAAATAG
Upstream 100 bases:
>100_bases CGTTCATCACCACCCTGCTGCATAGCGCGGCCTGAGGCGCGCAAAAAACACGCCGTCTCCGGCTGCACGGACCATAACGC CAAGACAAAGCGAGGCCAGT
Downstream 100 bases:
>100_bases CCTGCCCTTGTAGGGCATTTCACACTTGAAATACGTTACAAGGACTTGTCTCCAAATCCTTGTAGCCAAATGATTGCAGG GCGGCTTTGCCGACCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRFTHFFLLLLICALSMGSAAHAGQPAPDVNGAEVRDFTRFSAALPAGWDGEERTGFHSGKAEECMLILGVKDQAGENYQ GLVSIFVLPNDKQTTSESFARELTRFQADATEPAQEGRFWVFTGEPRSQAFKAPALTKVHATPEMVLIAIIQDPEGLGGQ AVFESLRGLTPQTRQLLGK
Sequences:
>Translated_179_residues MRFTHFFLLLLICALSMGSAAHAGQPAPDVNGAEVRDFTRFSAALPAGWDGEERTGFHSGKAEECMLILGVKDQAGENYQ GLVSIFVLPNDKQTTSESFARELTRFQADATEPAQEGRFWVFTGEPRSQAFKAPALTKVHATPEMVLIAIIQDPEGLGGQ AVFESLRGLTPQTRQLLGK >Mature_179_residues MRFTHFFLLLLICALSMGSAAHAGQPAPDVNGAEVRDFTRFSAALPAGWDGEERTGFHSGKAEECMLILGVKDQAGENYQ GLVSIFVLPNDKQTTSESFARELTRFQADATEPAQEGRFWVFTGEPRSQAFKAPALTKVHATPEMVLIAIIQDPEGLGGQ AVFESLRGLTPQTRQLLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19481; Mature: 19481
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTHFFLLLLICALSMGSAAHAGQPAPDVNGAEVRDFTRFSAALPAGWDGEERTGFHSG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC KAEECMLILGVKDQAGENYQGLVSIFVLPNDKQTTSESFARELTRFQADATEPAQEGRFW CCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCEE VFTGEPRSQAFKAPALTKVHATPEMVLIAIIQDPEGLGGQAVFESLRGLTPQTRQLLGK EEECCCHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MRFTHFFLLLLICALSMGSAAHAGQPAPDVNGAEVRDFTRFSAALPAGWDGEERTGFHSG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC KAEECMLILGVKDQAGENYQGLVSIFVLPNDKQTTSESFARELTRFQADATEPAQEGRFW CCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCEE VFTGEPRSQAFKAPALTKVHATPEMVLIAIIQDPEGLGGQAVFESLRGLTPQTRQLLGK EEECCCHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA