| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is wecB [H]
Identifier: 220904288
GI number: 220904288
Start: 1188433
End: 1189551
Strand: Direct
Name: wecB [H]
Synonym: Ddes_1015
Alternate gene names: 220904288
Gene position: 1188433-1189551 (Clockwise)
Preceding gene: 220904287
Following gene: 220904289
Centisome position: 41.36
GC content: 55.05
Gene sequence:
>1119_bases ATGAAAAAGGTACTTGTTATCGCCGGTACGCGCCCCGAAGCCGTCAAGCTGGCACCGCTGGTACACGAACTGCGCCGCAG GCCGGATGATTTTACGGTTCACCTGTGCTCCAGTGGTCAGCATCAGACCATGCTGGAGCAAACACTGGCCGATTTTGATC TCAAGCCGGATTCTTCGCTCCAGGTCATGACAGGCAATCAAAGTCTTGCGGGGCTTAGTGCTCGCCTTTTTTCTGAGGTG GACGGCCTGCTTGACAGGCTCGCTCCTGATGTGGTGCTTGTGCAGGGCGATACAACGACAGTTCAGGTTTCGGCTCTGAG CGCGTTTTACAGGCATATTCCTGTTGGACATGTGGAGGCAGGTTTGCGTACCTGGAACCTGAACTCTCCTTTTCCTGAAG AGTTGAACCGTCGCGTGGTTGCTCTTGCAGTGCGCTGGCACTACGCGCCCACGGAACTTGCCAGACAAAACTTGCTGGCA GAGCGCATCAGGCCGGAAAGCGTCATCGTTACGGGCAATACCGTTATTGATGCGCTGCACATGACGCTTGCCGCTTCCCG CCGTCATCCGCCGGCTCTGCCGCCTCGTGTTGAGGCTGTTCTGGCGCAAAAAAATCCGGTTATTCTGGTTACAGGTCACC GGAGGGAAAGTTTTGGTGAAGGTTTTCGGCGTATTTGCGCGGCCCTGAAAAATATTGCCCTCGCCCTGCCTCATATGTGG ATCGTCTTTCCCGTGCATCTGAATCCGCATGTTCATGGCCCGGTTACTGAAATGTTGGGTGGCGTCCCCAATATTTTACT GGAAGCGCCGCTGCCCTATACGGCGTTTGTGCGCCTGATGGATGCCTGCACACTGATTCTTACAGACTCCGGTGGGATAC AGGAAGAAGGCCCGTCACTGAGCAAGCCTGTTCTCATCATGAGAGACACCACCGAGCGGCCCGAAGGCGTGGAGGCCGGA GTCAACAGGCTGGTGGGAACGGACTCGCAACGCATTTTTGATGAAGTGCTCGGTCTTGTGGGTAATCCATCACACATTGC TGCAATGCAAAACGCTGTAAACCCCTATGGTGATGGCAAGGCGGCAAAACGTATCGCCGACCACCTGAAAATGCAATAA
Upstream 100 bases:
>100_bases TTGTTGAAAGCATTGCGGCTAACCTGCCCTATGAAAACCGCCGGGACGGCCTGTTTTTCGGGTTGTCTGCTGTCCGCACA AAGGCATAGTGGTTACGCCT
Downstream 100 bases:
>100_bases TATATTTTGTTAATACATTGCTGTGTGTATTGCGTTGTGCATAAGAGCGGAGGTTTTATATGCCGGCTTCTCCAACTGAC ATGATTCTGAAAAAACTCCA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKKVLVIAGTRPEAVKLAPLVHELRRRPDDFTVHLCSSGQHQTMLEQTLADFDLKPDSSLQVMTGNQSLAGLSARLFSEV DGLLDRLAPDVVLVQGDTTTVQVSALSAFYRHIPVGHVEAGLRTWNLNSPFPEELNRRVVALAVRWHYAPTELARQNLLA ERIRPESVIVTGNTVIDALHMTLAASRRHPPALPPRVEAVLAQKNPVILVTGHRRESFGEGFRRICAALKNIALALPHMW IVFPVHLNPHVHGPVTEMLGGVPNILLEAPLPYTAFVRLMDACTLILTDSGGIQEEGPSLSKPVLIMRDTTERPEGVEAG VNRLVGTDSQRIFDEVLGLVGNPSHIAAMQNAVNPYGDGKAAKRIADHLKMQ
Sequences:
>Translated_372_residues MKKVLVIAGTRPEAVKLAPLVHELRRRPDDFTVHLCSSGQHQTMLEQTLADFDLKPDSSLQVMTGNQSLAGLSARLFSEV DGLLDRLAPDVVLVQGDTTTVQVSALSAFYRHIPVGHVEAGLRTWNLNSPFPEELNRRVVALAVRWHYAPTELARQNLLA ERIRPESVIVTGNTVIDALHMTLAASRRHPPALPPRVEAVLAQKNPVILVTGHRRESFGEGFRRICAALKNIALALPHMW IVFPVHLNPHVHGPVTEMLGGVPNILLEAPLPYTAFVRLMDACTLILTDSGGIQEEGPSLSKPVLIMRDTTERPEGVEAG VNRLVGTDSQRIFDEVLGLVGNPSHIAAMQNAVNPYGDGKAAKRIADHLKMQ >Mature_372_residues MKKVLVIAGTRPEAVKLAPLVHELRRRPDDFTVHLCSSGQHQTMLEQTLADFDLKPDSSLQVMTGNQSLAGLSARLFSEV DGLLDRLAPDVVLVQGDTTTVQVSALSAFYRHIPVGHVEAGLRTWNLNSPFPEELNRRVVALAVRWHYAPTELARQNLLA ERIRPESVIVTGNTVIDALHMTLAASRRHPPALPPRVEAVLAQKNPVILVTGHRRESFGEGFRRICAALKNIALALPHMW IVFPVHLNPHVHGPVTEMLGGVPNILLEAPLPYTAFVRLMDACTLILTDSGGIQEEGPSLSKPVLIMRDTTERPEGVEAG VNRLVGTDSQRIFDEVLGLVGNPSHIAAMQNAVNPYGDGKAAKRIADHLKMQ
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=375, Percent_Identity=50.9333333333333, Blast_Score=343, Evalue=1e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 40721; Mature: 40721
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLVIAGTRPEAVKLAPLVHELRRRPDDFTVHLCSSGQHQTMLEQTLADFDLKPDSSL CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCE QVMTGNQSLAGLSARLFSEVDGLLDRLAPDVVLVQGDTTTVQVSALSAFYRHIPVGHVEA EEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHC GLRTWNLNSPFPEELNRRVVALAVRWHYAPTELARQNLLAERIRPESVIVTGNTVIDALH CCEEECCCCCCHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH MTLAASRRHPPALPPRVEAVLAQKNPVILVTGHRRESFGEGFRRICAALKNIALALPHMW HHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE IVFPVHLNPHVHGPVTEMLGGVPNILLEAPLPYTAFVRLMDACTLILTDSGGIQEEGPSL EEEEEEECCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCC SKPVLIMRDTTERPEGVEAGVNRLVGTDSQRIFDEVLGLVGNPSHIAAMQNAVNPYGDGK CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH AAKRIADHLKMQ HHHHHHHHHCCC >Mature Secondary Structure MKKVLVIAGTRPEAVKLAPLVHELRRRPDDFTVHLCSSGQHQTMLEQTLADFDLKPDSSL CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCE QVMTGNQSLAGLSARLFSEVDGLLDRLAPDVVLVQGDTTTVQVSALSAFYRHIPVGHVEA EEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHC GLRTWNLNSPFPEELNRRVVALAVRWHYAPTELARQNLLAERIRPESVIVTGNTVIDALH CCEEECCCCCCHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH MTLAASRRHPPALPPRVEAVLAQKNPVILVTGHRRESFGEGFRRICAALKNIALALPHMW HHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE IVFPVHLNPHVHGPVTEMLGGVPNILLEAPLPYTAFVRLMDACTLILTDSGGIQEEGPSL EEEEEEECCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCC SKPVLIMRDTTERPEGVEAGVNRLVGTDSQRIFDEVLGLVGNPSHIAAMQNAVNPYGDGK CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH AAKRIADHLKMQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]