| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904919
Identifier: 220904919
GI number: 220904919
Start: 1989812
End: 1991062
Strand: Reverse
Name: 220904919
Synonym: Ddes_1654
Alternate gene names: NA
Gene position: 1991062-1989812 (Counterclockwise)
Preceding gene: 220904920
Following gene: 220904918
Centisome position: 69.29
GC content: 58.51
Gene sequence:
>1251_bases ATGAAAAACAGATGGATGCTCGGTGGCAGCATGGTACTGTTGCTGCTGCTCGCCGTGGGCCAGGCTTTTGCGGCTGAAGG TTCCGCCCCGGCTGCCGACCCGGCTGCCGCGGCCCCCGCTCCGGCCCCTGAGGCCCCCAAGGCTCCGGTCAAGGCCATTG ACGACCCGGCCATTGCCGCCCAACTGCAAACGGCTCCGGCCGGTCTCAAGGGCGCCATTGCCGAGCAGATCAAGGCCGCT CCCGAAACCTATAACGCCAGCGCCGAGCCTGGCTATCTCGGTATTCCCGGCGGCCCCAAGATCAATATGCTTCTGGCTTT TGGCTGGGCCTTGTGGGTGGGCTGGATTTTCTCCACCGTGGGTGCCTTTGGCGGCGTTATGGCCGGCGTGGGACACATGA GCGTGCATGGCCTTGGCAACTACGCAAAGTCCTTTGGCAAAACGCCGCTCAACAAGGCTGTTACCGACTCGGTACGCGCC TCTAACCAGATGCTTGCCGGGCTTTCAGCCGTCATCAGTACCTTCAGTTATTATCGCCTGAAGCGTCTGGTTCTGCCCCT GGGCTTTGCCCTTGGCCTTGGTTCGATAGTGGGGGCGTACCTGTCTACCTCTCTCACTGCGGGCAAGCTGAATTTTTCAT CTTACCAGGGCTATTTCGGCCTTTTTGTACTGCTTTTGGGGCTTTATCTCATATGGGAAACCTCGCCCGCGGGCCAGCGC TCCAAAGCCAAGGCCAAAGAAGCCTCGAAGGCTTTTGAGGCCGCCGCCAAAGGCAAGGGCGACGGCACCTCGGCCCCTAC AGGCGTCAAACTTGTTTCTTTCAGCGTGACCCGCTGCGTCTTCACGTTTTGTGGTGTAGAATTTTCTTTTAACCCGCTGC TGCCTTTCATCGGCGGTGTCGTCATCGCCAGCATCGCGGCCTTTCTCGGCGTGGGTGGCGGTTTTCTGCTGGTTCCCTTC ATTACCAGCGTAACTTCCCTGCCTATGTACCTGGCCGCCGGTACTTCGGCTCTTGCCGTTCTGGTCAGCATGATCACGGG CATCACCACCCTTATGCTGCACGGCGTGATGGTGGACTGGAACCTGGTGAGCATCGAGCTTGTCGGGGTGGCGGTGGGTT CTATCATTGGACCTTTTACATCGCGATTTTTCTCTGAAATCTGGCTGAAGCGTCTCTTCATAGTGCTGGCCCTTTATGTG GGTACAGACTATGTGTTGCGTGGCTTCTTCCAGATCAGGATGTTCGGCTAG
Upstream 100 bases:
>100_bases TGGATTAATGTGTATTTTTGACAAGGGCTGATCCTGTGCCGCTCTCTTCGGGGCGCACATAATTCAGGTGTTGACAAAGC AAATCTGGAGGAGATTGTTT
Downstream 100 bases:
>100_bases AGCATTCCAGCCTGAGCTGTTCGCAAGGATTGGAGCAAATCCTTGTGTCGAAGCAGGCGGGGCAGGCTTTGCCCGCTGTG CACGGGTGCTTCAAGGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKNRWMLGGSMVLLLLLAVGQAFAAEGSAPAADPAAAAPAPAPEAPKAPVKAIDDPAIAAQLQTAPAGLKGAIAEQIKAA PETYNASAEPGYLGIPGGPKINMLLAFGWALWVGWIFSTVGAFGGVMAGVGHMSVHGLGNYAKSFGKTPLNKAVTDSVRA SNQMLAGLSAVISTFSYYRLKRLVLPLGFALGLGSIVGAYLSTSLTAGKLNFSSYQGYFGLFVLLLGLYLIWETSPAGQR SKAKAKEASKAFEAAAKGKGDGTSAPTGVKLVSFSVTRCVFTFCGVEFSFNPLLPFIGGVVIASIAAFLGVGGGFLLVPF ITSVTSLPMYLAAGTSALAVLVSMITGITTLMLHGVMVDWNLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYV GTDYVLRGFFQIRMFG
Sequences:
