| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is fur [H]
Identifier: 220903878
GI number: 220903878
Start: 730348
End: 730812
Strand: Direct
Name: fur [H]
Synonym: Ddes_0603
Alternate gene names: 220903878
Gene position: 730348-730812 (Clockwise)
Preceding gene: 220903876
Following gene: 220903879
Centisome position: 25.42
GC content: 54.41
Gene sequence:
>465_bases ATGACAGCAACACAGCTTAACGCCTGCCTGGCGGACTTTCTGGAGTTCATGAACCGCAAGGGCCTGAACACCACATCGCA ACGGCGCATCATAGCCGAAGCCTTTTTTGAGCTGCCGGGCCACCACTCTCTTGAAGAGTTTTATCAACACATCCTGCAGC GCGATCCGGGTATCGGGCAAACTACAGTATACCGTACCCTCAAGCTGCTCTGTGACGCCGGTATGGCTATGGAAATTCAC TTCAGCGACGGAATCACCCGCTATGAAGTAGCCAGGCCCGACAGTCACCACGACCATCTGGTCTGTCTGCAGTGCGGCAA GATCGTGGAAATCTGCGATCCACGCATTGAAACACTTCAGCGTGAAATGGCCGAAAAATACGGCTTCAGGCTGCGGGGCC ATGTACACAACCTGTACGGCCTGTGCGAAATGTGCCGTACCCAGGCCGCTGAAGAAGACAAGTAA
Upstream 100 bases:
>100_bases ATCTGAACATTTCAACATAACGGGCTCGAAAAACTCGCGCTTTGTTTTTCTTGGCATGAACGTGGAAAATATTTTACATT GCTCCCGGGGGTAGGCAATT
Downstream 100 bases:
>100_bases GAGTTTCATGCGGTTGCGGCAGGGGTGCAGTCTGCGTACCGCATGAAACTGCTTGCTGCTGGCGCAACAGGCTCGCCTGT TGCGGTCCCTTACGCAGCCG
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTATQLNACLADFLEFMNRKGLNTTSQRRIIAEAFFELPGHHSLEEFYQHILQRDPGIGQTTVYRTLKLLCDAGMAMEIH FSDGITRYEVARPDSHHDHLVCLQCGKIVEICDPRIETLQREMAEKYGFRLRGHVHNLYGLCEMCRTQAAEEDK
Sequences:
>Translated_154_residues MTATQLNACLADFLEFMNRKGLNTTSQRRIIAEAFFELPGHHSLEEFYQHILQRDPGIGQTTVYRTLKLLCDAGMAMEIH FSDGITRYEVARPDSHHDHLVCLQCGKIVEICDPRIETLQREMAEKYGFRLRGHVHNLYGLCEMCRTQAAEEDK >Mature_153_residues TATQLNACLADFLEFMNRKGLNTTSQRRIIAEAFFELPGHHSLEEFYQHILQRDPGIGQTTVYRTLKLLCDAGMAMEIHF SDGITRYEVARPDSHHDHLVCLQCGKIVEICDPRIETLQREMAEKYGFRLRGHVHNLYGLCEMCRTQAAEEDK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=127, Percent_Identity=40.9448818897638, Blast_Score=94, Evalue=4e-21,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17758; Mature: 17626
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATQLNACLADFLEFMNRKGLNTTSQRRIIAEAFFELPGHHSLEEFYQHILQRDPGIGQ CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH TTVYRTLKLLCDAGMAMEIHFSDGITRYEVARPDSHHDHLVCLQCGKIVEICDPRIETLQ HHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEHHCCHHHHHCHHHHHHH REMAEKYGFRLRGHVHNLYGLCEMCRTQAAEEDK HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TATQLNACLADFLEFMNRKGLNTTSQRRIIAEAFFELPGHHSLEEFYQHILQRDPGIGQ CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH TTVYRTLKLLCDAGMAMEIHFSDGITRYEVARPDSHHDHLVCLQCGKIVEICDPRIETLQ HHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEHHCCHHHHHCHHHHHHH REMAEKYGFRLRGHVHNLYGLCEMCRTQAAEEDK HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]