| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is feoB1 [H]
Identifier: 220903921
GI number: 220903921
Start: 783159
End: 785639
Strand: Direct
Name: feoB1 [H]
Synonym: Ddes_0646
Alternate gene names: 220903921
Gene position: 783159-785639 (Clockwise)
Preceding gene: 220903920
Following gene: 220903922
Centisome position: 27.26
GC content: 58.4
Gene sequence:
>2481_bases ATGAGTTCTCCCCTGCTAGTGGCTCTGGCCGGGCAGCCCAATTGCGGCAAGTCCACACTGTTCAACATGCTTACCGGGGC GCGCCAGCACGTGGCCAACTACCCCGGAGTTACCGTTGAGAAAAAGACAGGATATTTTGACCTCGGCGGCCGCAAGGTAG AGCTTGTGGACCTGCCGGGAACCTACAGCCTCACCTCCTATTCGCTGGAAGAAAAAGTGGCGCGTGATTTCATCCTTGAA GCTTCGCCCCAGGTCACCATCAACGTGGCCGACGCGGCCAACCTCAAGCGTCATCTTTACCTGACCCTGCAACTGCTGGA AATGGAAGCGCCGCTCGTACTGGCCCTTAACATGATGGATGTGGCCGAACGGCGCTCTATCAAGGTTGATGTGGATGGGC TGGCCAACGAGCTGGGCATTGCCGTTGTACCCACGGTGGGTAAAAAGAGCAGCGGCGTGCAGGCATTGCGCGCGGCCCTG ACCACCGCAGGGGAGGGCGGGCCGAGGTCTGCGTTTGCCGTGAATTACGGCCCCATGGAGCCGTATCTTGCCGATCTTGC TGCCCTGCTTGCCAATGAGGAAGCCCTGGCCGGACTGCCCCTGCGCTGGCTTGCTGTGAAGCTTATGGAGAATGACGAAG CCGCCATTGCCCTGGTGCAGAAGCGCTGCGCAGAGGGGGCCGGCATTCCGGCCAGGGTGTTCGCCATGCGCGAGAGCTTT GCCGCGCAGGGCGTCAATGCCGAAAGGCATGTAGCCTTTGCCCGCCACCGCACGGCCGCGGCTCTGGCTTCGCGGCATGT GACCCTGCCCGCGCAGGGAACCACAAGCCTTTCCGACAAGGCTGACAGGTTTGTCTGCCACAGGTTTTTCGGCCCGGTGA TTCTGCTCGCCATTCTGCTCATCCTGTATCAGGTATCCATCGTTTTTGGCGGGGATGTGGCGGCCATGATCTGGCCCCTG TGGGACAATGCCCAGAATGCCCTGGCGGGACTTTTGCCCGCATCCGGCTTTCTGGAAGATCCTCTTCTGCGTTCCCTGGG CGTGTGGGTTATGCGCAGTGTTACGGCCATTCTTAACTATCTGCCCATATTCTTTCTGCTTTTTTCCCTTATCGCTATTC TTGAAGACAGCGGATACATGCCGCGTATGGCCTTTATTCTTGACCGCGCCTTTCGCCGTTTCGGCTTGCACGGCCAGTCC ACGCTGCCGCTTATTCTCGGCGGCGTATATGTGGGCGGCTGCGCCATCCCCGCAGTCATGGCGACCAGGGCGATTCCGGA CGAGAAAGCCCGCCTGGCTACCATTCTTATCGCACCAATGATGAACTGCCTGGCCAAGGTGCCGCTGTATCTCATACTGA TCAGCGCCTACTTTGCCGCCAACAGCGGCATGGCCATGTTCTTTATTGCCACCATTACCCTGTTTATGGCCCTTCCTGTG TCAAAGGCCCTTTCGCTTACCCTGTTGCGGGGGAAACCCAGTGCGCCCTTTATTATGGAGATGCCGCCCTATCACCTGCC CACCATCAGGGGAGTACTTGCGCGCGCCATCGAGCGGGTGTGGATTTTCATCCGCAAGATTTTCACCGTGGTGCTGGCTG TGGCCGTGGTTATTTTTGCGCTCATCAATTTTCCCGGTCTTGGGGAAGAGCGCATGGCCGTGTACGAAAAAAAATCCACA AAAGCCATGAGCGATTTTGTCAAGGCTGTGGACAAGACCGCGCTGGCCGGGCAGTTCACCCTGGATGACGTAACGCCTCT GCTGCTTTTTGAAGAAGACCTCAAGGATGCCAAACGCAGCGTGACAGATCAGGAAGCCTCAAACAAGATTGATGCGGTTT TTCAGGAAAAAAGCCCGATCTACTTCACCATAGTGCGCGCTGTGGGGGCGGACGGCAAAGCCCTGCGCCCGGCGCTGCGC AAGCTCATCAGTGCGCGCAAGCAGCTGCGTCGTGAACTGCGCGAAGAAACCTTCGAGCACAGCGCCCTTGGTATTGCGGG CAAGGCTCTGGAACCGGTGACGCAGTATGCCGGCTTTAACTGGAAGATCAATATTGCCCTGCTTTCGGCCTTTGCGGCCA AAGAAAACAGCGCCGCCACCCTCGGGGCCATTTACGGGCTTGATGGCGATGCGCCTGTGCAGGACAGCATGCGTGAAGAC GCTACCGGCTTTACCCCGTTGCATGCCCTTGCGCTCATGCTGTTCATGGCCCTGTATCCGCCCTGCGTGCCCACCTCCGT TATGGTGCGGCTGCAATCCAATTCCACGGGCTGGATGCTTTTTTCCATCATCTATCAAACCTGCCTGGGGCTGGCGGTGG CCGTTCTTGTGTTCACCGGCGGGACGTTACTGGGGCTTTCTGGCTGGCAGGCCATGTGGATATTCTACGGCCTGTGCGTG GCGCTCACCATCGTTATGGGGATGATACCCGAGCCTGAAAGCAGAAAAAAGGTGGACGCTAAAAAGCCGGTGACGGCATA A
Upstream 100 bases:
>100_bases TACGCAACGCGCCGCTTGTGGATCCTGTGGAAATTGAGCTGGACGGTTACCACGTCAGTCTGCGTCATGACGAAGCTGAT CTTGTGGAGGTTGACGGCCA
Downstream 100 bases:
>100_bases CATCTTAAGGAGGATCTGATGAAAAATCTCTTTCTGGCCGCAGTGCTCGGCCTGACCATGCTCTTCGCTACCGCCGCCAT GGCGCACAGCCCCCTGTGCA
Product: small GTP-binding protein
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 825
Protein sequence:
>826_residues MSSPLLVALAGQPNCGKSTLFNMLTGARQHVANYPGVTVEKKTGYFDLGGRKVELVDLPGTYSLTSYSLEEKVARDFILE ASPQVTINVADAANLKRHLYLTLQLLEMEAPLVLALNMMDVAERRSIKVDVDGLANELGIAVVPTVGKKSSGVQALRAAL TTAGEGGPRSAFAVNYGPMEPYLADLAALLANEEALAGLPLRWLAVKLMENDEAAIALVQKRCAEGAGIPARVFAMRESF AAQGVNAERHVAFARHRTAAALASRHVTLPAQGTTSLSDKADRFVCHRFFGPVILLAILLILYQVSIVFGGDVAAMIWPL WDNAQNALAGLLPASGFLEDPLLRSLGVWVMRSVTAILNYLPIFFLLFSLIAILEDSGYMPRMAFILDRAFRRFGLHGQS TLPLILGGVYVGGCAIPAVMATRAIPDEKARLATILIAPMMNCLAKVPLYLILISAYFAANSGMAMFFIATITLFMALPV SKALSLTLLRGKPSAPFIMEMPPYHLPTIRGVLARAIERVWIFIRKIFTVVLAVAVVIFALINFPGLGEERMAVYEKKST KAMSDFVKAVDKTALAGQFTLDDVTPLLLFEEDLKDAKRSVTDQEASNKIDAVFQEKSPIYFTIVRAVGADGKALRPALR KLISARKQLRRELREETFEHSALGIAGKALEPVTQYAGFNWKINIALLSAFAAKENSAATLGAIYGLDGDAPVQDSMRED ATGFTPLHALALMLFMALYPPCVPTSVMVRLQSNSTGWMLFSIIYQTCLGLAVAVLVFTGGTLLGLSGWQAMWIFYGLCV ALTIVMGMIPEPESRKKVDAKKPVTA
Sequences:
>Translated_826_residues MSSPLLVALAGQPNCGKSTLFNMLTGARQHVANYPGVTVEKKTGYFDLGGRKVELVDLPGTYSLTSYSLEEKVARDFILE ASPQVTINVADAANLKRHLYLTLQLLEMEAPLVLALNMMDVAERRSIKVDVDGLANELGIAVVPTVGKKSSGVQALRAAL TTAGEGGPRSAFAVNYGPMEPYLADLAALLANEEALAGLPLRWLAVKLMENDEAAIALVQKRCAEGAGIPARVFAMRESF AAQGVNAERHVAFARHRTAAALASRHVTLPAQGTTSLSDKADRFVCHRFFGPVILLAILLILYQVSIVFGGDVAAMIWPL WDNAQNALAGLLPASGFLEDPLLRSLGVWVMRSVTAILNYLPIFFLLFSLIAILEDSGYMPRMAFILDRAFRRFGLHGQS TLPLILGGVYVGGCAIPAVMATRAIPDEKARLATILIAPMMNCLAKVPLYLILISAYFAANSGMAMFFIATITLFMALPV SKALSLTLLRGKPSAPFIMEMPPYHLPTIRGVLARAIERVWIFIRKIFTVVLAVAVVIFALINFPGLGEERMAVYEKKST KAMSDFVKAVDKTALAGQFTLDDVTPLLLFEEDLKDAKRSVTDQEASNKIDAVFQEKSPIYFTIVRAVGADGKALRPALR KLISARKQLRRELREETFEHSALGIAGKALEPVTQYAGFNWKINIALLSAFAAKENSAATLGAIYGLDGDAPVQDSMRED ATGFTPLHALALMLFMALYPPCVPTSVMVRLQSNSTGWMLFSIIYQTCLGLAVAVLVFTGGTLLGLSGWQAMWIFYGLCV ALTIVMGMIPEPESRKKVDAKKPVTA >Mature_825_residues SSPLLVALAGQPNCGKSTLFNMLTGARQHVANYPGVTVEKKTGYFDLGGRKVELVDLPGTYSLTSYSLEEKVARDFILEA SPQVTINVADAANLKRHLYLTLQLLEMEAPLVLALNMMDVAERRSIKVDVDGLANELGIAVVPTVGKKSSGVQALRAALT TAGEGGPRSAFAVNYGPMEPYLADLAALLANEEALAGLPLRWLAVKLMENDEAAIALVQKRCAEGAGIPARVFAMRESFA AQGVNAERHVAFARHRTAAALASRHVTLPAQGTTSLSDKADRFVCHRFFGPVILLAILLILYQVSIVFGGDVAAMIWPLW DNAQNALAGLLPASGFLEDPLLRSLGVWVMRSVTAILNYLPIFFLLFSLIAILEDSGYMPRMAFILDRAFRRFGLHGQST LPLILGGVYVGGCAIPAVMATRAIPDEKARLATILIAPMMNCLAKVPLYLILISAYFAANSGMAMFFIATITLFMALPVS KALSLTLLRGKPSAPFIMEMPPYHLPTIRGVLARAIERVWIFIRKIFTVVLAVAVVIFALINFPGLGEERMAVYEKKSTK AMSDFVKAVDKTALAGQFTLDDVTPLLLFEEDLKDAKRSVTDQEASNKIDAVFQEKSPIYFTIVRAVGADGKALRPALRK LISARKQLRRELREETFEHSALGIAGKALEPVTQYAGFNWKINIALLSAFAAKENSAATLGAIYGLDGDAPVQDSMREDA TGFTPLHALALMLFMALYPPCVPTSVMVRLQSNSTGWMLFSIIYQTCLGLAVAVLVFTGGTLLGLSGWQAMWIFYGLCVA LTIVMGMIPEPESRKKVDAKKPVTA
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=560, Percent_Identity=33.3928571428571, Blast_Score=268, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 89525; Mature: 89393
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLLVALAGQPNCGKSTLFNMLTGARQHVANYPGVTVEKKTGYFDLGGRKVELVDLPG CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEEEEEECCC TYSLTSYSLEEKVARDFILEASPQVTINVADAANLKRHLYLTLQLLEMEAPLVLALNMMD CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCHHHHEEEEHHHHHCCCHHEEEHHHH VAERRSIKVDVDGLANELGIAVVPTVGKKSSGVQALRAALTTAGEGGPRSAFAVNYGPME HHHHCCEEEEHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC PYLADLAALLANEEALAGLPLRWLAVKLMENDEAAIALVQKRCAEGAGIPARVFAMRESF HHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH AAQGVNAERHVAFARHRTAAALASRHVTLPAQGTTSLSDKADRFVCHRFFGPVILLAILL HHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILYQVSIVFGGDVAAMIWPLWDNAQNALAGLLPASGFLEDPLLRSLGVWVMRSVTAILNY HHHHHHHHCCCCHHHHEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LPIFFLLFSLIAILEDSGYMPRMAFILDRAFRRFGLHGQSTLPLILGGVYVGGCAIPAVM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ATRAIPDEKARLATILIAPMMNCLAKVPLYLILISAYFAANSGMAMFFIATITLFMALPV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SKALSLTLLRGKPSAPFIMEMPPYHLPTIRGVLARAIERVWIFIRKIFTVVLAVAVVIFA HHHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINFPGLGEERMAVYEKKSTKAMSDFVKAVDKTALAGQFTLDDVTPLLLFEEDLKDAKRS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH VTDQEASNKIDAVFQEKSPIYFTIVRAVGADGKALRPALRKLISARKQLRRELREETFEH CCHHHHCCHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGIAGKALEPVTQYAGFNWKINIALLSAFAAKENSAATLGAIYGLDGDAPVQDSMRED HHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEEHEEECCCCCCCCHHHHHHC ATGFTPLHALALMLFMALYPPCVPTSVMVRLQSNSTGWMLFSIIYQTCLGLAVAVLVFTG CCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC GTLLGLSGWQAMWIFYGLCVALTIVMGMIPEPESRKKVDAKKPVTA CHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSPLLVALAGQPNCGKSTLFNMLTGARQHVANYPGVTVEKKTGYFDLGGRKVELVDLPG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEEEEEECCC TYSLTSYSLEEKVARDFILEASPQVTINVADAANLKRHLYLTLQLLEMEAPLVLALNMMD CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCHHHHEEEEHHHHHCCCHHEEEHHHH VAERRSIKVDVDGLANELGIAVVPTVGKKSSGVQALRAALTTAGEGGPRSAFAVNYGPME HHHHCCEEEEHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC PYLADLAALLANEEALAGLPLRWLAVKLMENDEAAIALVQKRCAEGAGIPARVFAMRESF HHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH AAQGVNAERHVAFARHRTAAALASRHVTLPAQGTTSLSDKADRFVCHRFFGPVILLAILL HHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILYQVSIVFGGDVAAMIWPLWDNAQNALAGLLPASGFLEDPLLRSLGVWVMRSVTAILNY HHHHHHHHCCCCHHHHEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LPIFFLLFSLIAILEDSGYMPRMAFILDRAFRRFGLHGQSTLPLILGGVYVGGCAIPAVM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ATRAIPDEKARLATILIAPMMNCLAKVPLYLILISAYFAANSGMAMFFIATITLFMALPV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SKALSLTLLRGKPSAPFIMEMPPYHLPTIRGVLARAIERVWIFIRKIFTVVLAVAVVIFA HHHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINFPGLGEERMAVYEKKSTKAMSDFVKAVDKTALAGQFTLDDVTPLLLFEEDLKDAKRS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHH VTDQEASNKIDAVFQEKSPIYFTIVRAVGADGKALRPALRKLISARKQLRRELREETFEH CCHHHHCCHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGIAGKALEPVTQYAGFNWKINIALLSAFAAKENSAATLGAIYGLDGDAPVQDSMRED HHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCEEEHEEECCCCCCCCHHHHHHC ATGFTPLHALALMLFMALYPPCVPTSVMVRLQSNSTGWMLFSIIYQTCLGLAVAVLVFTG CCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC GTLLGLSGWQAMWIFYGLCVALTIVMGMIPEPESRKKVDAKKPVTA CHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]