>Translated_416_residues MKNRWMLGGSMVLLLLLAVGQAFAAEGSAPAADPAAAAPAPAPEAPKAPVKAIDDPAIAAQLQTAPAGLKGAIAEQIKAA PETYNASAEPGYLGIPGGPKINMLLAFGWALWVGWIFSTVGAFGGVMAGVGHMSVHGLGNYAKSFGKTPLNKAVTDSVRA SNQMLAGLSAVISTFSYYRLKRLVLPLGFALGLGSIVGAYLSTSLTAGKLNFSSYQGYFGLFVLLLGLYLIWETSPAGQR SKAKAKEASKAFEAAAKGKGDGTSAPTGVKLVSFSVTRCVFTFCGVEFSFNPLLPFIGGVVIASIAAFLGVGGGFLLVPF ITSVTSLPMYLAAGTSALAVLVSMITGITTLMLHGVMVDWNLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYV GTDYVLRGFFQIRMFG >Mature_416_residues MKNRWMLGGSMVLLLLLAVGQAFAAEGSAPAADPAAAAPAPAPEAPKAPVKAIDDPAIAAQLQTAPAGLKGAIAEQIKAA PETYNASAEPGYLGIPGGPKINMLLAFGWALWVGWIFSTVGAFGGVMAGVGHMSVHGLGNYAKSFGKTPLNKAVTDSVRA SNQMLAGLSAVISTFSYYRLKRLVLPLGFALGLGSIVGAYLSTSLTAGKLNFSSYQGYFGLFVLLLGLYLIWETSPAGQR SKAKAKEASKAFEAAAKGKGDGTSAPTGVKLVSFSVTRCVFTFCGVEFSFNPLLPFIGGVVIASIAAFLGVGGGFLLVPF ITSVTSLPMYLAAGTSALAVLVSMITGITTLMLHGVMVDWNLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYV GTDYVLRGFFQIRMFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43288; Mature: 43288
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRWMLGGSMVLLLLLAVGQAFAAEGSAPAADPAAAAPAPAPEAPKAPVKAIDDPAIAA CCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH QLQTAPAGLKGAIAEQIKAAPETYNASAEPGYLGIPGGPKINMLLAFGWALWVGWIFSTV HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH GAFGGVMAGVGHMSVHGLGNYAKSFGKTPLNKAVTDSVRASNQMLAGLSAVISTFSYYRL HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLVLPLGFALGLGSIVGAYLSTSLTAGKLNFSSYQGYFGLFVLLLGLYLIWETSPAGQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH SKAKAKEASKAFEAAAKGKGDGTSAPTGVKLVSFSVTRCVFTFCGVEFSFNPLLPFIGGV HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VIASIAAFLGVGGGFLLVPFITSVTSLPMYLAAGTSALAVLVSMITGITTLMLHGVMVDW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEC NLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYVGTDYVLRGFFQIRMFG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MKNRWMLGGSMVLLLLLAVGQAFAAEGSAPAADPAAAAPAPAPEAPKAPVKAIDDPAIAA CCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH QLQTAPAGLKGAIAEQIKAAPETYNASAEPGYLGIPGGPKINMLLAFGWALWVGWIFSTV HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH GAFGGVMAGVGHMSVHGLGNYAKSFGKTPLNKAVTDSVRASNQMLAGLSAVISTFSYYRL HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLVLPLGFALGLGSIVGAYLSTSLTAGKLNFSSYQGYFGLFVLLLGLYLIWETSPAGQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH SKAKAKEASKAFEAAAKGKGDGTSAPTGVKLVSFSVTRCVFTFCGVEFSFNPLLPFIGGV HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VIASIAAFLGVGGGFLLVPFITSVTSLPMYLAAGTSALAVLVSMITGITTLMLHGVMVDW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEC NLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYVGTDYVLRGFFQIRMFG EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA