| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903971
Identifier: 220903971
GI number: 220903971
Start: 827645
End: 828964
Strand: Reverse
Name: 220903971
Synonym: Ddes_0697
Alternate gene names: NA
Gene position: 828964-827645 (Counterclockwise)
Preceding gene: 220903972
Following gene: 220903970
Centisome position: 28.85
GC content: 65.68
Gene sequence:
>1320_bases GTGCTCTGCTTTATCAAGCTTGCCATGCTTGCCATGCTTCTGCTGGATGTGCCGTTGCCCGCATGGCTTGACGGCCGCCC CTCGCAGCTTGCCTCAAACGACCCGTCACAGATGCCCGCTGATGCTCCTTCCGACGCCGACATAATGGAAAGGCTCACCG CTCTTGTGGCCGCCAGTCAGCCCAAAGACAATGAAGGTCCCACCCATTCCCCGGTCAGCAGTGCAAACACGGTCCCTGAG CCCCTCCCGGCAACCCCTGCCGTAAACCACAATCCGGCGCAGGCCCGTGGCGAAGCCCACGGCAGTGCCCCCCAGGGTTC GGAAGCCGCACGGCTGGCCGCAGCCGCACGCCCCAGACAAAGGGATACCACCCCGACCACAGGCCGCATGCTTGATGCCG ACGCCCTGCCCACGCCGCTGGTCACTGCCGGAGTACATCCGGCCGGCCCCGCCGAGATCCAGATTTTTACCCCTGACAGC ACGGACAGCCCCGCCCCTCTGCCCGCACCCCTTGCCCAGCCGGGCATCAGCGCTCCCCGCCAGGATACTATGGGGGTATC TGCCAATGCCGCGGATAAAAACGCCGCACCCCGTCATGGCTGGCTTGAATCCCTAGGCCTTGCCGGGCTGCCGGTCCCCG CGCTCGGCAGCGTGCAGGCCGCCCATGCGGCGGCACTGGATATGCCCGTGCCGCAAGCGCCGTCTTCTGCGCCGACCTCA CCCTTTGCCCCGGCAGAGCAGGCCGCGCCCTACTCCTTGCCGGGAGCGCCCGACATCCCGGCCAATATTCCGCGCGGGCA AAGCACGGACGGCGCCCCCCTGCCCCCACGCGGCGCTTCCGGTTCCAACAGTTTCGGCTCCGCATCCGGCTCGGGTGCGG CGGGCATACCCGCCCTGCCCCAGAGCAACCAGCCGGGGCTGCCCGCCGTGCCGCCCCCGGCAGTCCGTCCGGTCCCCTCG GGGACGGATCCCAACCTCAAGGCGCAGGAACTTGCCCGGCAGCAGCAGGATATTCTCATGCTGCGCCAGCAGATGGACCA ACGGCTCAAGGACATCCAGAACGCCGAACAAAAAATGAAAGACATGATCCGCGAAGCGCGCGGTATTGAAGACGAAAAAA TCCGCCGTCTCGTGCTCACCTACACCCAGATGAAGCCCAAAGCCGCCGCCAAGGCGCTGGAAAGCATGGATGAGCGCGTG GCTGTGCGCATTCTGACGGGCATGTCCCCCAAGCAGTCCGGCGACATCCTCACCTACGTCAACCCGGCAAAAACCGCCAA ACTGACGGAAATCATCACCCGCATGAAGCTGCCAGAATAA
Upstream 100 bases:
>100_bases CATGTTCGCGAGGAACAACTCAAGGAGCAACGCATCAATGACGAAACAGCCACCCTCCGCTACAAAGCTCCGACTTTCTA AGCTGTTCCGCTGGCTGGCG
Downstream 100 bases:
>100_bases TGCGCCTGAAACTTCTTATTTCCTACGTGGGCACTGGCTACAGCGGCTGGCAGATTCAGGAAAAACCCAAACCGCCGCCT ACGGTGCAGGGCGCTCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLCFIKLAMLAMLLLDVPLPAWLDGRPSQLASNDPSQMPADAPSDADIMERLTALVAASQPKDNEGPTHSPVSSANTVPE PLPATPAVNHNPAQARGEAHGSAPQGSEAARLAAAARPRQRDTTPTTGRMLDADALPTPLVTAGVHPAGPAEIQIFTPDS TDSPAPLPAPLAQPGISAPRQDTMGVSANAADKNAAPRHGWLESLGLAGLPVPALGSVQAAHAAALDMPVPQAPSSAPTS PFAPAEQAAPYSLPGAPDIPANIPRGQSTDGAPLPPRGASGSNSFGSASGSGAAGIPALPQSNQPGLPAVPPPAVRPVPS GTDPNLKAQELARQQQDILMLRQQMDQRLKDIQNAEQKMKDMIREARGIEDEKIRRLVLTYTQMKPKAAAKALESMDERV AVRILTGMSPKQSGDILTYVNPAKTAKLTEIITRMKLPE
Sequences:
>Translated_439_residues MLCFIKLAMLAMLLLDVPLPAWLDGRPSQLASNDPSQMPADAPSDADIMERLTALVAASQPKDNEGPTHSPVSSANTVPE PLPATPAVNHNPAQARGEAHGSAPQGSEAARLAAAARPRQRDTTPTTGRMLDADALPTPLVTAGVHPAGPAEIQIFTPDS TDSPAPLPAPLAQPGISAPRQDTMGVSANAADKNAAPRHGWLESLGLAGLPVPALGSVQAAHAAALDMPVPQAPSSAPTS PFAPAEQAAPYSLPGAPDIPANIPRGQSTDGAPLPPRGASGSNSFGSASGSGAAGIPALPQSNQPGLPAVPPPAVRPVPS GTDPNLKAQELARQQQDILMLRQQMDQRLKDIQNAEQKMKDMIREARGIEDEKIRRLVLTYTQMKPKAAAKALESMDERV AVRILTGMSPKQSGDILTYVNPAKTAKLTEIITRMKLPE >Mature_439_residues MLCFIKLAMLAMLLLDVPLPAWLDGRPSQLASNDPSQMPADAPSDADIMERLTALVAASQPKDNEGPTHSPVSSANTVPE PLPATPAVNHNPAQARGEAHGSAPQGSEAARLAAAARPRQRDTTPTTGRMLDADALPTPLVTAGVHPAGPAEIQIFTPDS TDSPAPLPAPLAQPGISAPRQDTMGVSANAADKNAAPRHGWLESLGLAGLPVPALGSVQAAHAAALDMPVPQAPSSAPTS PFAPAEQAAPYSLPGAPDIPANIPRGQSTDGAPLPPRGASGSNSFGSASGSGAAGIPALPQSNQPGLPAVPPPAVRPVPS GTDPNLKAQELARQQQDILMLRQQMDQRLKDIQNAEQKMKDMIREARGIEDEKIRRLVLTYTQMKPKAAAKALESMDERV AVRILTGMSPKQSGDILTYVNPAKTAKLTEIITRMKLPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45616; Mature: 45616
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCFIKLAMLAMLLLDVPLPAWLDGRPSQLASNDPSQMPADAPSDADIMERLTALVAASQ CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC PKDNEGPTHSPVSSANTVPEPLPATPAVNHNPAQARGEAHGSAPQGSEAARLAAAARPRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC RDTTPTTGRMLDADALPTPLVTAGVHPAGPAEIQIFTPDSTDSPAPLPAPLAQPGISAPR CCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC QDTMGVSANAADKNAAPRHGWLESLGLAGLPVPALGSVQAAHAAALDMPVPQAPSSAPTS CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PFAPAEQAAPYSLPGAPDIPANIPRGQSTDGAPLPPRGASGSNSFGSASGSGAAGIPALP CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSNQPGLPAVPPPAVRPVPSGTDPNLKAQELARQQQDILMLRQQMDQRLKDIQNAEQKMK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMIREARGIEDEKIRRLVLTYTQMKPKAAAKALESMDERVAVRILTGMSPKQSGDILTYV HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE NPAKTAKLTEIITRMKLPE CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLCFIKLAMLAMLLLDVPLPAWLDGRPSQLASNDPSQMPADAPSDADIMERLTALVAASQ CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC PKDNEGPTHSPVSSANTVPEPLPATPAVNHNPAQARGEAHGSAPQGSEAARLAAAARPRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC RDTTPTTGRMLDADALPTPLVTAGVHPAGPAEIQIFTPDSTDSPAPLPAPLAQPGISAPR CCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC QDTMGVSANAADKNAAPRHGWLESLGLAGLPVPALGSVQAAHAAALDMPVPQAPSSAPTS CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PFAPAEQAAPYSLPGAPDIPANIPRGQSTDGAPLPPRGASGSNSFGSASGSGAAGIPALP CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QSNQPGLPAVPPPAVRPVPSGTDPNLKAQELARQQQDILMLRQQMDQRLKDIQNAEQKMK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMIREARGIEDEKIRRLVLTYTQMKPKAAAKALESMDERVAVRILTGMSPKQSGDILTYV HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE NPAKTAKLTEIITRMKLPE CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA