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The map label for this gene is ndhG [H]

Identifier: 220904924

GI number: 220904924

Start: 1996418

End: 1997062

Strand: Reverse

Name: ndhG [H]

Synonym: Ddes_1659

Alternate gene names: 220904924

Gene position: 1997062-1996418 (Counterclockwise)

Preceding gene: 220904925

Following gene: 220904923

Centisome position: 69.5

GC content: 59.69

Gene sequence:

>645_bases
GTGTTTGGCGAAATTTTCTTTCTTTACTGCGCCGTTGTCATCGTTGTGTGCGGCATCCTGTCCATCAGGCTGCGCAATCC
GGTGCATTGCGTGCTTCTTGTGCTGCTGTTGTTCGTCCATATGGCCGCCGTCTATCTGACTCTTCAGGCCGAATTTCTGG
CAGCGGTGCAGATTGTGGTTTACGCCGGGGCCGTGCTTGTCATGTATCTTTTTGTGGTTTTTCTGGTGAACCTCAAGCGT
GAGATGCGCATGCCCGCCCTCGTGCCGCATCCCTGGGTGGGGTATGCCATTGGCATAGCGCTATGCGGCACTCTGCTCTG
GGGTTTGCGCTTTTTTATGGCTGGCGGCAAGGATGTGTGGCCCTATGAGGCCCTGCGCGAGGCGACCCACACGAGAGCGC
TGAGCCGCGAGCTGTTCACCCACAACTTTCTTGCTCTTGAAGTGGCCGGTGTGCTGTTGCTGGTGGCTCTTGTGGCGGCC
CTTGTGCTGGCGCGCAGGCAGCCCCTGCCCGGCACTGCTGAAGACTCCCCATGTGAAACGTATGGAGAAGCCCAGGGCAT
CGAGGCCCCGCAGTCTGGCGGCCAGAAGGGCGATGCCGCATGCGGCAGGGATCACAAAACACGGGATGGAGGGCTGGCGC
GATGA

Upstream 100 bases:

>100_bases
AGCGGCCCGGTCTTGCGGGCTGTTTTGCGTGATCAGGCAGCTTGAACAGGGCAGGATTGCCGGAAGAGCATGCACAAGTC
CATTCCGGGAGGTGGAAGAC

Downstream 100 bases:

>100_bases
TTCCTCTCTCATGGTACATGGCGCTGGCCACTGTGCTGTTCTGCATTGGTGTGGCCGGATTTCTTACGCGGCGCAATATT
ATTGTCATGCTGCTTTCCCT

Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I, chain 6; NDH-1, chain 6 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVVYAGAVLVMYLFVVFLVNLKR
EMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVWPYEALREATHTRALSRELFTHNFLALEVAGVLLLVALVAA
LVLARRQPLPGTAEDSPCETYGEAQGIEAPQSGGQKGDAACGRDHKTRDGGLAR

Sequences:

>Translated_214_residues
MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVVYAGAVLVMYLFVVFLVNLKR
EMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVWPYEALREATHTRALSRELFTHNFLALEVAGVLLLVALVAA
LVLARRQPLPGTAEDSPCETYGEAQGIEAPQSGGQKGDAACGRDHKTRDGGLAR
>Mature_214_residues
MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVVYAGAVLVMYLFVVFLVNLKR
EMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVWPYEALREATHTRALSRELFTHNFLALEVAGVLLLVALVAA
LVLARRQPLPGTAEDSPCETYGEAQGIEAPQSGGQKGDAACGRDHKTRDGGLAR

Specific function: NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton tran

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=171, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 23369; Mature: 23369

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVV
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGAVLVMYLFVVFLVNLKREMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYEALREATHTRALSRELFTHNFLALEVAGVLLLVALVAALVLARRQPLPGTAEDSPCET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
YGEAQGIEAPQSGGQKGDAACGRDHKTRDGGLAR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVV
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGAVLVMYLFVVFLVNLKREMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYEALREATHTRALSRELFTHNFLALEVAGVLLLVALVAALVLARRQPLPGTAEDSPCET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
YGEAQGIEAPQSGGQKGDAACGRDHKTRDGGLAR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA