| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903853
Identifier: 220903853
GI number: 220903853
Start: 696422
End: 697276
Strand: Reverse
Name: 220903853
Synonym: Ddes_0577
Alternate gene names: NA
Gene position: 697276-696422 (Counterclockwise)
Preceding gene: 220903854
Following gene: 220903852
Centisome position: 24.27
GC content: 60.94
Gene sequence:
>855_bases ATGGATGTGAAAGAAAACGGACGTCGCAGTTTCATAAAATCGCTGGCCCTGGGGGCTGCCGGAGCTGCGGTCATCGCTCC CCGGGCTGCCGCCGCGGCAACAGGCGGCACGCTCCAGGTCTGGTCGTGCGGCGGTCTTGCCGAGGCCATGTGTCCGGCAC ATGAGGAGTACACCAGTCAATCCGGCGTCAATATCGTCTATACCGGCGCTTTTGCCGCAGCCCTCGGCAAATCCCTGCTC ACGGGCAGCGGACACACCGAGGTTTTTGCCGGACGGGTGCTTGCCCTCGCGCAGAACCTGCGCAAGGCGGGGAAAATGCT CAGTTTTCGCCCCCTGTGCTTTACAAGCTACGTCATCGCCGTCCCCAGGGGCAATCCGGCCCGAATACAGGCTCTTGATG ACCTCGCCCGCCCCGGCGTGCGCGTTGCCATGGCCAAAGACGCTTCCGCCCCCGGCGGCCAGGCGGTTATGGGGCTGCTC AAGGCATCTGGCCTCACACAGCAGGTACTGACAAATGTGCCTGAGCAGGGAACCTGCGTGCAGCGTTCTGTAGAAAACGT CACCAGTGGCAATGCCGATGCAATGATCGTCGAGCGGCGCATATGCCGCATGCAGCGCTTTGCCGATCATCTGGACGTGG TCGAGATCCCGGAGAAATTTTTTCCTGCCGGGCCGTTGACCTTCACAGTGGGGCTTATGGCGGACGCTGCGGATAAAAAC ATGGCTGCCGCCTACATAGACTGGCTGACCGGGCCACAGGGCCAGGCCTTTTTTGAACATGCCGGGTTCATCCCCGCCCT TTCCAGTAAGGGCCAGGAAATGATCGAAAAGCTGGGGGTCAAAGATGTTGCATGA
Upstream 100 bases:
>100_bases GTGCGAACGCGGTTTTTCCATGAGTGTACAACTGTTCGCCTGCAAGCCCCTCACGGCTGCGGCAAGCCATCGGTTCCAAC ATATGTTTATGGAGGCTGTT
Downstream 100 bases:
>100_bases AATAGTCGCCAGGCCCAGCGTCAAACTGCGGATGCTGCATTGGTGTAACAGGGCGGCGCTTTTTGCCTCTACCCTCTTTA TCGGTGAATGGGGGCTGTAC
Product: putative molybdenum ABC transporter solute-binding protein
Products: NA
Alternate protein names: Molybdate ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MDVKENGRRSFIKSLALGAAGAAVIAPRAAAAATGGTLQVWSCGGLAEAMCPAHEEYTSQSGVNIVYTGAFAAALGKSLL TGSGHTEVFAGRVLALAQNLRKAGKMLSFRPLCFTSYVIAVPRGNPARIQALDDLARPGVRVAMAKDASAPGGQAVMGLL KASGLTQQVLTNVPEQGTCVQRSVENVTSGNADAMIVERRICRMQRFADHLDVVEIPEKFFPAGPLTFTVGLMADAADKN MAAAYIDWLTGPQGQAFFEHAGFIPALSSKGQEMIEKLGVKDVA
Sequences:
>Translated_284_residues MDVKENGRRSFIKSLALGAAGAAVIAPRAAAAATGGTLQVWSCGGLAEAMCPAHEEYTSQSGVNIVYTGAFAAALGKSLL TGSGHTEVFAGRVLALAQNLRKAGKMLSFRPLCFTSYVIAVPRGNPARIQALDDLARPGVRVAMAKDASAPGGQAVMGLL KASGLTQQVLTNVPEQGTCVQRSVENVTSGNADAMIVERRICRMQRFADHLDVVEIPEKFFPAGPLTFTVGLMADAADKN MAAAYIDWLTGPQGQAFFEHAGFIPALSSKGQEMIEKLGVKDVA >Mature_284_residues MDVKENGRRSFIKSLALGAAGAAVIAPRAAAAATGGTLQVWSCGGLAEAMCPAHEEYTSQSGVNIVYTGAFAAALGKSLL TGSGHTEVFAGRVLALAQNLRKAGKMLSFRPLCFTSYVIAVPRGNPARIQALDDLARPGVRVAMAKDASAPGGQAVMGLL KASGLTQQVLTNVPEQGTCVQRSVENVTSGNADAMIVERRICRMQRFADHLDVVEIPEKFFPAGPLTFTVGLMADAADKN MAAAYIDWLTGPQGQAFFEHAGFIPALSSKGQEMIEKLGVKDVA
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29739; Mature: 29739
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKENGRRSFIKSLALGAAGAAVIAPRAAAAATGGTLQVWSCGGLAEAMCPAHEEYTSQ CCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCEEEEEECCCHHHHHCCCHHHHHCC SGVNIVYTGAFAAALGKSLLTGSGHTEVFAGRVLALAQNLRKAGKMLSFRPLCFTSYVIA CCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEE VPRGNPARIQALDDLARPGVRVAMAKDASAPGGQAVMGLLKASGLTQQVLTNVPEQGTCV ECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHH QRSVENVTSGNADAMIVERRICRMQRFADHLDVVEIPEKFFPAGPLTFTVGLMADAADKN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCEEEHHHHHCCCCCC MAAAYIDWLTGPQGQAFFEHAGFIPALSSKGQEMIEKLGVKDVA HHHHHHHHHCCCCCCHHHHHCCCCCCHHCCHHHHHHHCCCCCCC >Mature Secondary Structure MDVKENGRRSFIKSLALGAAGAAVIAPRAAAAATGGTLQVWSCGGLAEAMCPAHEEYTSQ CCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCEEEEEECCCHHHHHCCCHHHHHCC SGVNIVYTGAFAAALGKSLLTGSGHTEVFAGRVLALAQNLRKAGKMLSFRPLCFTSYVIA CCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEE VPRGNPARIQALDDLARPGVRVAMAKDASAPGGQAVMGLLKASGLTQQVLTNVPEQGTCV ECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHH QRSVENVTSGNADAMIVERRICRMQRFADHLDVVEIPEKFFPAGPLTFTVGLMADAADKN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHCCCCCCEEEHHHHHCCCCCC MAAAYIDWLTGPQGQAFFEHAGFIPALSSKGQEMIEKLGVKDVA HHHHHHHHHCCCCCCHHHHHCCCCCCHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA