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The map label for this gene is omp85 [H]

Identifier: 220903886

GI number: 220903886

Start: 738278

End: 741040

Strand: Reverse

Name: omp85 [H]

Synonym: Ddes_0611

Alternate gene names: 220903886

Gene position: 741040-738278 (Counterclockwise)

Preceding gene: 220903887

Following gene: 220903885

Centisome position: 25.79

GC content: 59.43

Gene sequence:

>2763_bases
ATGAAAAAAATCTTGCGTAATATCCTGTCTAACATTCTTTGCGTCACCGCTCTGGTATGCGCCGTCCAGCTTATGCCCCG
CGAGGCCGGCGCGTCACAGGGGCCTCTTGTTCTGGTGCTGCCCTTTCAGGTAAATGCCGGACCGGAAATGCCCAATGCCG
CTCAGGACGTACCCCAGATCATCGCTGACCAGCTCAAGCAAAGCGGCATGCGCGTTGTGCCTATGAATACGGCGCGGCAA
CTGCAACGCAGCAGCGGTGAAACCATTGACCTTGCCACGGCGCGCGCCCTGGGCCGTCAGGCCGGAGCGCAGCTTGTCAT
TTACGGCAGCTTCAACCAGCTTGGCGACGGCTTCAACATGGATACGCGCCTTGTGCCCGTGCAGCAGGGCGAAGCCGTAC
CCGCAGGTTTTGAGCGCAACTCGCTCGTAGCCCTCAGCGACTGCGCCAGCACCCTGGCCGGACGCGCTGCGGAACTCACG
GGAGCCAGCGCTGCCCCCGCCGCCCCGCAGTCCGGCGACGACGGCCCCGGCCTTGTGCCCATGGGTACGCCCACGGCGGC
CAAGGGCGGCCTGGCCGATGTACAGGTTCGCGGCATGAGCGTTATGGATCCGGATACCGTACTCATGCGCCTGACCATCC
GCAAAGGTGATACCCCCGATGCCCACGCCATCAACGAGGAAGTGAAGCGCATCTGGGAAATGGGATATTTCAGCGATGTG
CAGGCCAGCCTTGAAGGCAACGTGCTGGTCTTCACCGTGGTGGAAAAACCCCGCATCGACAACATCATTGTCGAAGGGTC
CAAAGGTGTGGACCAGGAAGACGTCATTGCCGCCATGGGCACAAGAACCGGTAACGTGCTCAACGAGCAGGTGCTTTCCG
ACGACCTGCAAAAAATTACCGAACTGTACCGCAAGGAAGGCTATTACCTTGCCAAGGTCAATTACCGTCTTGAAGACCGC
CAGAGCGGGCGCGGTGCAGTGCTGGTCATCAATGTGGACGAGGGCAACAAGCTCTACGTCAAAGAAGTGAACATCGAGGG
CCTCAACAAGCTCAGCCGGGGCGACCTTGACAAATACCTTGCCCTCAAGCCGCGGGGCATTTTCTCCTGGCTCACCGGCT
CGGGCGTGCTCAAAGAGGAATACCTCGAGCGCGATACCAACGCCATTGCGGCCTACGGCCTCAATGAAGGCTACATCGAC
ATCCAGGTCGGCGCACCTCAGGTAGACTACAAGGACGATGGCATCTACGTCACCTTTGTGGTCAACGAAGGTCCCCGTTA
TACCGTGCGCAACGTGGTCTTTGCCGGAGACGTCATCGACAGCGAAGACAATATGCTCGAAGTGGTGCAGATGGATGACT
GGAAAAAGTCCAATGACTACTTCTCCCTGACGGTCATGCAGGAAGACTCCAAGCGCCTGACAGACCACTACGCCGACTAC
GGTTACGCCTTCGCCGAGGTGGACACCAAGCTCATCAAGGCAGAAGACGGCAGCGACCAGGTGGACGTAGGCTACCTGAT
CAACAAAAAGCAGAAGGTCTTCATCCGCCGCCTGGTGGTTGAAGGCAATACCAAAACGCGCGACAACGTCATCCTGCGCG
AAATGCGCCTGGGCGACGGCGACATGTATGAAGGGGCCAAACTGCGCCGCTCCAACGAACGCCTGAACCGCCTGCGGTAC
TTCTCTGTCGTGGATATGGAACTTATCCCCACCGGGCAGGAAGACGAAGTGGACCTCAAGGTCAAGGTCAAGGAAACCAA
TACCGGCGCCATCATGGGCGGTATCGGCTACTCCAGCTACTATGACGTGGGCGTCACGGCCTCCATTATGGAGCGCAACC
TCTTCGGCCGCGGCTACTGGCTGCAGCTCCAGGGCTTCTTCTCCTGGCGGCGCACATCGGGAACCCTGTCCTTCACCAAC
CCGCGTGTGTACGATACCGACCTTTCGTTCGGCAACGACATCTATTACACCCACGACTACTGGGACAACTTCACCAAGGA
TACCATAGGCGACACCGTGCGCTTCGGCTACCCCATCGGCGAGTACACGTCCGTGGGCGTGGGCTATCGCCTTGAGCGCT
ACCACCTGTACGATGTGGCTGACAACAGCTCGCCCTACATCAAGGACTACAAGGGCATCAACTGGACCAGTGCCGTTTCG
GGCCGCATCCTGCGCGATACCACCGACAGCAAGGAACGCCCCACCAAGGGAACCATCGCCCGCCTGTGGGCTGAATACGG
CGGCGGCGGCCTTGGCGGTACAGACAACTTCGTCAAGAGCGTGGCCGACTGGCAGGGTTTCTGGTCCTTCAACCCGCAAA
ACACTGTCCACCTGCGTGGACGCGTGGGCGGTGTGTTCCAGAACACCAGTGACAGGGTCCCCGTGTTTGAACGCTTCTGG
GTCGGCGGCATGGACACCATCCGCGGCTACAGCTACTCCGACCTTTCGCCCCGCGACTACAAGCACGGCAACGAACAGAT
CGGCGGCGACCGCATGGCTGTCGGCAACCTGGAGTACATCTGGACATTCCAGAAAGACCTGGGGCTTGCTCTGGTACCCT
TTGTGGACACCGGCTTCAACATTGACTCCAAGACCATGGGCGACGAATGGGACAGATACATCGTCGCCTCTACCGGCCTG
GAGCTGCGCTGGCGCTCTCCCATGGGCGACCTGCGCATAGCTTACGGCATCCCCCTGGTGCAGGATTACGATAAGGAAAT
GCCTCCGGGCAGAATCGAATTCAGCATGGGGCAGTTCTTTTAG

Upstream 100 bases:

>100_bases
CTTAACCGCGAGCTGGGCATGACTCTCGTGGTCGTGACGCATAATCGGGAACTGGCCGCGGGTATGGGCCGCATCCTGGA
ACTGAAAGCGGGGACACTGT

Downstream 100 bases:

>100_bases
GCCGGGTTTGAGCCGGACTTGGAGCCATCCCCTGGACGGTATCCGGAATAGATGAACAGTATGCCCACACGGCTTGCAGC
CGTTCAGACGTAATATCCAC

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 920; Mature: 920

Protein sequence:

>920_residues
MKKILRNILSNILCVTALVCAVQLMPREAGASQGPLVLVLPFQVNAGPEMPNAAQDVPQIIADQLKQSGMRVVPMNTARQ
LQRSSGETIDLATARALGRQAGAQLVIYGSFNQLGDGFNMDTRLVPVQQGEAVPAGFERNSLVALSDCASTLAGRAAELT
GASAAPAAPQSGDDGPGLVPMGTPTAAKGGLADVQVRGMSVMDPDTVLMRLTIRKGDTPDAHAINEEVKRIWEMGYFSDV
QASLEGNVLVFTVVEKPRIDNIIVEGSKGVDQEDVIAAMGTRTGNVLNEQVLSDDLQKITELYRKEGYYLAKVNYRLEDR
QSGRGAVLVINVDEGNKLYVKEVNIEGLNKLSRGDLDKYLALKPRGIFSWLTGSGVLKEEYLERDTNAIAAYGLNEGYID
IQVGAPQVDYKDDGIYVTFVVNEGPRYTVRNVVFAGDVIDSEDNMLEVVQMDDWKKSNDYFSLTVMQEDSKRLTDHYADY
GYAFAEVDTKLIKAEDGSDQVDVGYLINKKQKVFIRRLVVEGNTKTRDNVILREMRLGDGDMYEGAKLRRSNERLNRLRY
FSVVDMELIPTGQEDEVDLKVKVKETNTGAIMGGIGYSSYYDVGVTASIMERNLFGRGYWLQLQGFFSWRRTSGTLSFTN
PRVYDTDLSFGNDIYYTHDYWDNFTKDTIGDTVRFGYPIGEYTSVGVGYRLERYHLYDVADNSSPYIKDYKGINWTSAVS
GRILRDTTDSKERPTKGTIARLWAEYGGGGLGGTDNFVKSVADWQGFWSFNPQNTVHLRGRVGGVFQNTSDRVPVFERFW
VGGMDTIRGYSYSDLSPRDYKHGNEQIGGDRMAVGNLEYIWTFQKDLGLALVPFVDTGFNIDSKTMGDEWDRYIVASTGL
ELRWRSPMGDLRIAYGIPLVQDYDKEMPPGRIEFSMGQFF

Sequences:

>Translated_920_residues
MKKILRNILSNILCVTALVCAVQLMPREAGASQGPLVLVLPFQVNAGPEMPNAAQDVPQIIADQLKQSGMRVVPMNTARQ
LQRSSGETIDLATARALGRQAGAQLVIYGSFNQLGDGFNMDTRLVPVQQGEAVPAGFERNSLVALSDCASTLAGRAAELT
GASAAPAAPQSGDDGPGLVPMGTPTAAKGGLADVQVRGMSVMDPDTVLMRLTIRKGDTPDAHAINEEVKRIWEMGYFSDV
QASLEGNVLVFTVVEKPRIDNIIVEGSKGVDQEDVIAAMGTRTGNVLNEQVLSDDLQKITELYRKEGYYLAKVNYRLEDR
QSGRGAVLVINVDEGNKLYVKEVNIEGLNKLSRGDLDKYLALKPRGIFSWLTGSGVLKEEYLERDTNAIAAYGLNEGYID
IQVGAPQVDYKDDGIYVTFVVNEGPRYTVRNVVFAGDVIDSEDNMLEVVQMDDWKKSNDYFSLTVMQEDSKRLTDHYADY
GYAFAEVDTKLIKAEDGSDQVDVGYLINKKQKVFIRRLVVEGNTKTRDNVILREMRLGDGDMYEGAKLRRSNERLNRLRY
FSVVDMELIPTGQEDEVDLKVKVKETNTGAIMGGIGYSSYYDVGVTASIMERNLFGRGYWLQLQGFFSWRRTSGTLSFTN
PRVYDTDLSFGNDIYYTHDYWDNFTKDTIGDTVRFGYPIGEYTSVGVGYRLERYHLYDVADNSSPYIKDYKGINWTSAVS
GRILRDTTDSKERPTKGTIARLWAEYGGGGLGGTDNFVKSVADWQGFWSFNPQNTVHLRGRVGGVFQNTSDRVPVFERFW
VGGMDTIRGYSYSDLSPRDYKHGNEQIGGDRMAVGNLEYIWTFQKDLGLALVPFVDTGFNIDSKTMGDEWDRYIVASTGL
ELRWRSPMGDLRIAYGIPLVQDYDKEMPPGRIEFSMGQFF
>Mature_920_residues
MKKILRNILSNILCVTALVCAVQLMPREAGASQGPLVLVLPFQVNAGPEMPNAAQDVPQIIADQLKQSGMRVVPMNTARQ
LQRSSGETIDLATARALGRQAGAQLVIYGSFNQLGDGFNMDTRLVPVQQGEAVPAGFERNSLVALSDCASTLAGRAAELT
GASAAPAAPQSGDDGPGLVPMGTPTAAKGGLADVQVRGMSVMDPDTVLMRLTIRKGDTPDAHAINEEVKRIWEMGYFSDV
QASLEGNVLVFTVVEKPRIDNIIVEGSKGVDQEDVIAAMGTRTGNVLNEQVLSDDLQKITELYRKEGYYLAKVNYRLEDR
QSGRGAVLVINVDEGNKLYVKEVNIEGLNKLSRGDLDKYLALKPRGIFSWLTGSGVLKEEYLERDTNAIAAYGLNEGYID
IQVGAPQVDYKDDGIYVTFVVNEGPRYTVRNVVFAGDVIDSEDNMLEVVQMDDWKKSNDYFSLTVMQEDSKRLTDHYADY
GYAFAEVDTKLIKAEDGSDQVDVGYLINKKQKVFIRRLVVEGNTKTRDNVILREMRLGDGDMYEGAKLRRSNERLNRLRY
FSVVDMELIPTGQEDEVDLKVKVKETNTGAIMGGIGYSSYYDVGVTASIMERNLFGRGYWLQLQGFFSWRRTSGTLSFTN
PRVYDTDLSFGNDIYYTHDYWDNFTKDTIGDTVRFGYPIGEYTSVGVGYRLERYHLYDVADNSSPYIKDYKGINWTSAVS
GRILRDTTDSKERPTKGTIARLWAEYGGGGLGGTDNFVKSVADWQGFWSFNPQNTVHLRGRVGGVFQNTSDRVPVFERFW
VGGMDTIRGYSYSDLSPRDYKHGNEQIGGDRMAVGNLEYIWTFQKDLGLALVPFVDTGFNIDSKTMGDEWDRYIVASTGL
ELRWRSPMGDLRIAYGIPLVQDYDKEMPPGRIEFSMGQFF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=799, Percent_Identity=25.4067584480601, Blast_Score=205, Evalue=1e-53,
Organism=Escherichia coli, GI1790666, Length=419, Percent_Identity=23.8663484486874, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 102442; Mature: 102442

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILRNILSNILCVTALVCAVQLMPREAGASQGPLVLVLPFQVNAGPEMPNAAQDVPQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
IADQLKQSGMRVVPMNTARQLQRSSGETIDLATARALGRQAGAQLVIYGSFNQLGDGFNM
HHHHHHHCCCEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEEECHHHCCCCCCC
DTRLVPVQQGEAVPAGFERNSLVALSDCASTLAGRAAELTGASAAPAAPQSGDDGPGLVP
CEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCEEE
MGTPTAAKGGLADVQVRGMSVMDPDTVLMRLTIRKGDTPDAHAINEEVKRIWEMGYFSDV
CCCCCCCCCCCCEEEECCEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHH
QASLEGNVLVFTVVEKPRIDNIIVEGSKGVDQEDVIAAMGTRTGNVLNEQVLSDDLQKIT
HHCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ELYRKEGYYLAKVNYRLEDRQSGRGAVLVINVDEGNKLYVKEVNIEGLNKLSRGDLDKYL
HHHHHCCEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECHHHHCHHCCCCCCCEE
ALKPRGIFSWLTGSGVLKEEYLERDTNAIAAYGLNEGYIDIQVGAPQVDYKDDGIYVTFV
EECCCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
VNEGPRYTVRNVVFAGDVIDSEDNMLEVVQMDDWKKSNDYFSLTVMQEDSKRLTDHYADY
ECCCCCEEEEEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHC
GYAFAEVDTKLIKAEDGSDQVDVGYLINKKQKVFIRRLVVEGNTKTRDNVILREMRLGDG
CEEEEECCEEEEEECCCCCCEEEEEEECCHHHEEEEEHEECCCCCCCCCEEEEEEECCCC
DMYEGAKLRRSNERLNRLRYFSVVDMELIPTGQEDEVDLKVKVKETNTGAIMGGIGYSSY
CCCCCHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCE
YDVGVTASIMERNLFGRGYWLQLQGFFSWRRTSGTLSFTNPRVYDTDLSFGNDIYYTHDY
ECCCCCHHHHHHCCCCCEEEEEEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEECCH
WDNFTKDTIGDTVRFGYPIGEYTSVGVGYRLERYHLYDVADNSSPYIKDYKGINWTSAVS
HCCCCHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECCCCCCCHHHHC
GRILRDTTDSKERPTKGTIARLWAEYGGGGLGGTDNFVKSVADWQGFWSFNPQNTVHLRG
CCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEE
RVGGVFQNTSDRVPVFERFWVGGMDTIRGYSYSDLSPRDYKHGNEQIGGDRMAVGNLEYI
CCCCEECCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEE
WTFQKDLGLALVPFVDTGFNIDSKTMGDEWDRYIVASTGLELRWRSPMGDLRIAYGIPLV
EEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEECCCCH
QDYDKEMPPGRIEFSMGQFF
HHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKILRNILSNILCVTALVCAVQLMPREAGASQGPLVLVLPFQVNAGPEMPNAAQDVPQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
IADQLKQSGMRVVPMNTARQLQRSSGETIDLATARALGRQAGAQLVIYGSFNQLGDGFNM
HHHHHHHCCCEEEECCHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEEECHHHCCCCCCC
DTRLVPVQQGEAVPAGFERNSLVALSDCASTLAGRAAELTGASAAPAAPQSGDDGPGLVP
CEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCEEE
MGTPTAAKGGLADVQVRGMSVMDPDTVLMRLTIRKGDTPDAHAINEEVKRIWEMGYFSDV
CCCCCCCCCCCCEEEECCEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHH
QASLEGNVLVFTVVEKPRIDNIIVEGSKGVDQEDVIAAMGTRTGNVLNEQVLSDDLQKIT
HHCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ELYRKEGYYLAKVNYRLEDRQSGRGAVLVINVDEGNKLYVKEVNIEGLNKLSRGDLDKYL
HHHHHCCEEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECHHHHCHHCCCCCCCEE
ALKPRGIFSWLTGSGVLKEEYLERDTNAIAAYGLNEGYIDIQVGAPQVDYKDDGIYVTFV
EECCCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
VNEGPRYTVRNVVFAGDVIDSEDNMLEVVQMDDWKKSNDYFSLTVMQEDSKRLTDHYADY
ECCCCCEEEEEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHC
GYAFAEVDTKLIKAEDGSDQVDVGYLINKKQKVFIRRLVVEGNTKTRDNVILREMRLGDG
CEEEEECCEEEEEECCCCCCEEEEEEECCHHHEEEEEHEECCCCCCCCCEEEEEEECCCC
DMYEGAKLRRSNERLNRLRYFSVVDMELIPTGQEDEVDLKVKVKETNTGAIMGGIGYSSY
CCCCCHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCE
YDVGVTASIMERNLFGRGYWLQLQGFFSWRRTSGTLSFTNPRVYDTDLSFGNDIYYTHDY
ECCCCCHHHHHHCCCCCEEEEEEEEEEEEEECCCEEEECCCEEEECCCCCCCEEEEECCH
WDNFTKDTIGDTVRFGYPIGEYTSVGVGYRLERYHLYDVADNSSPYIKDYKGINWTSAVS
HCCCCHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECCCCCCCHHHHC
GRILRDTTDSKERPTKGTIARLWAEYGGGGLGGTDNFVKSVADWQGFWSFNPQNTVHLRG
CCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEE
RVGGVFQNTSDRVPVFERFWVGGMDTIRGYSYSDLSPRDYKHGNEQIGGDRMAVGNLEYI
CCCCEECCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEE
WTFQKDLGLALVPFVDTGFNIDSKTMGDEWDRYIVASTGLELRWRSPMGDLRIAYGIPLV
EEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEECCCCH
QDYDKEMPPGRIEFSMGQFF
HHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]