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The map label for this gene is yvmB [H]

Identifier: 220903874

GI number: 220903874

Start: 724629

End: 725153

Strand: Direct

Name: yvmB [H]

Synonym: Ddes_0599

Alternate gene names: 220903874

Gene position: 724629-725153 (Clockwise)

Preceding gene: 220903872

Following gene: 220903876

Centisome position: 25.22

GC content: 57.71

Gene sequence:

>525_bases
ATGTCTGAAAAAGAACAGTTAAGGCAGAGAGTTATCAACGGTCTTGTGCATCTTTCCCAGAGGATGGAAGAAGTGAACGG
GCTGTTTGACAAGGCCGGCAACAATCTTGCGCAGGTGGAGCTTGGCGGGCTGATTTTGACAGAAATGCACTTTCTGGCCC
TTATTGCAGGCGATGAGCCGGTCAACGGTGTCGCCGCAGCCAGAAAACTGGGGATGACGCGGGGCGGTATTTCAAAAATG
GCGGCCAGGTTGCAGGTGGGGGGCTTTGTTCAACCGCGCAGGCTCCCCGGCGATAAGAAAAGCCTGTTGTACGAGCTGAC
GGACAAGGGGCGGCGGGCTGCGGACATGCACCGCACACTGCACAATCTGGCAGAAGATCTTTTATGGGAGCGCCTCAAGG
CCAGCCCGGAAGAAGAGCTGGAGCGCTTTGCCCGCATGCTGGCCCGCACGGCAGAGGCCCTGGGCGAAGCAAACAGGCAG
GTGCGCATCAATGCCACGGCCCTGCTGGCGGGTGAAAAAAAATAG

Upstream 100 bases:

>100_bases
TACTCCATATTTGTTTCCCGGGAAACAATGTAGGCATGTTTTGCTTCCTGGTCAACAAAAAGATGTTACACTGTTGCCCG
AGCAAGCACAGGGAGAGGAT

Downstream 100 bases:

>100_bases
TCCCTCCGGGGGGAGGGACCTGATGGATTGCGGCGTTTGCGGTTAGTGGCGGATCGCCCGAAATGCCCTGTTACTGCATT
TCACTATGCGGCTGCACATG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSEKEQLRQRVINGLVHLSQRMEEVNGLFDKAGNNLAQVELGGLILTEMHFLALIAGDEPVNGVAAARKLGMTRGGISKM
AARLQVGGFVQPRRLPGDKKSLLYELTDKGRRAADMHRTLHNLAEDLLWERLKASPEEELERFARMLARTAEALGEANRQ
VRINATALLAGEKK

Sequences:

>Translated_174_residues
MSEKEQLRQRVINGLVHLSQRMEEVNGLFDKAGNNLAQVELGGLILTEMHFLALIAGDEPVNGVAAARKLGMTRGGISKM
AARLQVGGFVQPRRLPGDKKSLLYELTDKGRRAADMHRTLHNLAEDLLWERLKASPEEELERFARMLARTAEALGEANRQ
VRINATALLAGEKK
>Mature_173_residues
SEKEQLRQRVINGLVHLSQRMEEVNGLFDKAGNNLAQVELGGLILTEMHFLALIAGDEPVNGVAAARKLGMTRGGISKMA
ARLQVGGFVQPRRLPGDKKSLLYELTDKGRRAADMHRTLHNLAEDLLWERLKASPEEELERFARMLARTAEALGEANRQV
RINATALLAGEKK

Specific function: Involved in protein secretion [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19292; Mature: 19160

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKEQLRQRVINGLVHLSQRMEEVNGLFDKAGNNLAQVELGGLILTEMHFLALIAGDEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC
VNGVAAARKLGMTRGGISKMAARLQVGGFVQPRRLPGDKKSLLYELTDKGRRAADMHRTL
CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
HNLAEDLLWERLKASPEEELERFARMLARTAEALGEANRQVRINATALLAGEKK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHEEECCCCC
>Mature Secondary Structure 
SEKEQLRQRVINGLVHLSQRMEEVNGLFDKAGNNLAQVELGGLILTEMHFLALIAGDEP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC
VNGVAAARKLGMTRGGISKMAARLQVGGFVQPRRLPGDKKSLLYELTDKGRRAADMHRTL
CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
HNLAEDLLWERLKASPEEELERFARMLARTAEALGEANRQVRINATALLAGEKK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]