| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is blh [H]
Identifier: 220904912
GI number: 220904912
Start: 1981686
End: 1982555
Strand: Direct
Name: blh [H]
Synonym: Ddes_1647
Alternate gene names: 220904912
Gene position: 1981686-1982555 (Clockwise)
Preceding gene: 220904911
Following gene: 220904913
Centisome position: 68.97
GC content: 56.44
Gene sequence:
>870_bases ATGACTGCCCCCAATGTGCGCGGATTTTTTGACCCCGTTACCGCAACCTGGACCTATGTGGTCTGGTCCGGTACAGACAG CCGCCGGCGCTGCGCCATTATCGACAGCGTGCTGGACTATGACATGCCCTCAAGCCGCACCGGCACGGCATCCGCAGATA CGGTTATTACATTTGTACACCGGAAAGAGCTTGAGGTAGAGTGGATACTTGAAACACACATTCATGCGGACCATATTACC GCCGCCCGCTACCTCAAGGAAAGGCTGGGCGGCAAGATAGCCATGAGCAGGCACATGCTGAATATCATCGCCACCTGGGT TCCCGTTTTTCAGACCGGCGACGATACCCCGGCCGATGGAGCAGATTTTGACCATCTTTTTGAAAACGATGAAACATTCA CCATTGGTGACCTCAAGGCCAAAATCATCCATACGCCCGGGCATACCCCGGCCGACACCACCTACATCATCGAAGATGCC GCCTTTGTGGGCGACACCATCTTTCTGCCCGACGTGGGTTCCGGCCGCTGCGATTTCCCGGGCGGCAGCCCCGAGGACTC CTACGAATCTTCGCGCAAACTTTTTGCCCTGCCGGACCATTACCGCATATATGTGGGACACGACTATCCCCCGGCAGGCA AACGCGGCCCCGAGTGCATGAGCACCGTCGGCGAACAAAAGCTGAAAAATGAACGCCTGCACATGGGCATTGATAAAAAC AGCTTCGTCTCGCGCCGTAAGGCAGATGATACGGGCAAGGCCGTGCCGCCTCTGCTGCTGCCCTCCATCCAGGCCAATAT GCGCGCAGGCGACTTTGGCGCACCAACTGGAGGCATTCAGTACGTAAAATTGCCGGTAAACAAGATCTAG
Upstream 100 bases:
>100_bases CGCAGTGCCGGATCAAAGCCCGGCACGCCGGATATTCACGGTTGGGCCAGTTCCAACCCTACAGCGCCGCCAGGCGCAAC CGACGCCCAAGGAGACTATT
Downstream 100 bases:
>100_bases CCGGAATACATACATTTTGCCATGAAGGCCCTGATGCCCGGGCCTTCATGGCATTGTCATTTTATGAAAGCCGTGTCATA TTGTGAGCAATAGCTATTAC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTAPNVRGFFDPVTATWTYVVWSGTDSRRRCAIIDSVLDYDMPSSRTGTASADTVITFVHRKELEVEWILETHIHADHIT AARYLKERLGGKIAMSRHMLNIIATWVPVFQTGDDTPADGADFDHLFENDETFTIGDLKAKIIHTPGHTPADTTYIIEDA AFVGDTIFLPDVGSGRCDFPGGSPEDSYESSRKLFALPDHYRIYVGHDYPPAGKRGPECMSTVGEQKLKNERLHMGIDKN SFVSRRKADDTGKAVPPLLLPSIQANMRAGDFGAPTGGIQYVKLPVNKI
Sequences:
>Translated_289_residues MTAPNVRGFFDPVTATWTYVVWSGTDSRRRCAIIDSVLDYDMPSSRTGTASADTVITFVHRKELEVEWILETHIHADHIT AARYLKERLGGKIAMSRHMLNIIATWVPVFQTGDDTPADGADFDHLFENDETFTIGDLKAKIIHTPGHTPADTTYIIEDA AFVGDTIFLPDVGSGRCDFPGGSPEDSYESSRKLFALPDHYRIYVGHDYPPAGKRGPECMSTVGEQKLKNERLHMGIDKN SFVSRRKADDTGKAVPPLLLPSIQANMRAGDFGAPTGGIQYVKLPVNKI >Mature_288_residues TAPNVRGFFDPVTATWTYVVWSGTDSRRRCAIIDSVLDYDMPSSRTGTASADTVITFVHRKELEVEWILETHIHADHITA ARYLKERLGGKIAMSRHMLNIIATWVPVFQTGDDTPADGADFDHLFENDETFTIGDLKAKIIHTPGHTPADTTYIIEDAA FVGDTIFLPDVGSGRCDFPGGSPEDSYESSRKLFALPDHYRIYVGHDYPPAGKRGPECMSTVGEQKLKNERLHMGIDKNS FVSRRKADDTGKAVPPLLLPSIQANMRAGDFGAPTGGIQYVKLPVNKI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=269, Percent_Identity=28.996282527881, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17538952, Length=273, Percent_Identity=29.6703296703297, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221330176, Length=272, Percent_Identity=29.0441176470588, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24667703, Length=165, Percent_Identity=35.1515151515151, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356335, Length=165, Percent_Identity=35.1515151515151, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24667711, Length=165, Percent_Identity=35.1515151515151, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31953; Mature: 31822
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPNVRGFFDPVTATWTYVVWSGTDSRRRCAIIDSVLDYDMPSSRTGTASADTVITFVH CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE RKELEVEWILETHIHADHITAARYLKERLGGKIAMSRHMLNIIATWVPVFQTGDDTPADG CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHEECCCCCCCCC ADFDHLFENDETFTIGDLKAKIIHTPGHTPADTTYIIEDAAFVGDTIFLPDVGSGRCDFP CCHHHHHCCCCEEEEECEEEEEEECCCCCCCCCEEEEECHHHHCCEEEECCCCCCCCCCC GGSPEDSYESSRKLFALPDHYRIYVGHDYPPAGKRGPECMSTVGEQKLKNERLHMGIDKN CCCCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCH SFVSRRKADDTGKAVPPLLLPSIQANMRAGDFGAPTGGIQYVKLPVNKI HHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TAPNVRGFFDPVTATWTYVVWSGTDSRRRCAIIDSVLDYDMPSSRTGTASADTVITFVH CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE RKELEVEWILETHIHADHITAARYLKERLGGKIAMSRHMLNIIATWVPVFQTGDDTPADG CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHEECCCCCCCCC ADFDHLFENDETFTIGDLKAKIIHTPGHTPADTTYIIEDAAFVGDTIFLPDVGSGRCDFP CCHHHHHCCCCEEEEECEEEEEEECCCCCCCCCEEEEECHHHHCCEEEECCCCCCCCCCC GGSPEDSYESSRKLFALPDHYRIYVGHDYPPAGKRGPECMSTVGEQKLKNERLHMGIDKN CCCCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCH SFVSRRKADDTGKAVPPLLLPSIQANMRAGDFGAPTGGIQYVKLPVNKI HHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]