| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903870
Identifier: 220903870
GI number: 220903870
Start: 720681
End: 721967
Strand: Direct
Name: 220903870
Synonym: Ddes_0595
Alternate gene names: NA
Gene position: 720681-721967 (Clockwise)
Preceding gene: 220903867
Following gene: 220903871
Centisome position: 25.08
GC content: 62.24
Gene sequence:
>1287_bases GTGAACATTACCTGCCCGCGTTGCGGCTTCAGCCGCCAAGTGCCCGCCGACCGTCTGCCTGCGCGCGCGGTCATCGCCAC CTGCCCCCATTGCGCCTGCCGCTTCCGTTTCGGGCCGTCCACGGGGGAACACGAAGTTCTGCCGGACGCGCCACAGGCGG AGCAGCAGGAAACCGCACACGGGGGCAATGCCGGTACACCTGCTGCTTCGGCTCAGGATGCCGCGCCAGATGTGGATGGA CCTTCTCCTGCGCGCGGCCCTGAAGAAGATGATCCGCTGCCCCCCGGCGCCATTGTGCCGGGTTCCTCTCCCGGGACTTC CGGCCGGTCGGGTCGGGCAGGACAGGAAGCGCACGAGGAGTACAGCAGCAGGGAAGAAACTTCTGCGGGCGAAACGCGGC CTTTTGACCCGCGCAGCGCCAGAGGGGAAGAACATGCTGAGGAAGACCCCCGTGCCGCAGCCAGCCGCGCCTATGAACGT GAATACGGGCGCTATGGAACCAGGGGCGGCGCGGGAGGCGAGAACGGCAGCGTACATGACGACCGTGACATACATGACGC CCACGGTGCCCGTAATGAGCGTAATGCCCGTAACGAGTATGGCCGTAACGCCGAAGACGGGGGGGATCCCTATGGCGGAC ACGGCTATGATGACGAATATGACCATGCGGAAAGCGGCATCCCCTGGGAAACAGCCCCCGAACCGGATGGGTGGATAGCG GCATTTTACCAGACCTGCATGCGGGTCATGTTCGGAGCGCAACGCTTTTTCAGTCAGGTGCAGCCCGGTTCGCCGCAGAT GCGCGCCCTGATTTTCTATCTGCTGGTGAGTGTGGTACAGGTTGTTGTGGAACGTGTCTGGTCGGGTGTGTTCATGTCGC TCATGGCCCCCAGTGCCGCCTCGGACCCGCAGCTTGAAAAGATGCTGGTCATGCTTTCGCCGCAGATGAGCCTGCCGATG GTCATGCTTATAAAAACGGGCATGTCCGTCATTCAGCTGTATGTGCTCAGCGCACTCATAAATTTTACCTATGGCTTTGT GCGCGGCAACCGCACCGACTTCAGCCAGGTGTTTCAGGTGATGGCCTATTCCGCAGCGCCCACCCTGCTGTGTGTGGTTC CCCTGCTGGGGTCTCTTGTGGGTTTTGTCTGGATGGTGGCCTGCGTGCTGATAGGCTGCCGCGCGGCCCTCAAGCTTACC TGGCCGCAGACCCTTATGGGGCTTGCTCCGGTGGTGCTACTGCTCGCCCCCCTGATTTTGCAGATTTTTCAGGCGGCACG GATGTAG
Upstream 100 bases:
>100_bases GGCGCGGCAAGGGCAGCGGCGGCCCCTTGCCAGCACCGGGGCCTGCAGATAGTATAAAAAGGATTCGTGCCCATCTTTTG AGTTTACCGAGGAGAGTCTA
Downstream 100 bases:
>100_bases GCCTGAAGCATGGCGTTTGCCCCCAATAGGCATCGCCGCCCGGCTGTTTCTTTGTGGACGGCCGGGCGGCGATACTTTTC AGCGCCGGTCGGCGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MNITCPRCGFSRQVPADRLPARAVIATCPHCACRFRFGPSTGEHEVLPDAPQAEQQETAHGGNAGTPAASAQDAAPDVDG PSPARGPEEDDPLPPGAIVPGSSPGTSGRSGRAGQEAHEEYSSREETSAGETRPFDPRSARGEEHAEEDPRAAASRAYER EYGRYGTRGGAGGENGSVHDDRDIHDAHGARNERNARNEYGRNAEDGGDPYGGHGYDDEYDHAESGIPWETAPEPDGWIA AFYQTCMRVMFGAQRFFSQVQPGSPQMRALIFYLLVSVVQVVVERVWSGVFMSLMAPSAASDPQLEKMLVMLSPQMSLPM VMLIKTGMSVIQLYVLSALINFTYGFVRGNRTDFSQVFQVMAYSAAPTLLCVVPLLGSLVGFVWMVACVLIGCRAALKLT WPQTLMGLAPVVLLLAPLILQIFQAARM
Sequences:
>Translated_428_residues MNITCPRCGFSRQVPADRLPARAVIATCPHCACRFRFGPSTGEHEVLPDAPQAEQQETAHGGNAGTPAASAQDAAPDVDG PSPARGPEEDDPLPPGAIVPGSSPGTSGRSGRAGQEAHEEYSSREETSAGETRPFDPRSARGEEHAEEDPRAAASRAYER EYGRYGTRGGAGGENGSVHDDRDIHDAHGARNERNARNEYGRNAEDGGDPYGGHGYDDEYDHAESGIPWETAPEPDGWIA AFYQTCMRVMFGAQRFFSQVQPGSPQMRALIFYLLVSVVQVVVERVWSGVFMSLMAPSAASDPQLEKMLVMLSPQMSLPM VMLIKTGMSVIQLYVLSALINFTYGFVRGNRTDFSQVFQVMAYSAAPTLLCVVPLLGSLVGFVWMVACVLIGCRAALKLT WPQTLMGLAPVVLLLAPLILQIFQAARM >Mature_428_residues MNITCPRCGFSRQVPADRLPARAVIATCPHCACRFRFGPSTGEHEVLPDAPQAEQQETAHGGNAGTPAASAQDAAPDVDG PSPARGPEEDDPLPPGAIVPGSSPGTSGRSGRAGQEAHEEYSSREETSAGETRPFDPRSARGEEHAEEDPRAAASRAYER EYGRYGTRGGAGGENGSVHDDRDIHDAHGARNERNARNEYGRNAEDGGDPYGGHGYDDEYDHAESGIPWETAPEPDGWIA AFYQTCMRVMFGAQRFFSQVQPGSPQMRALIFYLLVSVVQVVVERVWSGVFMSLMAPSAASDPQLEKMLVMLSPQMSLPM VMLIKTGMSVIQLYVLSALINFTYGFVRGNRTDFSQVFQVMAYSAAPTLLCVVPLLGSLVGFVWMVACVLIGCRAALKLT WPQTLMGLAPVVLLLAPLILQIFQAARM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46205; Mature: 46205
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITCPRCGFSRQVPADRLPARAVIATCPHCACRFRFGPSTGEHEVLPDAPQAEQQETAH CCCCCCCCCCCCCCCHHHCCHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHC GGNAGTPAASAQDAAPDVDGPSPARGPEEDDPLPPGAIVPGSSPGTSGRSGRAGQEAHEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH YSSREETSAGETRPFDPRSARGEEHAEEDPRAAASRAYEREYGRYGTRGGAGGENGSVHD HHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DRDIHDAHGARNERNARNEYGRNAEDGGDPYGGHGYDDEYDHAESGIPWETAPEPDGWIA CCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHH AFYQTCMRVMFGAQRFFSQVQPGSPQMRALIFYLLVSVVQVVVERVWSGVFMSLMAPSAA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDPQLEKMLVMLSPQMSLPMVMLIKTGMSVIQLYVLSALINFTYGFVRGNRTDFSQVFQV CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MAYSAAPTLLCVVPLLGSLVGFVWMVACVLIGCRAALKLTWPQTLMGLAPVVLLLAPLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH QIFQAARM HHHHHHCC >Mature Secondary Structure MNITCPRCGFSRQVPADRLPARAVIATCPHCACRFRFGPSTGEHEVLPDAPQAEQQETAH CCCCCCCCCCCCCCCHHHCCHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHC GGNAGTPAASAQDAAPDVDGPSPARGPEEDDPLPPGAIVPGSSPGTSGRSGRAGQEAHEE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH YSSREETSAGETRPFDPRSARGEEHAEEDPRAAASRAYEREYGRYGTRGGAGGENGSVHD HHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DRDIHDAHGARNERNARNEYGRNAEDGGDPYGGHGYDDEYDHAESGIPWETAPEPDGWIA CCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHH AFYQTCMRVMFGAQRFFSQVQPGSPQMRALIFYLLVSVVQVVVERVWSGVFMSLMAPSAA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDPQLEKMLVMLSPQMSLPMVMLIKTGMSVIQLYVLSALINFTYGFVRGNRTDFSQVFQV CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH MAYSAAPTLLCVVPLLGSLVGFVWMVACVLIGCRAALKLTWPQTLMGLAPVVLLLAPLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHH QIFQAARM HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA