| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904045
Identifier: 220904045
GI number: 220904045
Start: 903825
End: 904814
Strand: Reverse
Name: 220904045
Synonym: Ddes_0771
Alternate gene names: NA
Gene position: 904814-903825 (Counterclockwise)
Preceding gene: 220904046
Following gene: 220904041
Centisome position: 31.49
GC content: 52.63
Gene sequence:
>990_bases GTGGCCTTTGCAAGTTTTGCCGTAGCCATGGGCAGCAGCTTCGCAGTACAGCCACTCAGGGAATTCTGGCCCCAGGACAC CGTGAACGGAAAAATCAGTTCTACCCCGCCGGAACGACGTTCATTGCATGCACGCGGCTATCTGGCCACATATGCGCTGG AACTGGGTTCCGGCTACCCCTGGCGCATGCAGAAGCAAACGCAACCGATGGAATCTCCACACGGCGTTGAGAACCTGCCG CTGCTTCCCTGCACAGATAAAATCGTTCTTATTCAAGTAGAGGCTCTGGACTACGAAATGCTTACAGAAAAGGCACGAGC AGAATACGTTATGCCTTTTCTGCACAACCTGCTGGACCATGCAGTGCTATTGCGCCTGGACGGCACAAAAAAAATGGCGT CTGCCAATTCCGACTATGAAGTATTTACCGGGCGTATCGCTTCACACAGCATCCTGCACTATGAGTATGAAACAGATTAT TCTGGCTCATTTTTGCGTTTTCTGACTCAAAAGATTTCCCCGAGCTATTCCTTCCATGGCATGCCGGGCAACTACATGAA TCAGGAGGTTGCCTACCGGCGTCAGGGGGTGCAGTATGTTTACGGGCTGGAAAAAATGCAGGCCGAAGGCGTGCCTGCTG TTGCCATATGGACGGATGGCATTGCGGCTGACACGGACCTGCTTGGCTTTGCGGCAAAAAAAATTCCCGTCAAGGGACCT TTTTTACATTTTATCATCACGCTGGACATGCACGTCATGGACCAGCCGGAAATGGTCTGCAATGCCCTGCAATTTCCGGA TGAACCACGCAACGTCTATTACTCGCTGTGCCGACACACCGACACCGCCCTTGCCGGCCTATATACGGCAACTGCCCGAA GGAACCACTGTGGCCATATGGGGCGACCACAGATCGTATACCAGCGAAGCCTCCGGCTACATTCCCTTTCTGTTTTTCGT CACAGGGCAATCACATCCTTGTGTGCATGA
Upstream 100 bases:
>100_bases TTCCTGTTATAAAGTCGCTGTTTTTCGTTATCTGTGCTTTTGTGCTGATATTTTTTTATCCAAAATTACAATATTGCCCT ATCGTAAACAGGTCGGAATA
Downstream 100 bases:
>100_bases ATCTTCCCCGCCATTGAACAGAAGTAAAATGTATCACTATCTGCAAAGAAATTTCGGGCAGCTTTTTGCTCAAAAAATAC CGGCTATAGCAAAATCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAFASFAVAMGSSFAVQPLREFWPQDTVNGKISSTPPERRSLHARGYLATYALELGSGYPWRMQKQTQPMESPHGVENLP LLPCTDKIVLIQVEALDYEMLTEKARAEYVMPFLHNLLDHAVLLRLDGTKKMASANSDYEVFTGRIASHSILHYEYETDY SGSFLRFLTQKISPSYSFHGMPGNYMNQEVAYRRQGVQYVYGLEKMQAEGVPAVAIWTDGIAADTDLLGFAAKKIPVKGP FLHFIITLDMHVMDQPEMVCNALQFPDEPRNVYYSLCRHTDTALAGLYTATARRNHCGHMGRPQIVYQRSLRLHSLSVFR HRAITSLCA
Sequences:
>Translated_329_residues MAFASFAVAMGSSFAVQPLREFWPQDTVNGKISSTPPERRSLHARGYLATYALELGSGYPWRMQKQTQPMESPHGVENLP LLPCTDKIVLIQVEALDYEMLTEKARAEYVMPFLHNLLDHAVLLRLDGTKKMASANSDYEVFTGRIASHSILHYEYETDY SGSFLRFLTQKISPSYSFHGMPGNYMNQEVAYRRQGVQYVYGLEKMQAEGVPAVAIWTDGIAADTDLLGFAAKKIPVKGP FLHFIITLDMHVMDQPEMVCNALQFPDEPRNVYYSLCRHTDTALAGLYTATARRNHCGHMGRPQIVYQRSLRLHSLSVFR HRAITSLCA >Mature_328_residues AFASFAVAMGSSFAVQPLREFWPQDTVNGKISSTPPERRSLHARGYLATYALELGSGYPWRMQKQTQPMESPHGVENLPL LPCTDKIVLIQVEALDYEMLTEKARAEYVMPFLHNLLDHAVLLRLDGTKKMASANSDYEVFTGRIASHSILHYEYETDYS GSFLRFLTQKISPSYSFHGMPGNYMNQEVAYRRQGVQYVYGLEKMQAEGVPAVAIWTDGIAADTDLLGFAAKKIPVKGPF LHFIITLDMHVMDQPEMVCNALQFPDEPRNVYYSLCRHTDTALAGLYTATARRNHCGHMGRPQIVYQRSLRLHSLSVFRH RAITSLCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37178; Mature: 37047
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFASFAVAMGSSFAVQPLREFWPQDTVNGKISSTPPERRSLHARGYLATYALELGSGYP CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHEEEEEECCCCCC WRMQKQTQPMESPHGVENLPLLPCTDKIVLIQVEALDYEMLTEKARAEYVMPFLHNLLDH CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AVLLRLDGTKKMASANSDYEVFTGRIASHSILHYEYETDYSGSFLRFLTQKISPSYSFHG EEEEEECCCHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEECC MPGNYMNQEVAYRRQGVQYVYGLEKMQAEGVPAVAIWTDGIAADTDLLGFAAKKIPVKGP CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC FLHFIITLDMHVMDQPEMVCNALQFPDEPRNVYYSLCRHTDTALAGLYTATARRNHCGHM CEEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC GRPQIVYQRSLRLHSLSVFRHRAITSLCA CCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFASFAVAMGSSFAVQPLREFWPQDTVNGKISSTPPERRSLHARGYLATYALELGSGYP CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHEEEEEECCCCCC WRMQKQTQPMESPHGVENLPLLPCTDKIVLIQVEALDYEMLTEKARAEYVMPFLHNLLDH CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AVLLRLDGTKKMASANSDYEVFTGRIASHSILHYEYETDYSGSFLRFLTQKISPSYSFHG EEEEEECCCHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEECC MPGNYMNQEVAYRRQGVQYVYGLEKMQAEGVPAVAIWTDGIAADTDLLGFAAKKIPVKGP CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCC FLHFIITLDMHVMDQPEMVCNALQFPDEPRNVYYSLCRHTDTALAGLYTATARRNHCGHM CEEEEEEEEHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC GRPQIVYQRSLRLHSLSVFRHRAITSLCA CCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA