| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is lon [H]
Identifier: 220903968
GI number: 220903968
Start: 823352
End: 825793
Strand: Direct
Name: lon [H]
Synonym: Ddes_0694
Alternate gene names: 220903968
Gene position: 823352-825793 (Clockwise)
Preceding gene: 220903967
Following gene: 220903969
Centisome position: 28.65
GC content: 58.03
Gene sequence:
>2442_bases ATGACTGAATCCGTACGCGGTACTGGAAAACTTGTGGAACTGCCCGTCATGCCTCTGCGTGAGGTGGTCATGTTTCCGCG CTCCATCATGCCGCTTTTTGTGGGGCGTGAAGCCTCCATCAAGGCCATAGAGGCCGCTCAGGCCAGCTACAGCAAACAGA TTTTTCTGGTGGCCCAGCTCGAGCCGGAACTGGAAAAACCCGAAGCCGGAGACCTGGCTCCCGTGGGTGTGGTCAGCAAG GTTCTGCAGATGCTGCGCCTGCCCGACGGCACCATAAAGGTGCTGTTTGAAGGCATGTATCGTGCCGATTGGGAAGACAT GCACGAAAACGAGCAGTGCGCCGTTGTGCGCGCGGCCCGGCGCGGCGAGGCGCAAAGCCGCCCCGAGGAGCGCGAAGCTC TTGTGCGCGCAGTGCATGAGGCTCTGGAAGAGTTTGCCAAGGGCAACAAGAAGCTCTCGCAGGAATCTGTGCTTTCCATG ATGGCGCTGCATGAGCCAGGCCCGCTGGCCGATTCCATTATCCCCAATCTCAAGGTGGACTACCGCAAAAAGCAGCAGGC CCTGGAGATGGACGACGTGACCGAGCGGCTGGAGCTGGCCTATGAGCTGCTTCACGGTGAGGTGGCGCTGGCCACGGTGG AAAAGCGCATTAAAAATCGTGTCAAGGTACAGATGGAGCGCAATCAGCGCGAGTATTACCTTAACGAGCAGATCAAGGCC ATCAACAAGGAAATGGGGCGCGACGACGACCCCCAGGCCGAGGTGGACGAGATAGAGCAAAAGCTCAAGGCGCGCGACAT GCCCGAAGAAGCGCGCCAGAAAGCCCTTGGCGAAGCCAAAAAACTGCGCAGCATGCCGCCTTCGGCTGCCGAATATACGG TTGTGCGCAACTATGTGGACTGGATTCTCGATCTGCCGTGGAATGACCTCAAGCAGGTTGATATCAATATCGAAAAGGCC CGCAATATTCTGGACGGCGACCACTATGGTCTTGAAAAGCCCAAAGAGCGCATCCTTGAATACCTGGCAGTGCAAAAGCT TTCCCAGGGGCTGAAGGGGCCGATTCTCTGTTTTGTGGGGCCTCCGGGCGTGGGCAAAACGTCTCTGGCGCGGTCTGTGG CCAAGGCCACAGGGCGGGATTTCGTGCGTCTGTCACTCGGCGGCGTACGCGATGAGGCCGAAATTCGCGGCCACCGCCGT ACCTATGTGGGCGCGCTGCCGGGCAAGATCATCCAGTCTCTCAAGCGGGTGAAATACAACAATCCGCTCTTCTGCCTGGA TGAAGTGGACAAGATGACATCCGACTACCGGGGCGACCCGGCATCGGCCCTGCTGGAAGTGTTGGATCCGGAACAGAACC ATACCTTTATGGACCATTATCTGGACCTGGAATATGACCTGTCCAAGATATTCTTTATCACCACGGCCAACTCGCTGCAC ACCATTCCCGTGCCTTTGCTGGACCGCATGGAGATAATAGAGCTGAACAGCTACCTTGAAACAGAAAAGCGCCATATCGC GCGACACTTTCTGCTGCCCCGCCAGATAGAAGAGCACGGACTCAAGGAGAGCAACATCCGGGTTTCGGATAATGCCGTTC TTGAGATCATCCGTTCCTATACCCGCGAGGCGGGCGTGCGTAACCTTGAGCGCGAAATTGCGGCCCTGTGCCGTAAAACA GCCATCAAGCTGGTGGAAGAGGAAAATCTGGACAAATGCGTGAACATCTCGTGCCAGAGTCTGCCCTCCATGCTTGGCGT CAAAAAATACCGGCATGACGAGCGCGAGGCTGAACCGCAGGTGGGCGTGTGCGCCGGGCTTGCCTACAATCAGCGCGGCG GCGAAATTCTGCTGGTGGAAACAACGCTCATGGCCGGTTCTGGTCAGGTGGTGACCACTGGCAAACTTGGTGAGGTCATG ACTGAATCGGCCAAGGCCGCGCTTTCCTATGTGCGCTCGCGGGCCGAGGTGCTGGGGCTTGACCCGCGCTTCCACCGCAA GGTGGATATTCATGTGCATGTACCCTCCGGAGCCACGCCCAAGGACGGTCCCTCGGCAGGCATTACCCTTGCCACGTCAA TTACCTCGGCCTTGCTGGGCATTCCGGTTCGCAACGATGTGGCCATGACGGGCGAGATATCCTTGCGGGGCCGTGTGCTG CCCATTGGCGGCCTGCGCGAGAAACTGCTGGCCGCGCGGCGCAGCGGCATCAAAAAAGTGCTTATGCCTCGCGACAATGA AAAAGACCTCAAGGAAGTGCCGGACGAGGTGCTGAAAGACCTTGAAATTGTTTTTGTGGATCATGTGGATGAAGTGCTGC CCCATGCCCTGGATGCCGGTGTGGAGGAAATATTCTCCGGCCGGGCCACGGCGCAGCCCATCTGCCGTATCCTGCGGCCC GAAAAGCATGGCGAAGAAGACAAAAAACAGCCCGCCCAATAA
Upstream 100 bases:
>100_bases ACGCGGCGACAGAGTGTAACCCGTCTTTACCGTAATCCGCTCTAATCTCCCAAGCTATGGGGCCGTGCCAATGCGGCCCA CGGCCTTTCAGGGGAAAACT
Downstream 100 bases:
>100_bases AATCACTTTGGCAACGGCAGAGCATACCTGAAAAGCCCGCGTAAGCGGGCTTTTCAGGTTATGGTTTTAGAGCAATTTCT GACGGCTGCGTGAGCGAACG
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 813; Mature: 812
Protein sequence:
>813_residues MTESVRGTGKLVELPVMPLREVVMFPRSIMPLFVGREASIKAIEAAQASYSKQIFLVAQLEPELEKPEAGDLAPVGVVSK VLQMLRLPDGTIKVLFEGMYRADWEDMHENEQCAVVRAARRGEAQSRPEEREALVRAVHEALEEFAKGNKKLSQESVLSM MALHEPGPLADSIIPNLKVDYRKKQQALEMDDVTERLELAYELLHGEVALATVEKRIKNRVKVQMERNQREYYLNEQIKA INKEMGRDDDPQAEVDEIEQKLKARDMPEEARQKALGEAKKLRSMPPSAAEYTVVRNYVDWILDLPWNDLKQVDINIEKA RNILDGDHYGLEKPKERILEYLAVQKLSQGLKGPILCFVGPPGVGKTSLARSVAKATGRDFVRLSLGGVRDEAEIRGHRR TYVGALPGKIIQSLKRVKYNNPLFCLDEVDKMTSDYRGDPASALLEVLDPEQNHTFMDHYLDLEYDLSKIFFITTANSLH TIPVPLLDRMEIIELNSYLETEKRHIARHFLLPRQIEEHGLKESNIRVSDNAVLEIIRSYTREAGVRNLEREIAALCRKT AIKLVEEENLDKCVNISCQSLPSMLGVKKYRHDEREAEPQVGVCAGLAYNQRGGEILLVETTLMAGSGQVVTTGKLGEVM TESAKAALSYVRSRAEVLGLDPRFHRKVDIHVHVPSGATPKDGPSAGITLATSITSALLGIPVRNDVAMTGEISLRGRVL PIGGLREKLLAARRSGIKKVLMPRDNEKDLKEVPDEVLKDLEIVFVDHVDEVLPHALDAGVEEIFSGRATAQPICRILRP EKHGEEDKKQPAQ
Sequences:
>Translated_813_residues MTESVRGTGKLVELPVMPLREVVMFPRSIMPLFVGREASIKAIEAAQASYSKQIFLVAQLEPELEKPEAGDLAPVGVVSK VLQMLRLPDGTIKVLFEGMYRADWEDMHENEQCAVVRAARRGEAQSRPEEREALVRAVHEALEEFAKGNKKLSQESVLSM MALHEPGPLADSIIPNLKVDYRKKQQALEMDDVTERLELAYELLHGEVALATVEKRIKNRVKVQMERNQREYYLNEQIKA INKEMGRDDDPQAEVDEIEQKLKARDMPEEARQKALGEAKKLRSMPPSAAEYTVVRNYVDWILDLPWNDLKQVDINIEKA RNILDGDHYGLEKPKERILEYLAVQKLSQGLKGPILCFVGPPGVGKTSLARSVAKATGRDFVRLSLGGVRDEAEIRGHRR TYVGALPGKIIQSLKRVKYNNPLFCLDEVDKMTSDYRGDPASALLEVLDPEQNHTFMDHYLDLEYDLSKIFFITTANSLH TIPVPLLDRMEIIELNSYLETEKRHIARHFLLPRQIEEHGLKESNIRVSDNAVLEIIRSYTREAGVRNLEREIAALCRKT AIKLVEEENLDKCVNISCQSLPSMLGVKKYRHDEREAEPQVGVCAGLAYNQRGGEILLVETTLMAGSGQVVTTGKLGEVM TESAKAALSYVRSRAEVLGLDPRFHRKVDIHVHVPSGATPKDGPSAGITLATSITSALLGIPVRNDVAMTGEISLRGRVL PIGGLREKLLAARRSGIKKVLMPRDNEKDLKEVPDEVLKDLEIVFVDHVDEVLPHALDAGVEEIFSGRATAQPICRILRP EKHGEEDKKQPAQ >Mature_812_residues TESVRGTGKLVELPVMPLREVVMFPRSIMPLFVGREASIKAIEAAQASYSKQIFLVAQLEPELEKPEAGDLAPVGVVSKV LQMLRLPDGTIKVLFEGMYRADWEDMHENEQCAVVRAARRGEAQSRPEEREALVRAVHEALEEFAKGNKKLSQESVLSMM ALHEPGPLADSIIPNLKVDYRKKQQALEMDDVTERLELAYELLHGEVALATVEKRIKNRVKVQMERNQREYYLNEQIKAI NKEMGRDDDPQAEVDEIEQKLKARDMPEEARQKALGEAKKLRSMPPSAAEYTVVRNYVDWILDLPWNDLKQVDINIEKAR NILDGDHYGLEKPKERILEYLAVQKLSQGLKGPILCFVGPPGVGKTSLARSVAKATGRDFVRLSLGGVRDEAEIRGHRRT YVGALPGKIIQSLKRVKYNNPLFCLDEVDKMTSDYRGDPASALLEVLDPEQNHTFMDHYLDLEYDLSKIFFITTANSLHT IPVPLLDRMEIIELNSYLETEKRHIARHFLLPRQIEEHGLKESNIRVSDNAVLEIIRSYTREAGVRNLEREIAALCRKTA IKLVEEENLDKCVNISCQSLPSMLGVKKYRHDEREAEPQVGVCAGLAYNQRGGEILLVETTLMAGSGQVVTTGKLGEVMT ESAKAALSYVRSRAEVLGLDPRFHRKVDIHVHVPSGATPKDGPSAGITLATSITSALLGIPVRNDVAMTGEISLRGRVLP IGGLREKLLAARRSGIKKVLMPRDNEKDLKEVPDEVLKDLEIVFVDHVDEVLPHALDAGVEEIFSGRATAQPICRILRPE KHGEEDKKQPAQ
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=566, Percent_Identity=48.5865724381625, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI21396489, Length=664, Percent_Identity=40.6626506024096, Blast_Score=503, Evalue=1e-142, Organism=Escherichia coli, GI1786643, Length=766, Percent_Identity=54.0469973890339, Blast_Score=814, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=693, Percent_Identity=39.3939393939394, Blast_Score=496, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17556486, Length=789, Percent_Identity=34.6007604562738, Blast_Score=478, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6319449, Length=669, Percent_Identity=39.4618834080717, Blast_Score=489, Evalue=1e-139, Organism=Drosophila melanogaster, GI24666867, Length=627, Percent_Identity=44.6570972886762, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI221513036, Length=627, Percent_Identity=44.6570972886762, Blast_Score=531, Evalue=1e-151,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 91148; Mature: 91017
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESVRGTGKLVELPVMPLREVVMFPRSIMPLFVGREASIKAIEAAQASYSKQIFLVAQL CCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEC EPELEKPEAGDLAPVGVVSKVLQMLRLPDGTIKVLFEGMYRADWEDMHENEQCAVVRAAR CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH RGEAQSRPEEREALVRAVHEALEEFAKGNKKLSQESVLSMMALHEPGPLADSIIPNLKVD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCH YRKKQQALEMDDVTERLELAYELLHGEVALATVEKRIKNRVKVQMERNQREYYLNEQIKA HHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHH INKEMGRDDDPQAEVDEIEQKLKARDMPEEARQKALGEAKKLRSMPPSAAEYTVVRNYVD HHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WILDLPWNDLKQVDINIEKARNILDGDHYGLEKPKERILEYLAVQKLSQGLKGPILCFVG HHHCCCCCCHHEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC PPGVGKTSLARSVAKATGRDFVRLSLGGVRDEAEIRGHRRTYVGALPGKIIQSLKRVKYN CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHCCC NPLFCLDEVDKMTSDYRGDPASALLEVLDPEQNHTFMDHYLDLEYDLSKIFFITTANSLH CCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCEECCCEEEEEEECCCCE TIPVPLLDRMEIIELNSYLETEKRHIARHFLLPRQIEEHGLKESNIRVSDNAVLEIIRSY ECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHH TREAGVRNLEREIAALCRKTAIKLVEEENLDKCVNISCQSLPSMLGVKKYRHDEREAEPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCC VGVCAGLAYNQRGGEILLVETTLMAGSGQVVTTGKLGEVMTESAKAALSYVRSRAEVLGL CEEHCCEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC DPRFHRKVDIHVHVPSGATPKDGPSAGITLATSITSALLGIPVRNDVAMTGEISLRGRVL CCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEEECCEEE PIGGLREKLLAARRSGIKKVLMPRDNEKDLKEVPDEVLKDLEIVFVDHVDEVLPHALDAG ECCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEIFSGRATAQPICRILRPEKHGEEDKKQPAQ HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TESVRGTGKLVELPVMPLREVVMFPRSIMPLFVGREASIKAIEAAQASYSKQIFLVAQL CCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEC EPELEKPEAGDLAPVGVVSKVLQMLRLPDGTIKVLFEGMYRADWEDMHENEQCAVVRAAR CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHH RGEAQSRPEEREALVRAVHEALEEFAKGNKKLSQESVLSMMALHEPGPLADSIIPNLKVD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCH YRKKQQALEMDDVTERLELAYELLHGEVALATVEKRIKNRVKVQMERNQREYYLNEQIKA HHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHH INKEMGRDDDPQAEVDEIEQKLKARDMPEEARQKALGEAKKLRSMPPSAAEYTVVRNYVD HHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WILDLPWNDLKQVDINIEKARNILDGDHYGLEKPKERILEYLAVQKLSQGLKGPILCFVG HHHCCCCCCHHEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC PPGVGKTSLARSVAKATGRDFVRLSLGGVRDEAEIRGHRRTYVGALPGKIIQSLKRVKYN CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHCCC NPLFCLDEVDKMTSDYRGDPASALLEVLDPEQNHTFMDHYLDLEYDLSKIFFITTANSLH CCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCEECCCEEEEEEECCCCE TIPVPLLDRMEIIELNSYLETEKRHIARHFLLPRQIEEHGLKESNIRVSDNAVLEIIRSY ECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHHHH TREAGVRNLEREIAALCRKTAIKLVEEENLDKCVNISCQSLPSMLGVKKYRHDEREAEPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCC VGVCAGLAYNQRGGEILLVETTLMAGSGQVVTTGKLGEVMTESAKAALSYVRSRAEVLGL CEEHCCEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC DPRFHRKVDIHVHVPSGATPKDGPSAGITLATSITSALLGIPVRNDVAMTGEISLRGRVL CCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEEECCEEE PIGGLREKLLAARRSGIKKVLMPRDNEKDLKEVPDEVLKDLEIVFVDHVDEVLPHALDAG ECCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEIFSGRATAQPICRILRPEKHGEEDKKQPAQ HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA