| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is pyrR [H]
Identifier: 220904179
GI number: 220904179
Start: 1055789
End: 1056328
Strand: Reverse
Name: pyrR [H]
Synonym: Ddes_0906
Alternate gene names: 220904179
Gene position: 1056328-1055789 (Counterclockwise)
Preceding gene: 220904192
Following gene: 220904178
Centisome position: 36.76
GC content: 63.89
Gene sequence:
>540_bases ATGGCTACAACCCTGCTGCTTGAAGAACATGAAATGACCCGCATGCTGGAGCGCCTGGCGTCCCAGATTATGGAACGCCA CGCAGACTGCGGGCATGTCATGCTTGTAGGCATCGAGCGGCGCGGCGCGGACCTTGCCCACCGCTTGGCAGGCCTGCTGC AGGAGCGCCTCGGTCACCCGGTGCTGCTGGGTACGCTGGATATCAATCTTTACCGTGACGACTGGACAAGCCTTGAGGCC CAGCCGCATATCGGCCAGTCGCGCATACCCGCAAGCGTGGACGGGCGCGTGATCGTTCTTGTGGATGACGTGCTCTATAC GGGCCGAACCATCCGCGCCGCCCTTGAGGCCCTGCTGGACTATGGCCGCCCCAGGGCTGTGGAACTGCTGGCCCTTATAG ACCGGGGTCATCGCGAACTGCCCATACATGCCGACTATGTGGGCCGCACGGTCAACACCAGCCGCCAGGAGCGCGTGGAC GTGCTGCTCACCGAAAGGGACGGGCAGGACGCGGTTCACCTTACAGCCAGCCCCGCCTGA
Upstream 100 bases:
>100_bases GTAACTAAGGCCATGCACCGGGCTTGTCAATTACCGGGGGACTTTTCTTCAGCCACAAAAAGCGTTAACCTGCTTTCAGC GAGACGTTACGGGAGGAAAG
Downstream 100 bases:
>100_bases TTTCAGGGGCAACCTGCCGGGACCGGATTTGCCTGAAGCATCTCCCGGCTGTAACCCTGCCGGGCGGCCACGCCGCCCCT GCCCACGGCCCAGGGCCGTG
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MATTLLLEEHEMTRMLERLASQIMERHADCGHVMLVGIERRGADLAHRLAGLLQERLGHPVLLGTLDINLYRDDWTSLEA QPHIGQSRIPASVDGRVIVLVDDVLYTGRTIRAALEALLDYGRPRAVELLALIDRGHRELPIHADYVGRTVNTSRQERVD VLLTERDGQDAVHLTASPA
Sequences:
>Translated_179_residues MATTLLLEEHEMTRMLERLASQIMERHADCGHVMLVGIERRGADLAHRLAGLLQERLGHPVLLGTLDINLYRDDWTSLEA QPHIGQSRIPASVDGRVIVLVDDVLYTGRTIRAALEALLDYGRPRAVELLALIDRGHRELPIHADYVGRTVNTSRQERVD VLLTERDGQDAVHLTASPA >Mature_178_residues ATTLLLEEHEMTRMLERLASQIMERHADCGHVMLVGIERRGADLAHRLAGLLQERLGHPVLLGTLDINLYRDDWTSLEAQ PHIGQSRIPASVDGRVIVLVDDVLYTGRTIRAALEALLDYGRPRAVELLALIDRGHRELPIHADYVGRTVNTSRQERVDV LLTERDGQDAVHLTASPA
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 20003; Mature: 19872
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLLLEEHEMTRMLERLASQIMERHADCGHVMLVGIERRGADLAHRLAGLLQERLGHP CCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC VLLGTLDINLYRDDWTSLEAQPHIGQSRIPASVDGRVIVLVDDVLYTGRTIRAALEALLD EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHH YGRPRAVELLALIDRGHRELPIHADYVGRTVNTSRQERVDVLLTERDGQDAVHLTASPA CCCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCCHHHEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure ATTLLLEEHEMTRMLERLASQIMERHADCGHVMLVGIERRGADLAHRLAGLLQERLGHP CCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC VLLGTLDINLYRDDWTSLEAQPHIGQSRIPASVDGRVIVLVDDVLYTGRTIRAALEALLD EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHH YGRPRAVELLALIDRGHRELPIHADYVGRTVNTSRQERVDVLLTERDGQDAVHLTASPA CCCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCCHHHEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA