| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is pstS1 [H]
Identifier: 220903842
GI number: 220903842
Start: 685007
End: 685855
Strand: Reverse
Name: pstS1 [H]
Synonym: Ddes_0566
Alternate gene names: 220903842
Gene position: 685855-685007 (Counterclockwise)
Preceding gene: 220903848
Following gene: 220903841
Centisome position: 23.87
GC content: 58.66
Gene sequence:
>849_bases ATGTCTTTTGATTGCAAAAAACGCGTTTCCCGTTACAGCAGCAGGCTCGCGGCCTGCGCTCTGGCCGTGCTTTGCTGGAG CGCTTCGGCCTTCGCCGCCCAGCAGGTCATCATCAACGGCTCCACCACCGTGCTGCCCGTGGTGCAAAAAGCCGGAGAAG CCTTCATGGCCTCTCACCCCGGCACGGAGCTGAGCATTTCCGGCGGCGGTTCCGGCAACGGCATCAAGGCTCTCATTGAA AAGCAGTGCGATGTAGCCATGAGCTCGCGCGACATCAAGGACAAGGAAAAGGACGCCGCCGCCAAAAACGGCATTACGCC CCTGCGCACGGCCATCGCTATTGACGCCATTGTGCCTGTGGTCCACCCGGCCAACAAGGTGGGCGCTCTTACCCTTGCGC AGCTGCGCGACATCTACACAGGAAAAGTCACCAACTGGAAGGATCTTGGCGGCGAAGACGCCCAGATTGTAGCCATCTCG CGCGACACTTCTTCCGGAACGTTTGAATCCTGGGAAGAACTTGTCATGAACAAGGAGCGCGTCAGCCCCAGAGCGCTCAT GCAGGCTTCCAACGGATCCGTGGTGCAGACTGTAAGCAAAAACAAAAACGCCATCGGCTATGTAGGCCTGGGCTATGTGG ACAAGTCCACCAGGCCTGTGACGGTTGACGGCGTAAGCCCCAGCGCAGAGACCGCCATTTCAAAGCAGTGGCCCATCGCG CGTGAACTGTACATTTTCACCAACGGTGCACCCCAGGGCGCGGTGAAAGAGTTTGTGGAATATCTGGTGGCCCCCGACAA GGGACAAAAGGATGTGCTCGCCGTGGGCTACGTACCCCTGAGCAAATAG
Upstream 100 bases:
>100_bases TCCGTCATCATTCTGTAACAGAGGCGGGCCAAAAGAAAGACACGGCAAAAAGATGCCGCGGGTGAAATGTTCTCACCATA GATAAAACCAGGAGAAACTC
Downstream 100 bases:
>100_bases GCGCCAGAAGAAAAATCCTTGCAGGGCGCGGGCAGGACGGATACCGCAAACCGGCCTGCCCCGCCTGTGCGGCACAGTGC AATGGACGCAGCCAACGCGT
Product: phosphate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHPGTELSISGGGSGNGIKALIE KQCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPVVHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAIS RDTSSGTFESWEELVMNKERVSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIA RELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK
Sequences:
>Translated_282_residues MSFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHPGTELSISGGGSGNGIKALIE KQCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPVVHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAIS RDTSSGTFESWEELVMNKERVSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIA RELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK >Mature_281_residues SFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHPGTELSISGGGSGNGIKALIEK QCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPVVHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAISR DTSSGTFESWEELVMNKERVSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIAR ELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29891; Mature: 29760
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHP CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHCCCHHHHCCC GTELSISGGGSGNGIKALIEKQCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPV CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHC VHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAISRDTSSGTFESWEELVMNKER CCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHC VSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIA CCHHHHHCCCCCCEEEEECCCCCCEEEEEECEECCCCCCEEEECCCCCHHHHHHCCCCCE RELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK EEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECEECCC >Mature Secondary Structure SFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHP CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHCCCHHHHCCC GTELSISGGGSGNGIKALIEKQCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPV CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHC VHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAISRDTSSGTFESWEELVMNKER CCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHC VSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIA CCHHHHHCCCCCCEEEEECCCCCCEEEEEECEECCCCCCEEEECCCCCHHHHHHCCCCCE RELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK EEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]