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The map label for this gene is 220904113

Identifier: 220904113

GI number: 220904113

Start: 985228

End: 986829

Strand: Reverse

Name: 220904113

Synonym: Ddes_0839

Alternate gene names: NA

Gene position: 986829-985228 (Counterclockwise)

Preceding gene: 220904114

Following gene: 220904112

Centisome position: 34.34

GC content: 56.24

Gene sequence:

>1602_bases
ATGAAAGACAACCTTCGCTTGACTGACGTTTCCACCGTCGACGGGCAGATGGTCAGCATTGACCTGAAAGAAATCCCCGA
ACTGGCTGTGGATATGCATACCATGCCCTGGAAGCCCTTTACTGAAGAGCAGAAAGAAAACACAGCCTGTATTCTTGACG
AAGTTTGCGTGCTGAACATTCCCAAGCCCAAAAACCGTGAAGAAGAGGAAGAACTGGTCAACAAGTTCCTCGACGGCGTG
CGCAAACTGTTCAGCAAGGAAAATAACTGGACCTTCCTGCCCATGCTTGAAACCAGCATGGACAACTGCGTGCAGTGCAA
CTCCTGTTCTGATGCCTGCCATCTCTACGAGATGTCGGGCGAAAACGAAATGTACCGCCCCAACTTCCGTTCTGAAATCT
TCCGCCGCATCTACAAGCAGTATGTAAAAAAAGAGCCTCTGGCAAAATGGCGCTACGGCGACATGAACCTGAACTGGAAA
ACCGTGGCCCGCCTGGGCGAACTGGCCTACCGCTGCAACCTTTGCCGCCGCTGCGCCCAGACCTGCCCCATCGGTGTGGA
CAATGGCCTGATGGCCCGCGAAATCCGCAAGGTCTTCAGCCAGGAATTGGGCATATATCCCCGCGAACTGCACGAGCGCG
GAACCATGAACCACATGAAGGCCGGCTCTTCCACGGGCATGACGCCCGAAGTGGTAAAAGAAAACGTGGAGTTCATTGAC
GAGGACTACGCGGAAATCACCGGCGTGGGCATTCATACGCCCTTTGACGTGCAGGGCGCGGATATCATGCTGCTGCACAA
TGCCGGCGAAATCATGGCCTGGCCTGAAAACATCGCGTCCTTCTCGCTCATCTTCCAGGAAGCCGGCCTGTCGTGGACGC
TTTCCAGCAAGGCCCTTGCCTATGACGGCGTGAACTACGGCGTGTTTTACGACGATGCCCAGACCGCCCGCATCGCCCTG
CAGCACATGATGGCCGCCAAGGAGCTGGGCGTCAAAAAAATCGTCATCGGCGAATGCGGCCATGCCCACAAGGCGCTCAC
CGTCATCGCCGACCGTGTAATCCCCTTTGAATATCAGGTCCCGCGGGAAAGCTGTTATGTTACCCTGCGCGACATCGTCA
TGAGCGGCCGCCTCAAGCTGGACCCCTCGCGCAACGACTTCCCCGTGACCCTGCACGACCCCTGCAACGTGGTGCGCCTT
ATGGGCATTGTGGAGCCTCAGCGTGAAATCCTGCGTAAAATTGCGCCCCAGTTCCGCGAAATGCCCTGCCACGGCGTAGA
CAACTACTGCTGCGGCGGCGGTTCCGGCTTTGCCATCATGACCCGCAACAACATCGAACAATGGCGCGGCAACATCTCCG
GCCGCAAAAAGATGTGGCAGATCAGCGAAGCCTTCAAGGATTGCCTTGGCCCCGAAACCCGCAAATACATCTGCGCCCCC
TGCTCCAACTGCAAGGGCCAGATCCGCGAAATTCTTGAGCACAACGACCTGTACACCAAGAACAACTTCGCCTACGGCGG
CCTGGTGGAACTTATCGTTAACGCCATGACCAATGTGAATCCCGGCTTCATTGAATTTGAAGGCGCAGGCGAAGAAGAAT
AG

Upstream 100 bases:

>100_bases
GGTCGGCCAAGCATATCTCCGGTGATGGAACCCCCAGGACCTGGGTGGATGTTGCCACCACCAACCCCACAGAAAAGAAA
GAAGACTAGGGAGTTCAGAC

Downstream 100 bases:

>100_bases
CCTTATGGATCCTCGCGGACGCGGCCTCGCCGCGTCCGCTGCGGTTGAGGGACGGCCGTCGCACTGGGGCAGTTTACCCT
TTATTTTGCCTTGGCGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: HMC operon ORF 6 [H]

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MKDNLRLTDVSTVDGQMVSIDLKEIPELAVDMHTMPWKPFTEEQKENTACILDEVCVLNIPKPKNREEEEELVNKFLDGV
RKLFSKENNWTFLPMLETSMDNCVQCNSCSDACHLYEMSGENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNWK
TVARLGELAYRCNLCRRCAQTCPIGVDNGLMAREIRKVFSQELGIYPRELHERGTMNHMKAGSSTGMTPEVVKENVEFID
EDYAEITGVGIHTPFDVQGADIMLLHNAGEIMAWPENIASFSLIFQEAGLSWTLSSKALAYDGVNYGVFYDDAQTARIAL
QHMMAAKELGVKKIVIGECGHAHKALTVIADRVIPFEYQVPRESCYVTLRDIVMSGRLKLDPSRNDFPVTLHDPCNVVRL
MGIVEPQREILRKIAPQFREMPCHGVDNYCCGGGSGFAIMTRNNIEQWRGNISGRKKMWQISEAFKDCLGPETRKYICAP
CSNCKGQIREILEHNDLYTKNNFAYGGLVELIVNAMTNVNPGFIEFEGAGEEE

Sequences:

>Translated_533_residues
MKDNLRLTDVSTVDGQMVSIDLKEIPELAVDMHTMPWKPFTEEQKENTACILDEVCVLNIPKPKNREEEEELVNKFLDGV
RKLFSKENNWTFLPMLETSMDNCVQCNSCSDACHLYEMSGENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNWK
TVARLGELAYRCNLCRRCAQTCPIGVDNGLMAREIRKVFSQELGIYPRELHERGTMNHMKAGSSTGMTPEVVKENVEFID
EDYAEITGVGIHTPFDVQGADIMLLHNAGEIMAWPENIASFSLIFQEAGLSWTLSSKALAYDGVNYGVFYDDAQTARIAL
QHMMAAKELGVKKIVIGECGHAHKALTVIADRVIPFEYQVPRESCYVTLRDIVMSGRLKLDPSRNDFPVTLHDPCNVVRL
MGIVEPQREILRKIAPQFREMPCHGVDNYCCGGGSGFAIMTRNNIEQWRGNISGRKKMWQISEAFKDCLGPETRKYICAP
CSNCKGQIREILEHNDLYTKNNFAYGGLVELIVNAMTNVNPGFIEFEGAGEEE
>Mature_533_residues
MKDNLRLTDVSTVDGQMVSIDLKEIPELAVDMHTMPWKPFTEEQKENTACILDEVCVLNIPKPKNREEEEELVNKFLDGV
RKLFSKENNWTFLPMLETSMDNCVQCNSCSDACHLYEMSGENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNWK
TVARLGELAYRCNLCRRCAQTCPIGVDNGLMAREIRKVFSQELGIYPRELHERGTMNHMKAGSSTGMTPEVVKENVEFID
EDYAEITGVGIHTPFDVQGADIMLLHNAGEIMAWPENIASFSLIFQEAGLSWTLSSKALAYDGVNYGVFYDDAQTARIAL
QHMMAAKELGVKKIVIGECGHAHKALTVIADRVIPFEYQVPRESCYVTLRDIVMSGRLKLDPSRNDFPVTLHDPCNVVRL
MGIVEPQREILRKIAPQFREMPCHGVDNYCCGGGSGFAIMTRNNIEQWRGNISGRKKMWQISEAFKDCLGPETRKYICAP
CSNCKGQIREILEHNDLYTKNNFAYGGLVELIVNAMTNVNPGFIEFEGAGEEE

Specific function: HMWC (high-molecular-weight cytochrome c precursor), ORF2, ORF3, ORF4, ORF5, ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfa

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 60661; Mature: 60661

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNLRLTDVSTVDGQMVSIDLKEIPELAVDMHTMPWKPFTEEQKENTACILDEVCVLNI
CCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCHHEEEC
PKPKNREEEEELVNKFLDGVRKLFSKENNWTFLPMLETSMDNCVQCNSCSDACHLYEMSG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCEECCCCCCHHEEEEECC
ENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNWKTVARLGELAYRCNLCRRCAQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TCPIGVDNGLMAREIRKVFSQELGIYPRELHERGTMNHMKAGSSTGMTPEVVKENVEFID
HCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHH
EDYAEITGVGIHTPFDVQGADIMLLHNAGEIMAWPENIASFSLIFQEAGLSWTLSSKALA
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHCCCEEEECCCEEE
YDGVNYGVFYDDAQTARIALQHMMAAKELGVKKIVIGECGHAHKALTVIADRVIPFEYQV
ECCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEC
PRESCYVTLRDIVMSGRLKLDPSRNDFPVTLHDPCNVVRLMGIVEPQREILRKIAPQFRE
CHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHC
MPCHGVDNYCCGGGSGFAIMTRNNIEQWRGNISGRKKMWQISEAFKDCLGPETRKYICAP
CCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECC
CSNCKGQIREILEHNDLYTKNNFAYGGLVELIVNAMTNVNPGFIEFEGAGEEE
CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKDNLRLTDVSTVDGQMVSIDLKEIPELAVDMHTMPWKPFTEEQKENTACILDEVCVLNI
CCCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCHHEEEC
PKPKNREEEEELVNKFLDGVRKLFSKENNWTFLPMLETSMDNCVQCNSCSDACHLYEMSG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCEECCCCCCHHEEEEECC
ENEMYRPNFRSEIFRRIYKQYVKKEPLAKWRYGDMNLNWKTVARLGELAYRCNLCRRCAQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TCPIGVDNGLMAREIRKVFSQELGIYPRELHERGTMNHMKAGSSTGMTPEVVKENVEFID
HCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHH
EDYAEITGVGIHTPFDVQGADIMLLHNAGEIMAWPENIASFSLIFQEAGLSWTLSSKALA
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHHHHHCCCEEEECCCEEE
YDGVNYGVFYDDAQTARIALQHMMAAKELGVKKIVIGECGHAHKALTVIADRVIPFEYQV
ECCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEC
PRESCYVTLRDIVMSGRLKLDPSRNDFPVTLHDPCNVVRLMGIVEPQREILRKIAPQFRE
CHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHC
MPCHGVDNYCCGGGSGFAIMTRNNIEQWRGNISGRKKMWQISEAFKDCLGPETRKYICAP
CCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECC
CSNCKGQIREILEHNDLYTKNNFAYGGLVELIVNAMTNVNPGFIEFEGAGEEE
CCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]