| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903988
Identifier: 220903988
GI number: 220903988
Start: 842348
End: 843337
Strand: Reverse
Name: 220903988
Synonym: Ddes_0714
Alternate gene names: NA
Gene position: 843337-842348 (Counterclockwise)
Preceding gene: 220903989
Following gene: 220903987
Centisome position: 29.35
GC content: 59.7
Gene sequence:
>990_bases ATGTCCAACTCTATGGGTCTTGTGGTTTCCCTGGCGGAAATGGAACAGTTTTATCGTGGCGACAAGGCGGGACAAATCAT CGAACTGATGAACAAGACCAATGACATCATGGATGACGTGCTCTGGATGGAGTCCAACCAGAGCGACGGACATCTTACCC GCATCCGCACCGGCCTGCCCGAGGTTTACTGGCGCAGGCTCTATCAGGGTACACCGCCGTCCAAGTCACAGTGGGGGCAG GTCAAGGAAGGCTGCGGCATCCTCGAGGCCATCATGGAGCTGGACGTGGAAGAGCTGCGCCTCTACGGCAGCCGCGACAG GGCCTTTCGCATGAGCGAGGGCGTGGCCTTTGCCGAAGCCATGCGCCAGAAAGTGGCCGCCACACTTTTTTACGGCAACA GCAATATCAATCCTGACGAATTCAACGGCCTGGCCATGCGCTATCCCGCGCAGGACGCCAAAAACGTGATGGATGCGGGC GGCCGCGAAGAAGGGGGCTGCACCTCCTTGTGGCTTGTATCGTGGGGAGCGCAGGCCGTACATGGCATTTATCCCAAGGA CAGCACCGGCGGACTTTCTCACGAAGACCTCAGTACCTATATGGCCCAGGACCCCGACGGGCGCAAATATCAGGTCGTGG GCGACAAATACAACTGGCGCTGCGGTCTTGCCGTGCGCGACTGGCGCGCTGTGGTGCGCGTTGCCAACCTGCCCCTGGCA GCCCTTGGCAAGCGCAAGGGGCAGAGCGGATTCATCGACCTGCAAAAGCTGACCATCGAGGCCAAGAACCGCATGCCCCA GCATCTGCGCCAGAAAGCCGTGTGGTACGCCAATGCCGATGTACTCACTGCCCTTGAGTTGCAGAACTCCGATGCGGGCA ACGTGCAACTGCAGTATGACGAATTCTTTGATGCCAAGGCCGTTCCCGTGTTGCACGGCCGCCCTGTGCGCCAGTGCGAT GCCGTGCTGGGCAACGAAAGCGTGGTGTAA
Upstream 100 bases:
>100_bases ACAGTTGCCTGCCGTGAAAACGGCACGCAGCGAATTGCCCGGATAGCTTCCGGCACGTTTTTTCATCCCGCACATTCACC TTTCTACATACGAGGCGACT
Downstream 100 bases:
>100_bases ACACCTTACTGCAGACCCGGGGCTGCCGAAAAGCCCCGGCGTCCCACCGGGTAAGGCGTGTCTGCCCTGTCAGCGCCGGG CCGAACATTTGCTACCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSNSMGLVVSLAEMEQFYRGDKAGQIIELMNKTNDIMDDVLWMESNQSDGHLTRIRTGLPEVYWRRLYQGTPPSKSQWGQ VKEGCGILEAIMELDVEELRLYGSRDRAFRMSEGVAFAEAMRQKVAATLFYGNSNINPDEFNGLAMRYPAQDAKNVMDAG GREEGGCTSLWLVSWGAQAVHGIYPKDSTGGLSHEDLSTYMAQDPDGRKYQVVGDKYNWRCGLAVRDWRAVVRVANLPLA ALGKRKGQSGFIDLQKLTIEAKNRMPQHLRQKAVWYANADVLTALELQNSDAGNVQLQYDEFFDAKAVPVLHGRPVRQCD AVLGNESVV
Sequences:
