| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904466
Identifier: 220904466
GI number: 220904466
Start: 1407314
End: 1408771
Strand: Direct
Name: 220904466
Synonym: Ddes_1196
Alternate gene names: NA
Gene position: 1407314-1408771 (Clockwise)
Preceding gene: 220904465
Following gene: 220904467
Centisome position: 48.98
GC content: 58.02
Gene sequence:
>1458_bases GTGTTCAAATCATATCTGCGGACCACACTCATGCTGGCAGCTGCCGCTCTTCTTGTTGCAGGTTGCAGTTCATACCAGCC AACCAAAAACGCATGGAAGTCCACCAAAGGATTCTGGAATACGTACGTTAGTCCACCTGCCTCGGTGGATTATGACGAAA AAGGTGAACTTTCGCCGCAGGCTTTGGCCCTGACCCATAGCATGATGGGTATTGATGTGGAGCTGAGCCGCCTTGAGCGC GTCATGCTTAACGCCGACAAGCCGCCCACGCGTGACTGGATCGTCACGTTCTTCAACAGCTTCCCTTGGGTCAGCGGCTT TGCGGGCGTCAAGTATGACGGCAGCATTCTTGGTCAGGAGCCTGCTAACCCCATGAAGCAGCTTGATTTTATCCCTCTGC TTTATGAAGATAAAAAACAGAGCAGCCGCGCCTTGCGGGCCGATGTGCAACCTTCTCCTTTGGGGCCGGAGGTTTTGCTG GCCGCTCCGCTGTATGACGGCGTAGACTTTTTGGGTGTGGTGGCAACCTATTTTGACATGCGTGCGCTCATGCAGTATTC CGGTAGCCCGGAAAACGTGGTCATTCTTACTCCCCAGGCCCTGTTGTGGCCTGGCAAGTATGATTTTGCGGCCACGCCTT TGGCTGGTGTAAATTGGGATGAAGCCGTTACCAAGAGTTCTTCCGGCACATGCACCAATGTAAACGGCACGTTTTATTAT CTTGTTCGCTACCTGGGCAACCTGCCCCTTGTTTTTGCCGTTGCTGAAAAAGGCACCTTCCCTGAAGGCGGCGGCAATGT GGATCAGGGGCTGGCGTTTTTCCCGAAAGAACGGGAAAAGTTGCCGCCGCCCCCCCAACCAGAACGCAAGCGCAAAAATC TGGACGGTCCGGCCATGGCTGTGCCGGCGCCCGGCGATGCTGTCACCGCCGAAGGCGAAGCACCGCGGCCTGCAGGCGCC CCCTCTCACGACCTTCAGCCCGGCAGCCACGACAGTGTGTTGCTCAAGAACAAGCGTGCCGAGAAGGGCAGGGTTCAGGA GCGTCAGCTTGAGGGAGAAAATGTTCCTGTAGAAAGGGTGCAGCGGCCACGCCGTGCGGCTCCCGCTTCGCCGCCTGCCG GTCTTGGCTTGCCGGCAGATATGGATGCCGGCAGACCGAGTCCCTTTGGCCCCCGCGAAGAAAGGCCCACGGTAGTTATG CCGAGTCCCTTCGGCCCTCGTGCGGATGAGACAGAGGAAGGCAAGGCCGGAACTGCCACTGAAGGAGCTGGCAAGGAAAA TGCTGCTCCTGTGGACGAAGCCGCCAAGGCTCCAGCACCCGCCGCGGAAAAACCGGCTGAAAAGCCTGCACCGGAAAAAA CTGGCGCTGCATCTTCAGCTGACGATGAACCGGACAGCAACGCCGCTCCGGCCATTTTGCCGGGTGGGCGTCCAAGTCCT TTCGGGCCACGGAATTGA
Upstream 100 bases:
>100_bases GTGCTGACAGGCTCTGTGTCAATGCCTGACGGCGCTTTACCATTCGTGCGGAGTTGTCCGGCAATAATGCATGGCTGCTC TAAAGCTCAGGGAGAACACG
Downstream 100 bases:
>100_bases CGCATATTATGAAGCTTGCGCCGCCCCGGGGCGGCGCAAGCCTTTAGGTATTCGGAACATCTGTTTTTTGCAGGAGGCCT GCATGGCTGATATCACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MFKSYLRTTLMLAAAALLVAGCSSYQPTKNAWKSTKGFWNTYVSPPASVDYDEKGELSPQALALTHSMMGIDVELSRLER VMLNADKPPTRDWIVTFFNSFPWVSGFAGVKYDGSILGQEPANPMKQLDFIPLLYEDKKQSSRALRADVQPSPLGPEVLL AAPLYDGVDFLGVVATYFDMRALMQYSGSPENVVILTPQALLWPGKYDFAATPLAGVNWDEAVTKSSSGTCTNVNGTFYY LVRYLGNLPLVFAVAEKGTFPEGGGNVDQGLAFFPKEREKLPPPPQPERKRKNLDGPAMAVPAPGDAVTAEGEAPRPAGA PSHDLQPGSHDSVLLKNKRAEKGRVQERQLEGENVPVERVQRPRRAAPASPPAGLGLPADMDAGRPSPFGPREERPTVVM PSPFGPRADETEEGKAGTATEGAGKENAAPVDEAAKAPAPAAEKPAEKPAPEKTGAASSADDEPDSNAAPAILPGGRPSP FGPRN
Sequences:
>Translated_485_residues MFKSYLRTTLMLAAAALLVAGCSSYQPTKNAWKSTKGFWNTYVSPPASVDYDEKGELSPQALALTHSMMGIDVELSRLER VMLNADKPPTRDWIVTFFNSFPWVSGFAGVKYDGSILGQEPANPMKQLDFIPLLYEDKKQSSRALRADVQPSPLGPEVLL AAPLYDGVDFLGVVATYFDMRALMQYSGSPENVVILTPQALLWPGKYDFAATPLAGVNWDEAVTKSSSGTCTNVNGTFYY LVRYLGNLPLVFAVAEKGTFPEGGGNVDQGLAFFPKEREKLPPPPQPERKRKNLDGPAMAVPAPGDAVTAEGEAPRPAGA PSHDLQPGSHDSVLLKNKRAEKGRVQERQLEGENVPVERVQRPRRAAPASPPAGLGLPADMDAGRPSPFGPREERPTVVM PSPFGPRADETEEGKAGTATEGAGKENAAPVDEAAKAPAPAAEKPAEKPAPEKTGAASSADDEPDSNAAPAILPGGRPSP FGPRN >Mature_485_residues MFKSYLRTTLMLAAAALLVAGCSSYQPTKNAWKSTKGFWNTYVSPPASVDYDEKGELSPQALALTHSMMGIDVELSRLER VMLNADKPPTRDWIVTFFNSFPWVSGFAGVKYDGSILGQEPANPMKQLDFIPLLYEDKKQSSRALRADVQPSPLGPEVLL AAPLYDGVDFLGVVATYFDMRALMQYSGSPENVVILTPQALLWPGKYDFAATPLAGVNWDEAVTKSSSGTCTNVNGTFYY LVRYLGNLPLVFAVAEKGTFPEGGGNVDQGLAFFPKEREKLPPPPQPERKRKNLDGPAMAVPAPGDAVTAEGEAPRPAGA PSHDLQPGSHDSVLLKNKRAEKGRVQERQLEGENVPVERVQRPRRAAPASPPAGLGLPADMDAGRPSPFGPREERPTVVM PSPFGPRADETEEGKAGTATEGAGKENAAPVDEAAKAPAPAAEKPAEKPAPEKTGAASSADDEPDSNAAPAILPGGRPSP FGPRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51770; Mature: 51770
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSYLRTTLMLAAAALLVAGCSSYQPTKNAWKSTKGFWNTYVSPPASVDYDEKGELSPQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHH ALALTHSMMGIDVELSRLERVMLNADKPPTRDWIVTFFNSFPWVSGFAGVKYDGSILGQE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PANPMKQLDFIPLLYEDKKQSSRALRADVQPSPLGPEVLLAAPLYDGVDFLGVVATYFDM CCCHHHHHCCCCEEECCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH RALMQYSGSPENVVILTPQALLWPGKYDFAATPLAGVNWDEAVTKSSSGTCTNVNGTFYY HHHHHHCCCCCCEEEECCHHEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCHHHH LVRYLGNLPLVFAVAEKGTFPEGGGNVDQGLAFFPKEREKLPPPPQPERKRKNLDGPAMA HHHHHCCCCEEEEEECCCCCCCCCCCHHCCCEECCCHHHCCCCCCCHHHHHCCCCCCEEE VPAPGDAVTAEGEAPRPAGAPSHDLQPGSHDSVLLKNKRAEKGRVQERQLEGENVPVERV ECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHCCHHHHHHCCCCCCHHHH QRPRRAAPASPPAGLGLPADMDAGRPSPFGPREERPTVVMPSPFGPRADETEEGKAGTAT HCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC EGAGKENAAPVDEAAKAPAPAAEKPAEKPAPEKTGAASSADDEPDSNAAPAILPGGRPSP CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC FGPRN CCCCC >Mature Secondary Structure MFKSYLRTTLMLAAAALLVAGCSSYQPTKNAWKSTKGFWNTYVSPPASVDYDEKGELSPQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHH ALALTHSMMGIDVELSRLERVMLNADKPPTRDWIVTFFNSFPWVSGFAGVKYDGSILGQE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PANPMKQLDFIPLLYEDKKQSSRALRADVQPSPLGPEVLLAAPLYDGVDFLGVVATYFDM CCCHHHHHCCCCEEECCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH RALMQYSGSPENVVILTPQALLWPGKYDFAATPLAGVNWDEAVTKSSSGTCTNVNGTFYY HHHHHHCCCCCCEEEECCHHEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCHHHH LVRYLGNLPLVFAVAEKGTFPEGGGNVDQGLAFFPKEREKLPPPPQPERKRKNLDGPAMA HHHHHCCCCEEEEEECCCCCCCCCCCHHCCCEECCCHHHCCCCCCCHHHHHCCCCCCEEE VPAPGDAVTAEGEAPRPAGAPSHDLQPGSHDSVLLKNKRAEKGRVQERQLEGENVPVERV ECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHCCHHHHHHCCCCCCHHHH QRPRRAAPASPPAGLGLPADMDAGRPSPFGPREERPTVVMPSPFGPRADETEEGKAGTAT HCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC EGAGKENAAPVDEAAKAPAPAAEKPAEKPAPEKTGAASSADDEPDSNAAPAILPGGRPSP CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC FGPRN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA