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The map label for this gene is yrbE [C]

Identifier: 220904015

GI number: 220904015

Start: 873623

End: 874426

Strand: Reverse

Name: yrbE [C]

Synonym: Ddes_0741

Alternate gene names: 220904015

Gene position: 874426-873623 (Counterclockwise)

Preceding gene: 220904016

Following gene: 220904014

Centisome position: 30.43

GC content: 56.22

Gene sequence:

>804_bases
ATGACGCAATCCTTTGCTCCTACAGCCTTTTTACGTCGTATAGGCAGCCCCTGCCTGCGTGCCATTGATGCCCTGGGCGG
CACGGCCATTTTCTTTTTCGACGGCCTGGCCCAGATATTTGCCAGCAGAAAGATCTTTCCGCGTACAATGCAGCAACTTT
ACATCATCGGCTCAAAATCTTTCTTTCTTATCATGCTCATAGGGGTATTTTGCGGCATGGTGCTCGGCCTGCAGGGCTAT
TACACCCTGGTGCAGTTCGGCTCTGTGGGCATGCTCGGCTCTGCCGTGTCGCTGACGCTTATCCGCGAACTGGGTCCGGT
GCTCACTGCCATCATGCTTACCGGGCGTGCCGGGTCATCAATGACCGCAGAAATCGGCGTCATGCGCATTACCGACCAGA
TCGACGCCCTGGATGTGATGGACATCAATTCGATGGGCTACCTTGTGAGTCCGCGCCTTGTGGCCTCGCTCATTGCATTT
CCCCTGCTTACCGCCGTATTTGACGTCATCGGCATTATTGGCGGTTACCTCACGGGCGTACTCATGCTCGGCATCAACGA
GGGAGCCTATTTTTACCGCATTGCCAGTTCCGTGACCATGACGGACGTGGCCGGGGGCTTCATAAAGTCTGTGGTTTTCG
GCCTGCTGGTCACCACCATCTGCTGCCGTCAGGGGTATTACACCAACAAACGGCGCGACAGCGTTGGGCCGGAAGCCGTG
GGCAATGCCACCACTTCGGCCGTGGTCATATCCTGCGTGCTGATTCTGGCCGCAGACTACGTTATCACCTCTTTCCTGCT
CTGA

Upstream 100 bases:

>100_bases
CTGCGTGAAGAACTCAAACGCATGAAGCTGGGCGCGCCCATACAGGCATCCAAAAAAGCCGTTCCCGGCAAAAGCCGCAA
AACGGGCAGATGAGGAAGTC

Downstream 100 bases:

>100_bases
TATGCCGACGCTCAACGCCAAAGGGCCTGTCACGGTTATGGGCATAGACCCCGGCTCGCAACGCACGGGCTGGGGCGTGG
TGCGCGAAGTTTCAGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTQSFAPTAFLRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKSFFLIMLIGVFCGMVLGLQGY
YTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAF
PLLTAVFDVIGIIGGYLTGVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAV
GNATTSAVVISCVLILAADYVITSFLL

Sequences:

>Translated_267_residues
MTQSFAPTAFLRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKSFFLIMLIGVFCGMVLGLQGY
YTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAF
PLLTAVFDVIGIIGGYLTGVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAV
GNATTSAVVISCVLILAADYVITSFLL
>Mature_266_residues
TQSFAPTAFLRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKSFFLIMLIGVFCGMVLGLQGYY
TLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFP
LLTAVFDVIGIIGGYLTGVLMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAVG
NATTSAVVISCVLILAADYVITSFLL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=38.3720930232558, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28496; Mature: 28365

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSFAPTAFLRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKS
CCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
FFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLTGV
CHHHHHHEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAV
HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
GNATTSAVVISCVLILAADYVITSFLL
CCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQSFAPTAFLRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKS
CCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
FFLIMLIGVFCGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MTAEIGVMRITDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLTGV
CHHHHHHEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLGINEGAYFYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAV
HHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
GNATTSAVVISCVLILAADYVITSFLL
CCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA