| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904001
Identifier: 220904001
GI number: 220904001
Start: 853890
End: 854318
Strand: Direct
Name: 220904001
Synonym: Ddes_0727
Alternate gene names: NA
Gene position: 853890-854318 (Clockwise)
Preceding gene: 220904000
Following gene: 220904002
Centisome position: 29.72
GC content: 54.08
Gene sequence:
>429_bases ATGCGCTATCTGCTTATTATGGTTATGGCTATGGCTTTGACTGTTCCCGTTCATGCTGCTGACAAAACCGTATCCGGCGA GGGCGCTCAGGCCGTCACCGCGCCTGCGCCGCAAAAGGGTAAACCCCGGCACGAAAAAGTTCAGGGGATGACAAATCTTC ATGAGGTGGATACCGTTGCAAAAGCGTTGAAAGCCCCTGACAAAAGCCCTGTCATGATTGTGGGCCGAATTGTGGAAAAG GTGGACAGCAAGAAAAACCGCTTTATTGTGGATGACGGTACGGGCCGTATGGCTGTATCCATCGGCCAGAAAACCCTCAA GGGAATAACGCTTACCCCCGACATGAAGGTGCGCCTTGTGGGCAAGGTCAGAGCAAAGGACGGCAAGGAGCCTGTGGTGG GCGTCAAGGCCCTGCACGTTCTCAACTAG
Upstream 100 bases:
>100_bases GTTTTTTTGTTCCTAACGCTTCGCTGACGTGCGTGGGTGCAGGTTTTATCTGCGGCCGCACATGCGTTCCGCGCACCCGG TAAATTTTTTGGAGGATTAT
Downstream 100 bases:
>100_bases TATCAATAGGACCCGGAACAGTTACCGCCTGAAATGGTTGCCTGGCGGTGAATCGGCGCTGCAGTTCTGGTCCGTAATTT CCTTTGGCGTAACGGTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRYLLIMVMAMALTVPVHAADKTVSGEGAQAVTAPAPQKGKPRHEKVQGMTNLHEVDTVAKALKAPDKSPVMIVGRIVEK VDSKKNRFIVDDGTGRMAVSIGQKTLKGITLTPDMKVRLVGKVRAKDGKEPVVGVKALHVLN
Sequences:
>Translated_142_residues MRYLLIMVMAMALTVPVHAADKTVSGEGAQAVTAPAPQKGKPRHEKVQGMTNLHEVDTVAKALKAPDKSPVMIVGRIVEK VDSKKNRFIVDDGTGRMAVSIGQKTLKGITLTPDMKVRLVGKVRAKDGKEPVVGVKALHVLN >Mature_142_residues MRYLLIMVMAMALTVPVHAADKTVSGEGAQAVTAPAPQKGKPRHEKVQGMTNLHEVDTVAKALKAPDKSPVMIVGRIVEK VDSKKNRFIVDDGTGRMAVSIGQKTLKGITLTPDMKVRLVGKVRAKDGKEPVVGVKALHVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15227; Mature: 15227
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLIMVMAMALTVPVHAADKTVSGEGAQAVTAPAPQKGKPRHEKVQGMTNLHEVDTVA CHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH KALKAPDKSPVMIVGRIVEKVDSKKNRFIVDDGTGRMAVSIGQKTLKGITLTPDMKVRLV HHHHCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCEEEEEECHHHHCCEEECCCCEEEEE GKVRAKDGKEPVVGVKALHVLN EEEECCCCCCCEEHHHEEEECC >Mature Secondary Structure MRYLLIMVMAMALTVPVHAADKTVSGEGAQAVTAPAPQKGKPRHEKVQGMTNLHEVDTVA CHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH KALKAPDKSPVMIVGRIVEKVDSKKNRFIVDDGTGRMAVSIGQKTLKGITLTPDMKVRLV HHHHCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCEEEEEECHHHHCCEEECCCCEEEEE GKVRAKDGKEPVVGVKALHVLN EEEECCCCCCCEEHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA