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The map label for this gene is ychJ [C]

Identifier: 220904122

GI number: 220904122

Start: 994486

End: 994998

Strand: Direct

Name: ychJ [C]

Synonym: Ddes_0849

Alternate gene names: 220904122

Gene position: 994486-994998 (Clockwise)

Preceding gene: 220904117

Following gene: 220904123

Centisome position: 34.61

GC content: 57.12

Gene sequence:

>513_bases
ATGCAACAGCAATGCCCTTGCGGCAGCGGCCATTCTCTTGATCAGTGCTGCGGTCCTTATATGGATGGCACGGCATGGCC
CGGCGATGCCGAAACTCTTATGCGTTCGCGCTATTCGGCCTACGTGCTTGGCCGTTACCAGTGGCTTGTCGACAGCACTC
ACCCGGATTACCGGGAGGGTATTTCTGTGGAAAAGCTTACGGAACAGGCCAGGGACGTACAGTGGCTGCGTCTGGATGTG
GGGCGGACTGAAAGCGACGTGCCGGCCGGACAAAACGGTGAACTGTTTGATGTGGTGGAGTTTCATGCCTACTATGAAAT
GGAGGGCATCCCCCGCCAGCTGGGCGAGCGCAGCTTTTTTGCCCGCCACGATGAAAAGATCTTTTATGTGGATGGTGTTG
CCCTGAGGCCCGAGGCGTACCGCAGGCAAAATCCCAAGGTGGGGCGCAACGATCCCTGTCCTTGCGGCAGCGGCAAAAAG
TACAAAAAATGCTGTGGAGCCGAAACCGCTTGA

Upstream 100 bases:

>100_bases
GGCGCAGCAGGCCCTTGTACGCTCTTGCCGCCCGGACTGGCATGCGTTAATATTTATGGGTTATACGCCCCCTGAGGGCT
TTAAAAACAAGGTGGATTTC

Downstream 100 bases:

>100_bases
GCGCCCCCACCATAGATCGCGCTGCACGGGGAGCCGGAAAAACCGGCCCCCTCACGGCCATCCGCCAGTTTTGCCTTGAA
TGCCAGGGGGCTTCCGGCAA

Product: SEC-C motif domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQQQCPCGSGHSLDQCCGPYMDGTAWPGDAETLMRSRYSAYVLGRYQWLVDSTHPDYREGISVEKLTEQARDVQWLRLDV
GRTESDVPAGQNGELFDVVEFHAYYEMEGIPRQLGERSFFARHDEKIFYVDGVALRPEAYRRQNPKVGRNDPCPCGSGKK
YKKCCGAETA

Sequences:

>Translated_170_residues
MQQQCPCGSGHSLDQCCGPYMDGTAWPGDAETLMRSRYSAYVLGRYQWLVDSTHPDYREGISVEKLTEQARDVQWLRLDV
GRTESDVPAGQNGELFDVVEFHAYYEMEGIPRQLGERSFFARHDEKIFYVDGVALRPEAYRRQNPKVGRNDPCPCGSGKK
YKKCCGAETA
>Mature_170_residues
MQQQCPCGSGHSLDQCCGPYMDGTAWPGDAETLMRSRYSAYVLGRYQWLVDSTHPDYREGISVEKLTEQARDVQWLRLDV
GRTESDVPAGQNGELFDVVEFHAYYEMEGIPRQLGERSFFARHDEKIFYVDGVALRPEAYRRQNPKVGRNDPCPCGSGKK
YKKCCGAETA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=166, Percent_Identity=36.7469879518072, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 19285; Mature: 19285

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQCPCGSGHSLDQCCGPYMDGTAWPGDAETLMRSRYSAYVLGRYQWLVDSTHPDYREG
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEHEEEEECCCCCHHHHC
ISVEKLTEQARDVQWLRLDVGRTESDVPAGQNGELFDVVEFHAYYEMEGIPRQLGERSFF
CCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHCCHHHH
ARHDEKIFYVDGVALRPEAYRRQNPKVGRNDPCPCGSGKKYKKCCGAETA
HCCCCEEEEECCEEECCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MQQQCPCGSGHSLDQCCGPYMDGTAWPGDAETLMRSRYSAYVLGRYQWLVDSTHPDYREG
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEHEEEEECCCCCHHHHC
ISVEKLTEQARDVQWLRLDVGRTESDVPAGQNGELFDVVEFHAYYEMEGIPRQLGERSFF
CCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHCCHHHH
ARHDEKIFYVDGVALRPEAYRRQNPKVGRNDPCPCGSGKKYKKCCGAETA
HCCCCEEEEECCEEECCHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA