| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is kdpB [H]
Identifier: 220904943
GI number: 220904943
Start: 2017809
End: 2019887
Strand: Direct
Name: kdpB [H]
Synonym: Ddes_1678
Alternate gene names: 220904943
Gene position: 2017809-2019887 (Clockwise)
Preceding gene: 220904942
Following gene: 220904944
Centisome position: 70.22
GC content: 59.26
Gene sequence:
>2079_bases ATGTCAGCAAAAACAAGCAATCCCGCCAACACGAACTGCATTCTCTGGCAGGCGCTGGCTGCATCGCTGGTCAAGCTGTC GCCCCGTGACCAGGTACGAAATTTCGTCATGTTCACCGTCTACCTTTCCGCCATTCTGGCAACGGGGCTGACCGTGCTGG GGGCCGCAAACATACTTTCGCCCGCCACGGCGCAGACGGGATTTGCAGGCGCCATTGCGATCATCCTGTGGTTTACTGTA TTTTTTGCCAATTTTGCCGAGTCCATCGCCGAGGGCCGCGGCAAAGCCCAGGCCGAAAGCCTGCGCAAGGCACGCAGAAA CGTTACCGCACGCAAACTTGCCGACCCGGCCATGCACGATGAGCACGAAATCGTACCCTCCACAACCCTCAAGCCCGGCG ACAGCATCCTGGTGTATGCCGGTGAACAGATCCCCGCCGACGGCGATGTAACGGAAGGCGCGGCATCGGTGGATGAAAGC GCCATCACGGGCGAATCCGCCCCGGTTATCCGTGAAAGCGGCGGTGACCGCTGCGCGGTTACCGGTGGCACTACAGTTCT TTCCGACTGGCTGGTCATACGGGTCACCAGCGAGGTGGGCCGCAGCTTTCTGGACAGGATGATCGCCATGGTTGAAGGAG CCGCCCGCCAGAAAACTCCCAGCGAAGTCGCGCTGAATGTTCTACTGGTGGCACTTACCGTCATTTTTCTTCTGGTCACG GTATCGCTGTGGTGCTTTGCCCGCTTTACGGCCGGCCAGGAGCACGTTGCAAATCCGGTGGGTTTTGCCGCGCTGGTGGC GCTTTTTGTCTGCCTTGCGCCAACCACCATAGGTGCGCTGCTTTCCGCCATTGGTATTGCAGGCATGAGCCGCCTCAACC GAGCCAATGTGCTGGCCATGAGTGGGCGGGCCATTGAGGCCGCCGGAGATGTGGATGTTCTGCTGCTGGATAAAACAGGA ACCATCACGCTGGGCAATCGTCAGGCCGTGGAATTCATTCCCGTAGACGGCCATAGCGGCGAGGAGCTTGCTGATGCGGC CCAGTTGGCCTCACTGGCCGATGAAACCCCCGAAGGACGCAGCATTGTACAGCTTGCCCGTGATCAATTCACCCGCTGCG ACATGAGTTTGCATGGCAAAGACGCTGTTTTTATTCCTTTTTCTGCGCAAACTCGCATGAGCGGCGTGGATGTGGCAGGA AAGCACATCCGCAAGGGCGCTGCCGATGCCGTGCGGGCTTTTGTTGAAAAGAATGGCGGCAGTGAAAGCCTGCGCTGTGA GGAGGCGGTCAACGCCATAGCACGCCAGGGCGGTACTCCCCTGGTGGTGGCGCGCGAAAGCAGCATCCTCGGGGTCATAC ATCTCAAGGACATTATCAAAGACGGTGTCAAGGAGCGTTTTGCAGAACTGCGCCGCATGGGCATCAGGACTGTCATGGTC ACCGGCGACAATCCGCTCACTGCGGCGGCCATCGCGGCAGAAGCCGGAGTTGACGATTTTCTTGCCGGGGCCACCCCCGA AACAAAGCTGTCTCTCATACGCGAATTCCAGGCACGGGGTCATCTGGTTGCCATGACAGGCGATGGGACCAACGACGCTC CCGCCCTGGCGCAGGCCGATGTGGCCGTGGCCATGAATACGGGGACACAGGCCGCCAAAGAGGCAGGCAATATGGTGGAT CTGGACTCATCGCCCACCAAACTGCTGGATATCGTGCGCATCGGCAAGCAGCTGCTCATGACGCGCGGCAGCCTGACCAC GTTTTCTCTGGCGAACGATGCGGCCAAATACTTCGCCATCATTCCGGCACTGTTCGTGAGTCTGTATCCGGGACTGGCCG CTCTCAACATCATGAACCTGCACAGCCCGCAAAGTGCCGTTCTTTCAGCCACCATATACAATGCACTTATCATAGTGGCG CTTATCCCCCTGGCCCTGCGCGGCGTGAAATACCGCGAAGAAAGTTCGGGGCAACTCCTGCGGCGCAACCTGCTTGTTTA TGGTCTGGGGGGACTGGCCGCGCCTTTTGCGGCCATCAAGCTTATCGACATGTGTCTGACCGGCCTAGACCTGGTCTGA
Upstream 100 bases:
>100_bases CTCTGGCGCTCGGGCCTCTGGCAGAACATCTGCAAATGACGCGCTGAACTGACCGGAGTGTACCGCAAACCGGCTACCCA TATTTTATAAGGATACAATC
Downstream 100 bases:
>100_bases GGAGAAAAAATGCTCATCATAACACTGTTGCGACGTTCCGCACTGTTTCTGGCCCTCATGACGGCAGTTGTCATTGCCTA CACACTGGTAGTCACGGCGG
Product: K+-transporting ATPase subunit B
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] B chain; Potassium-binding and translocating subunit B; Potassium-translocating ATPase B chain [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILSPATAQTGFAGAIAIILWFTV FFANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHDEHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDES AITGESAPVIRESGGDRCAVTGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVT VSLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAMSGRAIEAAGDVDVLLLDKTG TITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGRSIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAG KHIRKGAADAVRAFVEKNGGSESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMV TGDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVD LDSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAIIPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVA LIPLALRGVKYREESSGQLLRRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV
Sequences:
>Translated_692_residues MSAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILSPATAQTGFAGAIAIILWFTV FFANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHDEHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDES AITGESAPVIRESGGDRCAVTGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVT VSLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAMSGRAIEAAGDVDVLLLDKTG TITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGRSIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAG KHIRKGAADAVRAFVEKNGGSESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMV TGDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVD LDSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAIIPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVA LIPLALRGVKYREESSGQLLRRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV >Mature_691_residues SAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILSPATAQTGFAGAIAIILWFTVF FANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHDEHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDESA ITGESAPVIRESGGDRCAVTGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVTV SLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAMSGRAIEAAGDVDVLLLDKTGT ITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGRSIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAGK HIRKGAADAVRAFVEKNGGSESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMVT GDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDL DSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAIIPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVAL IPLALRGVKYREESSGQLLRRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2216
COG function: function code P; High-affinity K+ transport system, ATPase chain B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=506, Percent_Identity=27.4703557312253, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI55743073, Length=489, Percent_Identity=26.3803680981595, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI115529486, Length=570, Percent_Identity=25.2631578947368, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI118498343, Length=593, Percent_Identity=24.6205733558179, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI48762685, Length=691, Percent_Identity=23.0101302460203, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI48762691, Length=691, Percent_Identity=23.0101302460203, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI48762687, Length=654, Percent_Identity=23.0886850152905, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI48762689, Length=691, Percent_Identity=23.0101302460203, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1786914, Length=676, Percent_Identity=63.7573964497041, Blast_Score=808, Evalue=0.0, Organism=Escherichia coli, GI1786691, Length=455, Percent_Identity=31.4285714285714, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI1789879, Length=467, Percent_Identity=31.6916488222698, Blast_Score=152, Evalue=9e-38, Organism=Escherichia coli, GI2367363, Length=647, Percent_Identity=25.193199381762, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17556548, Length=483, Percent_Identity=25.4658385093168, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71997262, Length=612, Percent_Identity=25, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997275, Length=612, Percent_Identity=25, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997269, Length=585, Percent_Identity=25.2991452991453, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI193210130, Length=253, Percent_Identity=24.901185770751, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17554158, Length=253, Percent_Identity=24.901185770751, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71988506, Length=253, Percent_Identity=24.901185770751, Blast_Score=76, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17557486, Length=227, Percent_Identity=26.431718061674, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17557770, Length=220, Percent_Identity=25.9090909090909, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI32566766, Length=220, Percent_Identity=25.9090909090909, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320475, Length=473, Percent_Identity=26.8498942917548, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6321430, Length=531, Percent_Identity=28.4369114877589, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6325221, Length=531, Percent_Identity=28.060263653484, Blast_Score=120, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6321271, Length=643, Percent_Identity=24.4167962674961, Blast_Score=117, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6319772, Length=523, Percent_Identity=21.9885277246654, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI221329854, Length=161, Percent_Identity=37.2670807453416, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006391 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 72742; Mature: 72611
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILS CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PATAQTGFAGAIAIILWFTVFFANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCC EHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDESAITGESAPVIRESGGDRCAV CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEEE TGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVT ECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VSLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAM HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SGRAIEAAGDVDVLLLDKTGTITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGR CCCEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCH SIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAGKHIRKGAADAVRAFVEKNGG HHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCC SESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMV CCCCCHHHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TGDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQAD ECCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCC VAVAMNTGTQAAKEAGNMVDLDSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAI EEEEECCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH IPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVALIPLALRGVKYREESSGQLL HHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV HHHHHHEECCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAKTSNPANTNCILWQALAASLVKLSPRDQVRNFVMFTVYLSAILATGLTVLGAANILS CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PATAQTGFAGAIAIILWFTVFFANFAESIAEGRGKAQAESLRKARRNVTARKLADPAMHD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCC EHEIVPSTTLKPGDSILVYAGEQIPADGDVTEGAASVDESAITGESAPVIRESGGDRCAV CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEEE TGGTTVLSDWLVIRVTSEVGRSFLDRMIAMVEGAARQKTPSEVALNVLLVALTVIFLLVT ECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VSLWCFARFTAGQEHVANPVGFAALVALFVCLAPTTIGALLSAIGIAGMSRLNRANVLAM HHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SGRAIEAAGDVDVLLLDKTGTITLGNRQAVEFIPVDGHSGEELADAAQLASLADETPEGR CCCEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCH SIVQLARDQFTRCDMSLHGKDAVFIPFSAQTRMSGVDVAGKHIRKGAADAVRAFVEKNGG HHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCC SESLRCEEAVNAIARQGGTPLVVARESSILGVIHLKDIIKDGVKERFAELRRMGIRTVMV CCCCCHHHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TGDNPLTAAAIAAEAGVDDFLAGATPETKLSLIREFQARGHLVAMTGDGTNDAPALAQAD ECCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCC VAVAMNTGTQAAKEAGNMVDLDSSPTKLLDIVRIGKQLLMTRGSLTTFSLANDAAKYFAI EEEEECCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH IPALFVSLYPGLAALNIMNLHSPQSAVLSATIYNALIIVALIPLALRGVKYREESSGQLL HHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RRNLLVYGLGGLAAPFAAIKLIDMCLTGLDLV HHHHHHEECCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA