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The map label for this gene is ygaP [C]

Identifier: 220904911

GI number: 220904911

Start: 1980898

End: 1981527

Strand: Direct

Name: ygaP [C]

Synonym: Ddes_1646

Alternate gene names: 220904911

Gene position: 1980898-1981527 (Clockwise)

Preceding gene: 220904910

Following gene: 220904912

Centisome position: 68.94

GC content: 58.73

Gene sequence:

>630_bases
ATGTCCGCTGTACAAAGCATCAGCGCCAGAGAGCTGCACAGTGTGGACTTGAAGCAGGCTCTTGTTGTGGATGTTCGTTC
CCCCATGGAATATTCTGAAAAACGGCTGGCCATGCCTACAGCCTTTGCCCCTGTGACAGACCTTGATCCCCGTGATGTTG
CCCTGCGCAGCGGCGTACTTGCCGATACACAGCTATTCACCATTTGCCGCAGCGGCGCACGCGCCAAAAGCGCTGCTGAA
AAATTTTTCCGGGCCGGGTATACTAACGTGCGCTTCATTGACGGGGGCATTGCCGCCTGTGAAGAAGCCGGTTTCGCCAC
GGTTGGCGAAGGACTGTCCAAAACTGGAGAAGCATCGCCCTCGCTGGACCGGCAGGTACGCCTGGCAGCAGGAGCGCTTA
CGGTACTCTTCATGCTGCTGGGCTATGGCATCAGCCCGCTGTTTTATCTGGGTGCGCTGTTTATCGGCGCAGGTCAGGTT
TTCTCCGGCATCACCAACTGGTGCGGGATGGCCCTTCTGCTCATGCGCGCTCCCTGGAACCAGAAAGGAGCCTCATGCAC
ACTTGGGGGAGCCTGTTCCATCGGCGGTAACAAGGGCGGCGGCGCAAGCCCCGGTGCAAGCTGCCAGTAA

Upstream 100 bases:

>100_bases
AGGATACCATCACCGCTGCGTCCGGATTGCATTCCGCCTGGCACTGCTCCCGGTTACGTTGCGTGCATTGCGGCAGCTAT
TGCCGGAAAAAGGAGACCCT

Downstream 100 bases:

>100_bases
CCGGCAACAGCCGGGGCATGCCCGGCAAAGGCCTATCCCGGCCAAGACCGACCAATACCGCAGTGCCGGATCAAAGCCCG
GCACGCCGGATATTCACGGT

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSAVQSISARELHSVDLKQALVVDVRSPMEYSEKRLAMPTAFAPVTDLDPRDVALRSGVLADTQLFTICRSGARAKSAAE
KFFRAGYTNVRFIDGGIAACEEAGFATVGEGLSKTGEASPSLDRQVRLAAGALTVLFMLLGYGISPLFYLGALFIGAGQV
FSGITNWCGMALLLMRAPWNQKGASCTLGGACSIGGNKGGGASPGASCQ

Sequences:

>Translated_209_residues
MSAVQSISARELHSVDLKQALVVDVRSPMEYSEKRLAMPTAFAPVTDLDPRDVALRSGVLADTQLFTICRSGARAKSAAE
KFFRAGYTNVRFIDGGIAACEEAGFATVGEGLSKTGEASPSLDRQVRLAAGALTVLFMLLGYGISPLFYLGALFIGAGQV
FSGITNWCGMALLLMRAPWNQKGASCTLGGACSIGGNKGGGASPGASCQ
>Mature_208_residues
SAVQSISARELHSVDLKQALVVDVRSPMEYSEKRLAMPTAFAPVTDLDPRDVALRSGVLADTQLFTICRSGARAKSAAEK
FFRAGYTNVRFIDGGIAACEEAGFATVGEGLSKTGEASPSLDRQVRLAAGALTVLFMLLGYGISPLFYLGALFIGAGQVF
SGITNWCGMALLLMRAPWNQKGASCTLGGACSIGGNKGGGASPGASCQ

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=185, Percent_Identity=31.3513513513514, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 21720; Mature: 21589

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVQSISARELHSVDLKQALVVDVRSPMEYSEKRLAMPTAFAPVTDLDPRDVALRSGVL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
ADTQLFTICRSGARAKSAAEKFFRAGYTNVRFIDGGIAACEEAGFATVGEGLSKTGEASP
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHHHHHHCCCCCC
SLDRQVRLAAGALTVLFMLLGYGISPLFYLGALFIGAGQVFSGITNWCGMALLLMRAPWN
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QKGASCTLGGACSIGGNKGGGASPGASCQ
CCCCCEECCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAVQSISARELHSVDLKQALVVDVRSPMEYSEKRLAMPTAFAPVTDLDPRDVALRSGVL
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
ADTQLFTICRSGARAKSAAEKFFRAGYTNVRFIDGGIAACEEAGFATVGEGLSKTGEASP
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHHHHHHCCCCCC
SLDRQVRLAAGALTVLFMLLGYGISPLFYLGALFIGAGQVFSGITNWCGMALLLMRAPWN
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QKGASCTLGGACSIGGNKGGGASPGASCQ
CCCCCEECCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]