>Translated_329_residues MSNSMGLVVSLAEMEQFYRGDKAGQIIELMNKTNDIMDDVLWMESNQSDGHLTRIRTGLPEVYWRRLYQGTPPSKSQWGQ VKEGCGILEAIMELDVEELRLYGSRDRAFRMSEGVAFAEAMRQKVAATLFYGNSNINPDEFNGLAMRYPAQDAKNVMDAG GREEGGCTSLWLVSWGAQAVHGIYPKDSTGGLSHEDLSTYMAQDPDGRKYQVVGDKYNWRCGLAVRDWRAVVRVANLPLA ALGKRKGQSGFIDLQKLTIEAKNRMPQHLRQKAVWYANADVLTALELQNSDAGNVQLQYDEFFDAKAVPVLHGRPVRQCD AVLGNESVV >Mature_328_residues SNSMGLVVSLAEMEQFYRGDKAGQIIELMNKTNDIMDDVLWMESNQSDGHLTRIRTGLPEVYWRRLYQGTPPSKSQWGQV KEGCGILEAIMELDVEELRLYGSRDRAFRMSEGVAFAEAMRQKVAATLFYGNSNINPDEFNGLAMRYPAQDAKNVMDAGG REEGGCTSLWLVSWGAQAVHGIYPKDSTGGLSHEDLSTYMAQDPDGRKYQVVGDKYNWRCGLAVRDWRAVVRVANLPLAA LGKRKGQSGFIDLQKLTIEAKNRMPQHLRQKAVWYANADVLTALELQNSDAGNVQLQYDEFFDAKAVPVLHGRPVRQCDA VLGNESVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36775; Mature: 36644
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSMGLVVSLAEMEQFYRGDKAGQIIELMNKTNDIMDDVLWMESNQSDGHLTRIRTGLP CCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH EVYWRRLYQGTPPSKSQWGQVKEGCGILEAIMELDVEELRLYGSRDRAFRMSEGVAFAEA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEHHCCHHHHHH MRQKVAATLFYGNSNINPDEFNGLAMRYPAQDAKNVMDAGGREEGGCTSLWLVSWGAQAV HHHHHHEEEEECCCCCCHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHH HGIYPKDSTGGLSHEDLSTYMAQDPDGRKYQVVGDKYNWRCGLAVRDWRAVVRVANLPLA HCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEECCCHHHHHHHHHHHCCCHH ALGKRKGQSGFIDLQKLTIEAKNRMPQHLRQKAVWYANADVLTALELQNSDAGNVQLQYD HHHCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHEEEECCCEEEEEEECCCCCCCEEEEEC EFFDAKAVPVLHGRPVRQCDAVLGNESVV CCCCCCCCCEECCCCHHHHHHHHCCCCCC >Mature Secondary Structure SNSMGLVVSLAEMEQFYRGDKAGQIIELMNKTNDIMDDVLWMESNQSDGHLTRIRTGLP CCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH EVYWRRLYQGTPPSKSQWGQVKEGCGILEAIMELDVEELRLYGSRDRAFRMSEGVAFAEA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEHHCCHHHHHH MRQKVAATLFYGNSNINPDEFNGLAMRYPAQDAKNVMDAGGREEGGCTSLWLVSWGAQAV HHHHHHEEEEECCCCCCHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHH HGIYPKDSTGGLSHEDLSTYMAQDPDGRKYQVVGDKYNWRCGLAVRDWRAVVRVANLPLA HCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEECCCHHHHHHHHHHHCCCHH ALGKRKGQSGFIDLQKLTIEAKNRMPQHLRQKAVWYANADVLTALELQNSDAGNVQLQYD HHHCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHEEEECCCEEEEEEECCCCCCCEEEEEC EFFDAKAVPVLHGRPVRQCDAVLGNESVV CCCCCCCCCEECCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA