| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903983
Identifier: 220903983
GI number: 220903983
Start: 836829
End: 838898
Strand: Reverse
Name: 220903983
Synonym: Ddes_0709
Alternate gene names: NA
Gene position: 838898-836829 (Counterclockwise)
Preceding gene: 220903984
Following gene: 220903982
Centisome position: 29.19
GC content: 60.34
Gene sequence:
>2070_bases ATGCCCATACGCATTGCCTGCAACAACTTTACCGGCGGCGAAATAGCGCCCACCCTGTCTGCGCGCTATGATCTGGCCCG TTACCGCAACTGCCTGTCCTGCATGGAAAACATGCTGCCCGGCCTGCACGGTGACACGGCCCGGCGCCCCGGCACACGTT TTGTGGCGAATCTGGACGGACATTCCGTTCTCATCCCTTTCAGTTTCAATGCCCTGACCAGTCAGAATTTTGTGCTTGTT TTCGGCAGTCACTGCCTGCACATCGCGGGCGAACAGGGTCTTGAAAATATTCCTGTGATTGAAACGCCATATGCCCCCGG TGAATTACAGGACATTTCCTACGCCCAGGTGGGCGATACCGTGTACCTGGCTCACAGCAACCACCCTCTGCACAAGGTGG TACGGCGCGATGCGCCGGAAAACCGGACGCAATTTGAAGAGGCGGCCTATGCCTGGAGCCTTGAAAAAGTGGCGCTCAAC GCATCCCTTGCTGCGCCCGAGTTACCTTCGGTGACATTTTCCGGCAGCGCGGGCAGCTATACCCTGCGCTACAAGGTTGC TGCCGTGGATGCCGCCGGGCGTGAGTCTCTTCCTTCACCCGCCGGGCAGTGCGCCAATGGCCGCCACCCGTCCGACTGGG TGCAGGGCAACAGCGCAGCCATAAGCTGGGCCGCAGTGGAAGGAGCCGTGGAATACAATATCTACAGGGAAGAAGCAGGC TACTTCGGCTTTATCGGCGTATCCGGCGGCCTGAACTTCAATGACCAGAACTATCAGGCCGATACAGCGGATACGCCCAA GGAAGACTGGGACCCGTTCGCCGATGGCAACTATCCCGGCATTGTGGCCTTTCATCAGCAGCGTATGGTTCTGGCCGCCA CTCCCAAAAATCCACAGGCATTTTACATGTCGCGCGTGGGAGATTTTGAAAACTTCCGTAAATCAAGACCATTGCAGGAT GACGACCCTGTGGAATACCTCATTGCCTCCGGCTCCATCGATGCCGTCACCTGGGCAGCCAGCTTCGGCGACCTGCTCAT CGGCACGTCGGGCAGTGAATACAAGGCCTCAGGCGGCGATGGCGCGTCCATAACCGCAGGCAATATCAGCATCACGGCCC AGAGCTACTGGGGCAGCGCGGGCCTTGCGCCCATCATTATCGGCAACTCCATCCTGCATGTGCAGCGTCACGGCTCCCGC GTGCGCGACCTTTTCTACTCACTGGAAAAGGACGGTTACGCGGGCAACGACCTTTCCATCATGGCCCCGCACCTTTTTGA GGGGCATACCATCCTTCAGTGGGCCTACCAGCAGACGCCGGGATCTACCATCTGGTGCGTACGTGACGACGGCCTGCTGC TGGCCTTCACCTATATGAAAGAGCACGATATCTGGGGCTGGTCGCGTCAGATCACGCAAGGCAGGGTACTTTCGGCAGCG GCCATTTCCGGCGAAAAAGGCGACACCCTCATGCTGGTGACGGAACGCCGCATTGACGGGCAGCCGCGCATCTTTCTGGA GCGTCTGGCGGATCAGTGGCAAGACCACGAACCTGTGGAAGAAGCGTACTTTGCGGACTGCGGCCTGACGTTCCGGCTTC CCGCCCCCGCCCTGACCCTGGAGGGTCTGGATCATCTTGAAGGCTGCGAGCTGGCCGTGCTGGCAGACGGCAGCCCTGTG GAAGGCTGCGTGGTGCATCAGGGCCGCATAAGGCTGCCCTATGCGGCAAGCGTGGTACAGGCGGGCCTGCCTTACGCCTC GGCTCTTTCATGCCTGCCTGTGGAGCACGACAGCCAGTACGGCACAAGCCTTGGCCGCCAGCGCGCCTACGGCATGTGCA CGGCGCGCCTGTACCGGAGCGTGGGCGGCAAGTACGGCCCGGACAGGCATGAACTGTATGATCTGCCCTTTTTGCCGGAT CACTGGGGCCAGGCTGTTCTTCCCTATTCCGGCGAAGTGTCGTTTGCGCCCGGCGGCTCGTGGGAGACTTCCGGCAGTTT GTGGCTGGTGCAGGACAGGCCCCTGCCCTTCAGGCTGCTGTCTCTGGTGCTGGAGGTAAACTTTTCCTGA
Upstream 100 bases:
>100_bases CCTACCGTCAGTTTTTACGTGATCTGCCCGCGCAGGAAGGCGCGCCTTTTGACGGTGGCGGCGAACTGACGCCGTGGCCG CATATGCCGGAGGTATGATC
Downstream 100 bases:
>100_bases AATAGAGTAATTCTGAAATGCTTTGTGGGGGAGGGACACTTTTGCAAAAGGGTCACCTCCCCCACCCCCCCACCCCCTAA AATCTTTACTCTTGTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MPIRIACNNFTGGEIAPTLSARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANLDGHSVLIPFSFNALTSQNFVLV FGSHCLHIAGEQGLENIPVIETPYAPGELQDISYAQVGDTVYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALN ASLAAPELPSVTFSGSAGSYTLRYKVAAVDAAGRESLPSPAGQCANGRHPSDWVQGNSAAISWAAVEGAVEYNIYREEAG YFGFIGVSGGLNFNDQNYQADTADTPKEDWDPFADGNYPGIVAFHQQRMVLAATPKNPQAFYMSRVGDFENFRKSRPLQD DDPVEYLIASGSIDAVTWAASFGDLLIGTSGSEYKASGGDGASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSR VRDLFYSLEKDGYAGNDLSIMAPHLFEGHTILQWAYQQTPGSTIWCVRDDGLLLAFTYMKEHDIWGWSRQITQGRVLSAA AISGEKGDTLMLVTERRIDGQPRIFLERLADQWQDHEPVEEAYFADCGLTFRLPAPALTLEGLDHLEGCELAVLADGSPV EGCVVHQGRIRLPYAASVVQAGLPYASALSCLPVEHDSQYGTSLGRQRAYGMCTARLYRSVGGKYGPDRHELYDLPFLPD HWGQAVLPYSGEVSFAPGGSWETSGSLWLVQDRPLPFRLLSLVLEVNFS
Sequences:
>Translated_689_residues MPIRIACNNFTGGEIAPTLSARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANLDGHSVLIPFSFNALTSQNFVLV FGSHCLHIAGEQGLENIPVIETPYAPGELQDISYAQVGDTVYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALN ASLAAPELPSVTFSGSAGSYTLRYKVAAVDAAGRESLPSPAGQCANGRHPSDWVQGNSAAISWAAVEGAVEYNIYREEAG YFGFIGVSGGLNFNDQNYQADTADTPKEDWDPFADGNYPGIVAFHQQRMVLAATPKNPQAFYMSRVGDFENFRKSRPLQD DDPVEYLIASGSIDAVTWAASFGDLLIGTSGSEYKASGGDGASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSR VRDLFYSLEKDGYAGNDLSIMAPHLFEGHTILQWAYQQTPGSTIWCVRDDGLLLAFTYMKEHDIWGWSRQITQGRVLSAA AISGEKGDTLMLVTERRIDGQPRIFLERLADQWQDHEPVEEAYFADCGLTFRLPAPALTLEGLDHLEGCELAVLADGSPV EGCVVHQGRIRLPYAASVVQAGLPYASALSCLPVEHDSQYGTSLGRQRAYGMCTARLYRSVGGKYGPDRHELYDLPFLPD HWGQAVLPYSGEVSFAPGGSWETSGSLWLVQDRPLPFRLLSLVLEVNFS >Mature_688_residues PIRIACNNFTGGEIAPTLSARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANLDGHSVLIPFSFNALTSQNFVLVF GSHCLHIAGEQGLENIPVIETPYAPGELQDISYAQVGDTVYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALNA SLAAPELPSVTFSGSAGSYTLRYKVAAVDAAGRESLPSPAGQCANGRHPSDWVQGNSAAISWAAVEGAVEYNIYREEAGY FGFIGVSGGLNFNDQNYQADTADTPKEDWDPFADGNYPGIVAFHQQRMVLAATPKNPQAFYMSRVGDFENFRKSRPLQDD DPVEYLIASGSIDAVTWAASFGDLLIGTSGSEYKASGGDGASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSRV RDLFYSLEKDGYAGNDLSIMAPHLFEGHTILQWAYQQTPGSTIWCVRDDGLLLAFTYMKEHDIWGWSRQITQGRVLSAAA ISGEKGDTLMLVTERRIDGQPRIFLERLADQWQDHEPVEEAYFADCGLTFRLPAPALTLEGLDHLEGCELAVLADGSPVE GCVVHQGRIRLPYAASVVQAGLPYASALSCLPVEHDSQYGTSLGRQRAYGMCTARLYRSVGGKYGPDRHELYDLPFLPDH WGQAVLPYSGEVSFAPGGSWETSGSLWLVQDRPLPFRLLSLVLEVNFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75190; Mature: 75059
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRIACNNFTGGEIAPTLSARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANLDG CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC HSVLIPFSFNALTSQNFVLVFGSHCLHIAGEQGLENIPVIETPYAPGELQDISYAQVGDT CEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCE VYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALNASLAAPELPSVTFSGSAGSY EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHEEEEHEEEECCCCCCCCCCEEECCCCCCE TLRYKVAAVDAAGRESLPSPAGQCANGRHPSDWVQGNSAAISWAAVEGAVEYNIYREEAG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCEEEEEEEEECCC YFGFIGVSGGLNFNDQNYQADTADTPKEDWDPFADGNYPGIVAFHQQRMVLAATPKNPQA EEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCHH FYMSRVGDFENFRKSRPLQDDDPVEYLIASGSIDAVTWAASFGDLLIGTSGSEYKASGGD HHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEECCCCC GASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSRVRDLFYSLEKDGYAGNDLSI CCEEEECCEEEEEECCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEE MAPHLFEGHTILQWAYQQTPGSTIWCVRDDGLLLAFTYMKEHDIWGWSRQITQGRVLSAA ECCHHHCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEHHCCCCCHHHHHCCCCEEEEE AISGEKGDTLMLVTERRIDGQPRIFLERLADQWQDHEPVEEAYFADCGLTFRLPAPALTL EECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCEEEC EGLDHLEGCELAVLADGSPVEGCVVHQGRIRLPYAASVVQAGLPYASALSCLPVEHDSQY CCCCCCCCCCEEEEECCCCCCEEEEECCEEECCHHHHHHHHCCCHHHHHEEECCCCCCHH GTSLGRQRAYGMCTARLYRSVGGKYGPDRHELYDLPFLPDHWGQAVLPYSGEVSFAPGGS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCEEECCCCEEEECCCCC WETSGSLWLVQDRPLPFRLLSLVLEVNFS CCCCCCEEEEECCCCHHHHHHHHHEECCC >Mature Secondary Structure PIRIACNNFTGGEIAPTLSARYDLARYRNCLSCMENMLPGLHGDTARRPGTRFVANLDG CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC HSVLIPFSFNALTSQNFVLVFGSHCLHIAGEQGLENIPVIETPYAPGELQDISYAQVGDT CEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCE VYLAHSNHPLHKVVRRDAPENRTQFEEAAYAWSLEKVALNASLAAPELPSVTFSGSAGSY EEEEECCCCHHHHHHCCCCCCHHHHHHHHHHEEEEHEEEECCCCCCCCCCEEECCCCCCE TLRYKVAAVDAAGRESLPSPAGQCANGRHPSDWVQGNSAAISWAAVEGAVEYNIYREEAG EEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCEEEEEEEEECCC YFGFIGVSGGLNFNDQNYQADTADTPKEDWDPFADGNYPGIVAFHQQRMVLAATPKNPQA EEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCHH FYMSRVGDFENFRKSRPLQDDDPVEYLIASGSIDAVTWAASFGDLLIGTSGSEYKASGGD HHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCEECCCCC GASITAGNISITAQSYWGSAGLAPIIIGNSILHVQRHGSRVRDLFYSLEKDGYAGNDLSI CCEEEECCEEEEEECCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEE MAPHLFEGHTILQWAYQQTPGSTIWCVRDDGLLLAFTYMKEHDIWGWSRQITQGRVLSAA ECCHHHCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEHHCCCCCHHHHHCCCCEEEEE AISGEKGDTLMLVTERRIDGQPRIFLERLADQWQDHEPVEEAYFADCGLTFRLPAPALTL EECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCEEEC EGLDHLEGCELAVLADGSPVEGCVVHQGRIRLPYAASVVQAGLPYASALSCLPVEHDSQY CCCCCCCCCCEEEEECCCCCCEEEEECCEEECCHHHHHHHHCCCHHHHHEEECCCCCCHH GTSLGRQRAYGMCTARLYRSVGGKYGPDRHELYDLPFLPDHWGQAVLPYSGEVSFAPGGS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCEEECCCCEEEECCCCC WETSGSLWLVQDRPLPFRLLSLVLEVNFS CCCCCCEEEEECCCCHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA